RNA–Protein interactions for RNA: ENST00000266058.8

SLIT1-201, Transcript of slit guidance ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLIT1, Length 7,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-201ENST00000266058 NPHP1O15259 732 aa18.85■□□□□ 0.61
SLIT1-201ENST00000266058 C14orf37Q86TY3 774 aa18.85■□□□□ 0.61
SLIT1-201ENST00000266058 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
SLIT1-201ENST00000266058 CHIC2Q9UKJ5 165 aa18.84■□□□□ 0.61
SLIT1-201ENST00000266058 KDM2AQ9Y2K7 1162 aa18.81■□□□□ 0.6
SLIT1-201ENST00000266058 PTMAP06454 111 aaKnown RBP18.8■□□□□ 0.6
SLIT1-201ENST00000266058 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
SLIT1-201ENST00000266058 NCLP19338 710 aaKnown RBP18.8■□□□□ 0.6
SLIT1-201ENST00000266058 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
SLIT1-201ENST00000266058 MYH16Q9H6N6 1097 aa18.75■□□□□ 0.59
SLIT1-201ENST00000266058 HIRIP3Q9BW71 556 aaPredicted RBP18.75■□□□□ 0.59
SLIT1-201ENST00000266058 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
SLIT1-201ENST00000266058 PLCB2Q00722 1185 aa18.68■□□□□ 0.58
SLIT1-201ENST00000266058 MIER1Q8N108 512 aa18.66■□□□□ 0.58
SLIT1-201ENST00000266058 BECN1Q14457 450 aa18.62■□□□□ 0.57
SLIT1-201ENST00000266058 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
SLIT1-201ENST00000266058 NAP1L5Q96NT1 182 aaPredicted RBP18.62■□□□□ 0.57
SLIT1-201ENST00000266058 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
SLIT1-201ENST00000266058 TSPY4P0CV99 314 aa18.58■□□□□ 0.57
SLIT1-201ENST00000266058 TSPY10P0CW01 314 aa18.58■□□□□ 0.57
SLIT1-201ENST00000266058 FBXO3Q9UK99 471 aa18.58■□□□□ 0.57
SLIT1-201ENST00000266058 GOLGA6L22H0YM25 854 aa18.55■□□□□ 0.56
SLIT1-201ENST00000266058 PDE4CQ08493 712 aa18.54■□□□□ 0.56
SLIT1-201ENST00000266058 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
SLIT1-201ENST00000266058 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
SLIT1-201ENST00000266058 KRI1Q8N9T8 703 aaKnown RBP18.53■□□□□ 0.56
SLIT1-201ENST00000266058 RTN4Q9NQC3 1192 aaKnown RBP18.53■□□□□ 0.56
SLIT1-201ENST00000266058 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.55
SLIT1-201ENST00000266058 NAP1L2Q9ULW6 460 aaPredicted RBP18.52■□□□□ 0.55
SLIT1-201ENST00000266058 NOC3LQ8WTT2 800 aaKnown RBP18.51■□□□□ 0.55
SLIT1-201ENST00000266058 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
SLIT1-201ENST00000266058 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
SLIT1-201ENST00000266058 ANO8Q9HCE9 1232 aaPredicted RBP18.49■□□□□ 0.55
SLIT1-201ENST00000266058 ANP32EQ9BTT0 268 aa18.47■□□□□ 0.55
SLIT1-201ENST00000266058 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
SLIT1-201ENST00000266058 ERICH6BQ5W0A0 696 aa18.46■□□□□ 0.55
SLIT1-201ENST00000266058 GOLGA6L6A8MZA4 724 aa18.46■□□□□ 0.55
SLIT1-201ENST00000266058 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
SLIT1-201ENST00000266058 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
SLIT1-201ENST00000266058 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
SLIT1-201ENST00000266058 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
SLIT1-201ENST00000266058 RGL3Q3MIN7 710 aa18.44■□□□□ 0.54
SLIT1-201ENST00000266058 LMOD2Q6P5Q4 547 aa18.42■□□□□ 0.54
SLIT1-201ENST00000266058 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
SLIT1-201ENST00000266058 FTSJ3Q8IY81 847 aaKnown RBP18.42■□□□□ 0.54
SLIT1-201ENST00000266058 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
SLIT1-201ENST00000266058 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.54
SLIT1-201ENST00000266058 ARID3AQ99856 593 aa18.39■□□□□ 0.53
SLIT1-201ENST00000266058 FGD1P98174 961 aa18.38■□□□□ 0.53
SLIT1-201ENST00000266058 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
SLIT1-201ENST00000266058 CFAP53Q96M91 514 aa18.37■□□□□ 0.53
SLIT1-201ENST00000266058 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
SLIT1-201ENST00000266058 PNNQ9H307 717 aaKnown RBP18.36■□□□□ 0.53
SLIT1-201ENST00000266058 KNSTRNQ9Y448 316 aa18.35■□□□□ 0.53
SLIT1-201ENST00000266058 CHMP7Q8WUX9 453 aaPredicted RBP18.35■□□□□ 0.53
SLIT1-201ENST00000266058 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
SLIT1-201ENST00000266058 DRC7Q8IY82 874 aa18.34■□□□□ 0.53
SLIT1-201ENST00000266058 KIAA2012Q0VF49 1180 aa18.34■□□□□ 0.53
SLIT1-201ENST00000266058 RGS3P49796 1198 aa18.34■□□□□ 0.53
SLIT1-201ENST00000266058 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
SLIT1-201ENST00000266058 NRDCO43847 1150 aa18.32■□□□□ 0.52
SLIT1-201ENST00000266058 CLIP1P30622 1438 aa18.31■□□□□ 0.52
SLIT1-201ENST00000266058 TNNT3P45378 269 aaPredicted RBP18.3■□□□□ 0.52
SLIT1-201ENST00000266058 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
SLIT1-201ENST00000266058 MAPK8IP3Q9UPT6 1336 aa18.26■□□□□ 0.51
SLIT1-201ENST00000266058 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
SLIT1-201ENST00000266058 CARD11Q9BXL7 1154 aa18.26■□□□□ 0.51
SLIT1-201ENST00000266058 KCNJ4P48050 445 aa18.25■□□□□ 0.51
SLIT1-201ENST00000266058 CALRP27797 417 aaKnown RBP18.24■□□□□ 0.51
SLIT1-201ENST00000266058 CDCA8Q53HL2 280 aa18.24■□□□□ 0.51
SLIT1-201ENST00000266058 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
SLIT1-201ENST00000266058 NOP58Q9Y2X3 529 aaKnown RBP18.22■□□□□ 0.51
SLIT1-201ENST00000266058 OS9Q13438 667 aaPredicted RBP18.22■□□□□ 0.51
SLIT1-201ENST00000266058 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
SLIT1-201ENST00000266058 GOLGA6L4A6NEF3 574 aa18.2■□□□□ 0.5
SLIT1-201ENST00000266058 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
SLIT1-201ENST00000266058 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
SLIT1-201ENST00000266058 PLEKHD1A6NEE1 506 aa18.19■□□□□ 0.5
SLIT1-201ENST00000266058 PATL2C9JE40 543 aaKnown RBP18.18■□□□□ 0.5
SLIT1-201ENST00000266058 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
SLIT1-201ENST00000266058 NUDCQ9Y266 331 aa18.17■□□□□ 0.5
SLIT1-201ENST00000266058 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
SLIT1-201ENST00000266058 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.16■□□□□ 0.5
SLIT1-201ENST00000266058 GNL2Q13823 731 aaKnown RBP18.16■□□□□ 0.5
SLIT1-201ENST00000266058 WWC1Q8IX03 1113 aa18.16■□□□□ 0.5
SLIT1-201ENST00000266058 U2SURPO15042 1029 aaKnown RBP18.16■□□□□ 0.5
SLIT1-201ENST00000266058 MSNP26038 577 aaKnown RBP18.16■□□□□ 0.5
SLIT1-201ENST00000266058 POGKQ9P215 609 aa18.15■□□□□ 0.5
SLIT1-201ENST00000266058 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.49
SLIT1-201ENST00000266058 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
SLIT1-201ENST00000266058 TMX4Q9H1E5 349 aaPredicted RBP18.12■□□□□ 0.49
SLIT1-201ENST00000266058 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
SLIT1-201ENST00000266058 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
SLIT1-201ENST00000266058 HSCBQ8IWL3 235 aa18.1■□□□□ 0.49
SLIT1-201ENST00000266058 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
SLIT1-201ENST00000266058 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
SLIT1-201ENST00000266058 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
SLIT1-201ENST00000266058 GOLGA6L1Q8N7Z2 621 aa18.07■□□□□ 0.48
SLIT1-201ENST00000266058 CREBRFQ8IUR6 639 aa18.06■□□□□ 0.48
SLIT1-201ENST00000266058 MS4A1P11836 297 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 238.7 ms