RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 IGF1RP08069 1367 aa21.1■□□□□ 0.97
TRAF4-202ENST00000262396 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
TRAF4-202ENST00000262396 TTBK1Q5TCY1 1321 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-202ENST00000262396 RUSC2Q8N2Y8 1516 aa21.05■□□□□ 0.96
TRAF4-202ENST00000262396 CUL7Q14999 1698 aa21.04■□□□□ 0.96
TRAF4-202ENST00000262396 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
TRAF4-202ENST00000262396 KIAA0586Q9BVV6 1533 aa21.03■□□□□ 0.96
TRAF4-202ENST00000262396 FAM69CQ0P6D2 419 aa20.97■□□□□ 0.95
TRAF4-202ENST00000262396 CARMIL2Q6F5E8 1435 aa20.94■□□□□ 0.94
TRAF4-202ENST00000262396 PTPRGP23470 1445 aa20.92■□□□□ 0.94
TRAF4-202ENST00000262396 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
TRAF4-202ENST00000262396 ABCC10Q5T3U5 1492 aa20.84■□□□□ 0.93
TRAF4-202ENST00000262396 ADCY10Q96PN6 1610 aa20.83■□□□□ 0.93
TRAF4-202ENST00000262396 IQGAP2Q13576 1575 aa20.82■□□□□ 0.92
TRAF4-202ENST00000262396 MAPKBP1O60336 1514 aa20.82■□□□□ 0.92
TRAF4-202ENST00000262396 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
TRAF4-202ENST00000262396 KIF13AQ9H1H9 1805 aa20.8■□□□□ 0.92
TRAF4-202ENST00000262396 DIP2BQ9P265 1576 aa20.74■□□□□ 0.91
TRAF4-202ENST00000262396 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
TRAF4-202ENST00000262396 UACAQ9BZF9 1416 aa20.71■□□□□ 0.91
TRAF4-202ENST00000262396 ABCC2Q92887 1545 aa20.71■□□□□ 0.91
TRAF4-202ENST00000262396 ASXL2Q76L83 1435 aa20.68■□□□□ 0.9
TRAF4-202ENST00000262396 PLB1Q6P1J6 1458 aa20.68■□□□□ 0.9
TRAF4-202ENST00000262396 DISP1Q96F81 1524 aa20.67■□□□□ 0.9
TRAF4-202ENST00000262396 TSPOAP1O95153 1857 aa20.66■□□□□ 0.9
TRAF4-202ENST00000262396 KDM6BO15054 1643 aa20.64■□□□□ 0.9
TRAF4-202ENST00000262396 UGGT2Q9NYU1 1516 aa20.64■□□□□ 0.9
TRAF4-202ENST00000262396 UHRF1BP1LA0JNW5 1464 aa20.64■□□□□ 0.89
TRAF4-202ENST00000262396 GOLGA3Q08378 1498 aa20.61■□□□□ 0.89
TRAF4-202ENST00000262396 KIAA0556O60303 1618 aa20.6■□□□□ 0.89
TRAF4-202ENST00000262396 CTTNBP2Q8WZ74 1663 aa20.55■□□□□ 0.88
TRAF4-202ENST00000262396 KDM5BQ9UGL1 1544 aa20.54■□□□□ 0.88
TRAF4-202ENST00000262396 P3H3Q8IVL6 736 aa20.53■□□□□ 0.88
TRAF4-202ENST00000262396 CSRNP3Q8WYN3 585 aa20.53■□□□□ 0.88
TRAF4-202ENST00000262396 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
TRAF4-202ENST00000262396 PRXQ9BXM0 1461 aa20.52■□□□□ 0.88
TRAF4-202ENST00000262396 GLI2P10070 1586 aa20.51■□□□□ 0.87
TRAF4-202ENST00000262396 ZCCHC11Q5TAX3 1644 aaKnown RBP20.5■□□□□ 0.87
TRAF4-202ENST00000262396 EPRSP07814 1512 aaKnown RBP20.5■□□□□ 0.87
TRAF4-202ENST00000262396 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
TRAF4-202ENST00000262396 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
TRAF4-202ENST00000262396 ARID3CA6NKF2 412 aa20.48■□□□□ 0.87
TRAF4-202ENST00000262396 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
TRAF4-202ENST00000262396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
TRAF4-202ENST00000262396 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
TRAF4-202ENST00000262396 KDM4FA0A1W2PPD8 638 aa20.4■□□□□ 0.86
TRAF4-202ENST00000262396 EEA1Q15075 1411 aa20.39■□□□□ 0.85
TRAF4-202ENST00000262396 CD109Q6YHK3 1445 aa20.39■□□□□ 0.85
TRAF4-202ENST00000262396 MAP3K4Q9Y6R4 1608 aa20.38■□□□□ 0.85
TRAF4-202ENST00000262396 ABCA8O94911 1581 aa20.38■□□□□ 0.85
TRAF4-202ENST00000262396 PPRC1Q5VV67 1664 aaKnown RBP20.37■□□□□ 0.85
TRAF4-202ENST00000262396 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
TRAF4-202ENST00000262396 COL17A1Q9UMD9 1497 aaPredicted RBP20.3■□□□□ 0.84
TRAF4-202ENST00000262396 MAGI3Q5TCQ9 1506 aa20.28■□□□□ 0.84
TRAF4-202ENST00000262396 CFAP43Q8NDM7 1665 aa20.28■□□□□ 0.84
TRAF4-202ENST00000262396 ATP10BO94823 1461 aa20.27■□□□□ 0.84
TRAF4-202ENST00000262396 ADGRL1O94910 1474 aa20.27■□□□□ 0.84
TRAF4-202ENST00000262396 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
TRAF4-202ENST00000262396 PLEKHD1A6NEE1 506 aa20.23■□□□□ 0.83
TRAF4-202ENST00000262396 FHOD3Q2V2M9 1422 aa20.23■□□□□ 0.83
TRAF4-202ENST00000262396 SAMD9Q5K651 1589 aa20.23■□□□□ 0.83
TRAF4-202ENST00000262396 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
TRAF4-202ENST00000262396 RAPGEF6Q8TEU7 1601 aa20.22■□□□□ 0.83
TRAF4-202ENST00000262396 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
TRAF4-202ENST00000262396 KIF21BO75037 1637 aa20.13■□□□□ 0.81
TRAF4-202ENST00000262396 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
TRAF4-202ENST00000262396 NUP153P49790 1475 aaKnown RBP20.12■□□□□ 0.81
TRAF4-202ENST00000262396 ARID4BQ4LE39 1312 aaPredicted RBP20.12■□□□□ 0.81
TRAF4-202ENST00000262396 RAPGEF3O95398 923 aa20.12■□□□□ 0.81
TRAF4-202ENST00000262396 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
TRAF4-202ENST00000262396 ARAP3Q8WWN8 1544 aa20.11■□□□□ 0.81
TRAF4-202ENST00000262396 ABCA9Q8IUA7 1624 aa20.1■□□□□ 0.81
TRAF4-202ENST00000262396 NEO1Q92859 1461 aa20.08■□□□□ 0.81
TRAF4-202ENST00000262396 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
TRAF4-202ENST00000262396 FMN1Q68DA7 1419 aa20.02■□□□□ 0.8
TRAF4-202ENST00000262396 DENND4BO75064 1496 aaPredicted RBP19.99■□□□□ 0.79
TRAF4-202ENST00000262396 AKNAQ7Z591 1439 aa19.99■□□□□ 0.79
TRAF4-202ENST00000262396 FANCAO15360 1455 aa19.99■□□□□ 0.79
TRAF4-202ENST00000262396 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
TRAF4-202ENST00000262396 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
TRAF4-202ENST00000262396 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
TRAF4-202ENST00000262396 HECW2Q9P2P5 1572 aa19.95■□□□□ 0.78
TRAF4-202ENST00000262396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.782e-6■■■□□ 16.3
TRAF4-202ENST00000262396 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
TRAF4-202ENST00000262396 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
TRAF4-202ENST00000262396 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
TRAF4-202ENST00000262396 EFCAB2Q5VUJ9 269 aa19.92■□□□□ 0.78
TRAF4-202ENST00000262396 CLIP1P30622 1438 aa19.91■□□□□ 0.78
TRAF4-202ENST00000262396 TTC37Q6PGP7 1564 aa19.9■□□□□ 0.78
TRAF4-202ENST00000262396 POGZQ7Z3K3 1410 aa19.89■□□□□ 0.77
TRAF4-202ENST00000262396 MLECQ14165 292 aa19.88■□□□□ 0.77
TRAF4-202ENST00000262396 PLCH2O75038 1416 aa19.87■□□□□ 0.77
TRAF4-202ENST00000262396 SCAPERQ9BY12 1400 aa19.87■□□□□ 0.77
TRAF4-202ENST00000262396 FRMPD1Q5SYB0 1578 aa19.87■□□□□ 0.77
TRAF4-202ENST00000262396 PTPRMP28827 1452 aa19.86■□□□□ 0.77
TRAF4-202ENST00000262396 ILDR1Q86SU0 546 aaPredicted RBP19.84■□□□□ 0.77
TRAF4-202ENST00000262396 ARHGEF40Q8TER5 1519 aa19.84■□□□□ 0.77
TRAF4-202ENST00000262396 ZFYVE16Q7Z3T8 1539 aa19.83■□□□□ 0.77
TRAF4-202ENST00000262396 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
TRAF4-202ENST00000262396 KIF14Q15058 1648 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms