RNA–Protein interactions for RNA: ENST00000264932.10

SDHA-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHA, Length 2,390 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-201ENST00000264932 LRRC9Q6ZRR7 1453 aa28.57■■■□□ 2.16
SDHA-201ENST00000264932 RAB3GAP2Q9H2M9 1393 aa28.57■■■□□ 2.16
SDHA-201ENST00000264932 PHLDB1Q86UU1 1377 aa28.55■■■□□ 2.16
SDHA-201ENST00000264932 ATP1B4Q9UN42 357 aaPredicted RBP28.53■■■□□ 2.16
SDHA-201ENST00000264932 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
SDHA-201ENST00000264932 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
SDHA-201ENST00000264932 DNMBPQ6XZF7 1577 aa28.47■■■□□ 2.15
SDHA-201ENST00000264932 ABCA10Q8WWZ4 1543 aa28.47■■■□□ 2.15
SDHA-201ENST00000264932 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
SDHA-201ENST00000264932 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
SDHA-201ENST00000264932 FAM50AQ14320 339 aaKnown RBP28.47■■■□□ 2.15
SDHA-201ENST00000264932 FHOD3Q2V2M9 1422 aa28.45■■■□□ 2.15
SDHA-201ENST00000264932 SETD5Q9C0A6 1442 aa28.44■■■□□ 2.14
SDHA-201ENST00000264932 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
SDHA-201ENST00000264932 PCF11O94913 1555 aaKnown RBP28.43■■■□□ 2.14
SDHA-201ENST00000264932 CFAP43Q8NDM7 1665 aa28.34■■■□□ 2.13
SDHA-201ENST00000264932 SIN3AQ96ST3 1273 aa28.32■■■□□ 2.12
SDHA-201ENST00000264932 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
SDHA-201ENST00000264932 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
SDHA-201ENST00000264932 FYCO1Q9BQS8 1478 aa28.29■■■□□ 2.12
SDHA-201ENST00000264932 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
SDHA-201ENST00000264932 TDRD9Q8NDG6 1382 aaKnown RBP28.25■■■□□ 2.11
SDHA-201ENST00000264932 CUL7Q14999 1698 aa28.25■■■□□ 2.11
SDHA-201ENST00000264932 AQRO60306 1485 aaKnown RBP eCLIP28.24■■■□□ 2.111e-7■■■■■ 30.9
SDHA-201ENST00000264932 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
SDHA-201ENST00000264932 CTTNBP2Q8WZ74 1663 aa28.18■■■□□ 2.1
SDHA-201ENST00000264932 FMN1Q68DA7 1419 aa28.18■■■□□ 2.1
SDHA-201ENST00000264932 WDR97A6NE52 1622 aa28.15■■■□□ 2.1
SDHA-201ENST00000264932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.15■■■□□ 2.1
SDHA-201ENST00000264932 SNAPC4Q5SXM2 1469 aa28.14■■■□□ 2.1
SDHA-201ENST00000264932 KCNH8Q96L42 1107 aa28.12■■■□□ 2.09
SDHA-201ENST00000264932 FGD6Q6ZV73 1430 aa28.11■■■□□ 2.09
SDHA-201ENST00000264932 GAPVD1Q14C86 1478 aa28.1■■■□□ 2.09
SDHA-201ENST00000264932 MTUS2Q5JR59 1369 aa28.1■■■□□ 2.09
SDHA-201ENST00000264932 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
SDHA-201ENST00000264932 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
SDHA-201ENST00000264932 TIMELESSQ9UNS1 1208 aa28.06■■■□□ 2.08
SDHA-201ENST00000264932 DDX10Q13206 875 aaKnown RBP28.06■■■□□ 2.08
SDHA-201ENST00000264932 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
SDHA-201ENST00000264932 PTPRKQ15262 1439 aa28.04■■■□□ 2.08
SDHA-201ENST00000264932 PPP1R15AO75807 674 aaPredicted RBP28.04■■■□□ 2.08
SDHA-201ENST00000264932 SAMD9Q5K651 1589 aa28.02■■■□□ 2.08
SDHA-201ENST00000264932 HIRIP3Q9BW71 556 aaPredicted RBP28.01■■■□□ 2.07
SDHA-201ENST00000264932 GRIN2BQ13224 1484 aa27.98■■■□□ 2.07
SDHA-201ENST00000264932 SUPT16HQ9Y5B9 1047 aaKnown RBP27.97■■■□□ 2.07
SDHA-201ENST00000264932 LRRIQ1Q96JM4 1722 aa27.97■■■□□ 2.07
SDHA-201ENST00000264932 NCOA2Q15596 1464 aa27.96■■■□□ 2.07
SDHA-201ENST00000264932 CCDC18Q5T9S5 1454 aa27.94■■■□□ 2.06
SDHA-201ENST00000264932 HFM1A2PYH4 1435 aa27.93■■■□□ 2.06
SDHA-201ENST00000264932 MYOM3Q5VTT5 1437 aa27.92■■■□□ 2.06
SDHA-201ENST00000264932 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
SDHA-201ENST00000264932 NAIPQ13075 1403 aa27.87■■■□□ 2.05
SDHA-201ENST00000264932 UACAQ9BZF9 1416 aa27.87■■■□□ 2.05
SDHA-201ENST00000264932 PTPN23Q9H3S7 1636 aa27.85■■■□□ 2.05
SDHA-201ENST00000264932 TONSLQ96HA7 1378 aa27.85■■■□□ 2.05
SDHA-201ENST00000264932 MAGI3Q5TCQ9 1506 aa27.83■■■□□ 2.05
SDHA-201ENST00000264932 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
SDHA-201ENST00000264932 SUPT6HQ7KZ85 1726 aaKnown RBP27.81■■■□□ 2.04
SDHA-201ENST00000264932 EHBP1L1Q8N3D4 1523 aa27.81■■■□□ 2.04
SDHA-201ENST00000264932 UGGT2Q9NYU1 1516 aa27.78■■■□□ 2.04
SDHA-201ENST00000264932 RRP7BPQ9NSQ0 103 aa27.78■■■□□ 2.04
SDHA-201ENST00000264932 CHIC2Q9UKJ5 165 aa27.78■■■□□ 2.04
SDHA-201ENST00000264932 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
SDHA-201ENST00000264932 ARID3CA6NKF2 412 aa27.73■■■□□ 2.03
SDHA-201ENST00000264932 PBRM1Q86U86 1689 aa27.7■■■□□ 2.03
SDHA-201ENST00000264932 ANP32CO43423 234 aa27.69■■■□□ 2.02
SDHA-201ENST00000264932 EPRSP07814 1512 aaKnown RBP27.68■■■□□ 2.02
SDHA-201ENST00000264932 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
SDHA-201ENST00000264932 IQGAP2Q13576 1575 aa27.67■■■□□ 2.02
SDHA-201ENST00000264932 CCER2I3L3R5 266 aa27.66■■■□□ 2.02
SDHA-201ENST00000264932 TCOF1Q13428 1488 aaKnown RBP27.66■■■□□ 2.02
SDHA-201ENST00000264932 CDK13Q14004 1512 aaKnown RBP27.64■■■□□ 2.02
SDHA-201ENST00000264932 TRIM52Q96A61 297 aa27.64■■■□□ 2.01
SDHA-201ENST00000264932 KDM5BQ9UGL1 1544 aa27.63■■■□□ 2.01
SDHA-201ENST00000264932 HECW1Q76N89 1606 aa27.63■■■□□ 2.01
SDHA-201ENST00000264932 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
SDHA-201ENST00000264932 ADAMTS12P58397 1594 aa27.62■■■□□ 2.01
SDHA-201ENST00000264932 DENND4BO75064 1496 aaPredicted RBP27.61■■■□□ 2.01
SDHA-201ENST00000264932 KDM6BO15054 1643 aa27.56■■■□□ 2
SDHA-201ENST00000264932 WDR62O43379 1518 aa27.55■■■□□ 2
SDHA-201ENST00000264932 MIA2Q96PC5 1412 aa27.55■■■□□ 2
SDHA-201ENST00000264932 MPHOSPH9Q99550 1183 aa27.54■■■□□ 2
SDHA-201ENST00000264932 FKBP8Q14318 412 aa27.52■■■□□ 2
SDHA-201ENST00000264932 BCANQ96GW7 911 aa27.52■■■□□ 2
SDHA-201ENST00000264932 FOXD1Q16676 465 aa27.52■■■□□ 2
SDHA-201ENST00000264932 AKNAQ7Z591 1439 aa27.5■■□□□ 1.99
SDHA-201ENST00000264932 GCC2Q8IWJ2 1684 aa27.5■■□□□ 1.99
SDHA-201ENST00000264932 HSPA5P11021 654 aaKnown RBP27.49■■□□□ 1.99
SDHA-201ENST00000264932 TSHZ2Q9NRE2 1034 aa27.48■■□□□ 1.99
SDHA-201ENST00000264932 ZNF644Q9H582 1327 aaPredicted RBP27.46■■□□□ 1.99
SDHA-201ENST00000264932 WASHC2AQ641Q2 1341 aa27.45■■□□□ 1.99
SDHA-201ENST00000264932 IFT140Q96RY7 1462 aa27.45■■□□□ 1.98
SDHA-201ENST00000264932 L3MBTL2Q969R5 705 aa27.44■■□□□ 1.98
SDHA-201ENST00000264932 DISP1Q96F81 1524 aa27.44■■□□□ 1.98
SDHA-201ENST00000264932 KIAA0586Q9BVV6 1533 aa27.42■■□□□ 1.98
SDHA-201ENST00000264932 DAPK1P53355 1430 aa27.39■■□□□ 1.98
SDHA-201ENST00000264932 EIF4G2P78344 907 aaKnown RBP eCLIP27.38■■□□□ 1.97
SDHA-201ENST00000264932 ABCC5O15440 1437 aa27.38■■□□□ 1.97
SDHA-201ENST00000264932 NUP153P49790 1475 aaKnown RBP27.38■■□□□ 1.97
SDHA-201ENST00000264932 KIAA0556O60303 1618 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms