RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 FHAD1B1AJZ9 1412 aa13.51□□□□□ -0.25
ABCB1-201ENST00000265724 MIER1Q8N108 512 aa13.5□□□□□ -0.25
ABCB1-201ENST00000265724 TDRD9Q8NDG6 1382 aaKnown RBP13.5□□□□□ -0.25
ABCB1-201ENST00000265724 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
ABCB1-201ENST00000265724 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
ABCB1-201ENST00000265724 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
ABCB1-201ENST00000265724 KANK4Q5T7N3 995 aaPredicted RBP13.48□□□□□ -0.25
ABCB1-201ENST00000265724 ESF1Q9H501 851 aaKnown RBP13.47□□□□□ -0.25
ABCB1-201ENST00000265724 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
ABCB1-201ENST00000265724 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
ABCB1-201ENST00000265724 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
ABCB1-201ENST00000265724 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
ABCB1-201ENST00000265724 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
ABCB1-201ENST00000265724 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
ABCB1-201ENST00000265724 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
ABCB1-201ENST00000265724 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
ABCB1-201ENST00000265724 MYT1Q01538 1121 aa13.39□□□□□ -0.27
ABCB1-201ENST00000265724 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
ABCB1-201ENST00000265724 FKBP8Q14318 412 aa13.38□□□□□ -0.27
ABCB1-201ENST00000265724 RGL3Q3MIN7 710 aa13.38□□□□□ -0.27
ABCB1-201ENST00000265724 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
ABCB1-201ENST00000265724 MRS2Q9HD23 443 aa13.36□□□□□ -0.27
ABCB1-201ENST00000265724 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
ABCB1-201ENST00000265724 NEFMP07197 916 aa13.36□□□□□ -0.27
ABCB1-201ENST00000265724 CANXP27824 592 aaKnown RBP13.36□□□□□ -0.27
ABCB1-201ENST00000265724 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
ABCB1-201ENST00000265724 ARHGAP35Q9NRY4 1499 aa13.32□□□□□ -0.28
ABCB1-201ENST00000265724 FMN1Q68DA7 1419 aa13.31□□□□□ -0.28
ABCB1-201ENST00000265724 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
ABCB1-201ENST00000265724 SETD5Q9C0A6 1442 aa13.29□□□□□ -0.28
ABCB1-201ENST00000265724 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
ABCB1-201ENST00000265724 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
ABCB1-201ENST00000265724 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
ABCB1-201ENST00000265724 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
ABCB1-201ENST00000265724 CARMIL2Q6F5E8 1435 aa13.27□□□□□ -0.29
ABCB1-201ENST00000265724 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
ABCB1-201ENST00000265724 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
ABCB1-201ENST00000265724 BCL11AQ9H165 835 aa13.25□□□□□ -0.29
ABCB1-201ENST00000265724 RAB3GAP2Q9H2M9 1393 aa13.25□□□□□ -0.29
ABCB1-201ENST00000265724 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
ABCB1-201ENST00000265724 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
ABCB1-201ENST00000265724 IGF1RP08069 1367 aa13.22□□□□□ -0.29
ABCB1-201ENST00000265724 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
ABCB1-201ENST00000265724 TIMELESSQ9UNS1 1208 aa13.22□□□□□ -0.29
ABCB1-201ENST00000265724 FOXD1Q16676 465 aa13.2□□□□□ -0.3
ABCB1-201ENST00000265724 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
ABCB1-201ENST00000265724 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
ABCB1-201ENST00000265724 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
ABCB1-201ENST00000265724 SENP3-EIF4A1A0A087X0R7 540 aa13.18□□□□□ -0.3
ABCB1-201ENST00000265724 DCAF11Q8TEB1 546 aa13.17□□□□□ -0.3
ABCB1-201ENST00000265724 PPP1R15AO75807 674 aaPredicted RBP13.16□□□□□ -0.3
ABCB1-201ENST00000265724 PKD2Q13563 968 aa13.16□□□□□ -0.3
ABCB1-201ENST00000265724 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
ABCB1-201ENST00000265724 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
ABCB1-201ENST00000265724 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
ABCB1-201ENST00000265724 GAPVD1Q14C86 1478 aa13.13□□□□□ -0.31
ABCB1-201ENST00000265724 ARID4BQ4LE39 1312 aaPredicted RBP13.12□□□□□ -0.31
ABCB1-201ENST00000265724 CDCA8Q53HL2 280 aa13.12□□□□□ -0.31
ABCB1-201ENST00000265724 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
ABCB1-201ENST00000265724 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
ABCB1-201ENST00000265724 CFTRP13569 1480 aa13.11□□□□□ -0.31
ABCB1-201ENST00000265724 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
ABCB1-201ENST00000265724 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
ABCB1-201ENST00000265724 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
ABCB1-201ENST00000265724 NUP155O75694 1391 aa13.1□□□□□ -0.31
ABCB1-201ENST00000265724 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
ABCB1-201ENST00000265724 CCDC18Q5T9S5 1454 aa13.09□□□□□ -0.31
ABCB1-201ENST00000265724 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
ABCB1-201ENST00000265724 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.09□□□□□ -0.31
ABCB1-201ENST00000265724 KANK1Q14678 1352 aa13.07□□□□□ -0.32
ABCB1-201ENST00000265724 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
ABCB1-201ENST00000265724 GGT6Q6P531 493 aa13.06□□□□□ -0.32
ABCB1-201ENST00000265724 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
ABCB1-201ENST00000265724 NESP48681 1621 aa13.05□□□□□ -0.32
ABCB1-201ENST00000265724 KIF21BO75037 1637 aa13.05□□□□□ -0.32
ABCB1-201ENST00000265724 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
ABCB1-201ENST00000265724 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
ABCB1-201ENST00000265724 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
ABCB1-201ENST00000265724 CC2D1BQ5T0F9 858 aaKnown RBP13.03□□□□□ -0.32
ABCB1-201ENST00000265724 TMF1P82094 1093 aa13.02□□□□□ -0.32
ABCB1-201ENST00000265724 HMGXB3Q12766 1538 aa13.02□□□□□ -0.32
ABCB1-201ENST00000265724 MLECQ14165 292 aa13.02□□□□□ -0.33
ABCB1-201ENST00000265724 POGKQ9P215 609 aa13.01□□□□□ -0.33
ABCB1-201ENST00000265724 PTPRGP23470 1445 aa13.01□□□□□ -0.33
ABCB1-201ENST00000265724 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
ABCB1-201ENST00000265724 CFAP53Q96M91 514 aa13□□□□□ -0.33
ABCB1-201ENST00000265724 PLEKHG5O94827 1062 aa13□□□□□ -0.33
ABCB1-201ENST00000265724 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
ABCB1-201ENST00000265724 PPM1GO15355 546 aaPredicted RBP12.99□□□□□ -0.33
ABCB1-201ENST00000265724 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
ABCB1-201ENST00000265724 CCER2I3L3R5 266 aa12.99□□□□□ -0.33
ABCB1-201ENST00000265724 KIF3BO15066 747 aa12.99□□□□□ -0.33
ABCB1-201ENST00000265724 C14orf37Q86TY3 774 aa12.98□□□□□ -0.33
ABCB1-201ENST00000265724 CUX1P39880 1505 aa12.98□□□□□ -0.33
ABCB1-201ENST00000265724 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
ABCB1-201ENST00000265724 NEUROD2Q15784 382 aa12.97□□□□□ -0.33
ABCB1-201ENST00000265724 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
ABCB1-201ENST00000265724 TOP2BQ02880 1626 aa12.97□□□□□ -0.33
ABCB1-201ENST00000265724 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
ABCB1-201ENST00000265724 PHLDB1Q86UU1 1377 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms