RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TRIM44Q96DX7 344 aaPredicted RBP23.82■■□□□ 1.4
COL5A3-201ENST00000264828 DDRGK1Q96HY6 314 aa23.79■■□□□ 1.4
COL5A3-201ENST00000264828 NACADO15069 1562 aa23.78■■□□□ 1.4
COL5A3-201ENST00000264828 BECN1Q14457 450 aa23.78■■□□□ 1.4
COL5A3-201ENST00000264828 PLEKHG5O94827 1062 aa23.77■■□□□ 1.4
COL5A3-201ENST00000264828 CDK11BP21127 795 aaKnown RBP23.76■■□□□ 1.39
COL5A3-201ENST00000264828 NCLP19338 710 aaKnown RBP23.76■■□□□ 1.39
COL5A3-201ENST00000264828 TPRNQ4KMQ1 711 aa23.76■■□□□ 1.39
COL5A3-201ENST00000264828 ZBTB7CA1YPR0 619 aa23.76■■□□□ 1.39
COL5A3-201ENST00000264828 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
COL5A3-201ENST00000264828 A0A0G2JS52 829 aa23.75■■□□□ 1.39
COL5A3-201ENST00000264828 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
COL5A3-201ENST00000264828 CLIP1P30622 1438 aa23.7■■□□□ 1.38
COL5A3-201ENST00000264828 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.38
COL5A3-201ENST00000264828 RTN4Q9NQC3 1192 aaKnown RBP23.67■■□□□ 1.38
COL5A3-201ENST00000264828 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
COL5A3-201ENST00000264828 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 GOLGA6L22H0YM25 854 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 PTMAP06454 111 aaKnown RBP23.65■■□□□ 1.38
COL5A3-201ENST00000264828 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
COL5A3-201ENST00000264828 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
COL5A3-201ENST00000264828 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
COL5A3-201ENST00000264828 SUPT16HQ9Y5B9 1047 aaKnown RBP23.61■■□□□ 1.37
COL5A3-201ENST00000264828 C14orf37Q86TY3 774 aa23.6■■□□□ 1.37
COL5A3-201ENST00000264828 DNTTIP2Q5QJE6 756 aaKnown RBP23.59■■□□□ 1.37
COL5A3-201ENST00000264828 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
COL5A3-201ENST00000264828 NAP1L5Q96NT1 182 aaPredicted RBP23.55■■□□□ 1.36
COL5A3-201ENST00000264828 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
COL5A3-201ENST00000264828 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
COL5A3-201ENST00000264828 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
COL5A3-201ENST00000264828 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
COL5A3-201ENST00000264828 ZRSR1Q15695 479 aaKnown RBP23.5■■□□□ 1.35
COL5A3-201ENST00000264828 RGL3Q3MIN7 710 aa23.5■■□□□ 1.35
COL5A3-201ENST00000264828 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
COL5A3-201ENST00000264828 EEA1Q15075 1411 aa23.49■■□□□ 1.35
COL5A3-201ENST00000264828 TULP1O00294 542 aaPredicted RBP23.48■■□□□ 1.35
COL5A3-201ENST00000264828 FTSJ3Q8IY81 847 aaKnown RBP23.48■■□□□ 1.35
COL5A3-201ENST00000264828 CASC1Q6TDU7 716 aa23.46■■□□□ 1.35
COL5A3-201ENST00000264828 TAOK2Q9UL54 1235 aa23.46■■□□□ 1.35
COL5A3-201ENST00000264828 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
COL5A3-201ENST00000264828 RGS3P49796 1198 aa23.46■■□□□ 1.35
COL5A3-201ENST00000264828 NEUROD2Q15784 382 aa23.45■■□□□ 1.35
COL5A3-201ENST00000264828 PLCB2Q00722 1185 aa23.44■■□□□ 1.34
COL5A3-201ENST00000264828 PLEKHD1A6NEE1 506 aa23.43■■□□□ 1.34
COL5A3-201ENST00000264828 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
COL5A3-201ENST00000264828 PPP1R15AO75807 674 aaPredicted RBP23.42■■□□□ 1.34
COL5A3-201ENST00000264828 ERICH6BQ5W0A0 696 aa23.41■■□□□ 1.34
COL5A3-201ENST00000264828 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
COL5A3-201ENST00000264828 CFAP53Q96M91 514 aa23.4■■□□□ 1.34
COL5A3-201ENST00000264828 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
COL5A3-201ENST00000264828 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
COL5A3-201ENST00000264828 FRAT1Q92837 279 aaPredicted RBP23.36■■□□□ 1.33
COL5A3-201ENST00000264828 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
COL5A3-201ENST00000264828 PPP4R2Q9NY27 417 aa23.34■■□□□ 1.33
COL5A3-201ENST00000264828 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
COL5A3-201ENST00000264828 CARD11Q9BXL7 1154 aa23.32■■□□□ 1.32
COL5A3-201ENST00000264828 B4GALNT3Q6L9W6 998 aa23.31■■□□□ 1.32
COL5A3-201ENST00000264828 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
COL5A3-201ENST00000264828 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
COL5A3-201ENST00000264828 CC2D1BQ5T0F9 858 aaKnown RBP23.27■■□□□ 1.32
COL5A3-201ENST00000264828 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.32
COL5A3-201ENST00000264828 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
COL5A3-201ENST00000264828 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
COL5A3-201ENST00000264828 SPRYD3Q8NCJ5 442 aa23.23■■□□□ 1.31
COL5A3-201ENST00000264828 SIN3AQ96ST3 1273 aa23.23■■□□□ 1.31
COL5A3-201ENST00000264828 HAP1P54257 671 aaPredicted RBP23.22■■□□□ 1.31
COL5A3-201ENST00000264828 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
COL5A3-201ENST00000264828 CECR2Q9BXF3 1484 aa23.21■■□□□ 1.31
COL5A3-201ENST00000264828 NAP1L2Q9ULW6 460 aaPredicted RBP23.21■■□□□ 1.31
COL5A3-201ENST00000264828 OS9Q13438 667 aaPredicted RBP23.19■■□□□ 1.3
COL5A3-201ENST00000264828 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
COL5A3-201ENST00000264828 GOLGA6L6A8MZA4 724 aa23.17■■□□□ 1.3
COL5A3-201ENST00000264828 FGD1P98174 961 aa23.17■■□□□ 1.3
COL5A3-201ENST00000264828 DEKP35659 375 aaKnown RBP23.16■■□□□ 1.3
COL5A3-201ENST00000264828 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
COL5A3-201ENST00000264828 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
COL5A3-201ENST00000264828 KCNJ4P48050 445 aa23.13■■□□□ 1.29
COL5A3-201ENST00000264828 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
COL5A3-201ENST00000264828 CUX2O14529 1486 aa23.11■■□□□ 1.29
COL5A3-201ENST00000264828 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
COL5A3-201ENST00000264828 MSNP26038 577 aaKnown RBP23.08■■□□□ 1.29
COL5A3-201ENST00000264828 POGKQ9P215 609 aa23.07■■□□□ 1.28
COL5A3-201ENST00000264828 CCNB3Q8WWL7 1395 aa23.06■■□□□ 1.28
COL5A3-201ENST00000264828 GOLGA6L4A6NEF3 574 aa23.06■■□□□ 1.28
COL5A3-201ENST00000264828 CHAF1AQ13111 956 aaPredicted RBP23.05■■□□□ 1.28
COL5A3-201ENST00000264828 DRC7Q8IY82 874 aa23.04■■□□□ 1.28
COL5A3-201ENST00000264828 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
COL5A3-201ENST00000264828 NPHP1O15259 732 aa23.03■■□□□ 1.28
COL5A3-201ENST00000264828 L1TD1Q5T7N2 865 aaKnown RBP23.02■■□□□ 1.28
COL5A3-201ENST00000264828 RBM19Q9Y4C8 960 aaKnown RBP23.01■■□□□ 1.27
COL5A3-201ENST00000264828 NRDCO43847 1150 aa23.01■■□□□ 1.27
COL5A3-201ENST00000264828 SOGA1O94964 1423 aa23.01■■□□□ 1.27
COL5A3-201ENST00000264828 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
COL5A3-201ENST00000264828 ARID3AQ99856 593 aa23■■□□□ 1.27
COL5A3-201ENST00000264828 CHMP4BQ9H444 224 aaKnown RBP23■■□□□ 1.27
COL5A3-201ENST00000264828 ABCC8Q09428 1581 aa23■■□□□ 1.27
COL5A3-201ENST00000264828 MS4A1P11836 297 aa23■■□□□ 1.27
COL5A3-201ENST00000264828 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms