RNA–Protein interactions for RNA: ENST00000262056.13

EIF4B-201, Transcript of eukaryotic translation initiation factor 4B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EIF4B, Length 4,148 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-201ENST00000262056 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
EIF4B-201ENST00000262056 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
EIF4B-201ENST00000262056 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
EIF4B-201ENST00000262056 IGF1RP08069 1367 aa11.56□□□□□ -0.56
EIF4B-201ENST00000262056 CLIP1P30622 1438 aa11.55□□□□□ -0.56
EIF4B-201ENST00000262056 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
EIF4B-201ENST00000262056 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
EIF4B-201ENST00000262056 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
EIF4B-201ENST00000262056 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
EIF4B-201ENST00000262056 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
EIF4B-201ENST00000262056 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
EIF4B-201ENST00000262056 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
EIF4B-201ENST00000262056 CARMIL2Q6F5E8 1435 aa11.49□□□□□ -0.57
EIF4B-201ENST00000262056 KIF21AQ7Z4S6 1674 aa11.49□□□□□ -0.57
EIF4B-201ENST00000262056 CEP162Q5TB80 1403 aa11.47□□□□□ -0.57
EIF4B-201ENST00000262056 MTUS2Q5JR59 1369 aa11.46□□□□□ -0.57
EIF4B-201ENST00000262056 FHAD1B1AJZ9 1412 aa11.45□□□□□ -0.58
EIF4B-201ENST00000262056 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
EIF4B-201ENST00000262056 TNIKQ9UKE5 1360 aa11.44□□□□□ -0.58
EIF4B-201ENST00000262056 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
EIF4B-201ENST00000262056 PTPRGP23470 1445 aa11.41□□□□□ -0.58
EIF4B-201ENST00000262056 ABCA10Q8WWZ4 1543 aa11.41□□□□□ -0.58
EIF4B-201ENST00000262056 FHOD3Q2V2M9 1422 aa11.41□□□□□ -0.58
EIF4B-201ENST00000262056 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
EIF4B-201ENST00000262056 MIER1Q8N108 512 aa11.4□□□□□ -0.58
EIF4B-201ENST00000262056 TRIM52Q96A61 297 aa11.39□□□□□ -0.59
EIF4B-201ENST00000262056 CHIC2Q9UKJ5 165 aa11.39□□□□□ -0.59
EIF4B-201ENST00000262056 PRG4Q92954 1404 aaPredicted RBP11.37□□□□□ -0.59
EIF4B-201ENST00000262056 WDR62O43379 1518 aa11.35□□□□□ -0.59
EIF4B-201ENST00000262056 ESF1Q9H501 851 aaKnown RBP11.35□□□□□ -0.59
EIF4B-201ENST00000262056 CFDP1Q9UEE9 299 aaPredicted RBP11.34□□□□□ -0.59
EIF4B-201ENST00000262056 SYNJ2O15056 1496 aa11.33□□□□□ -0.6
EIF4B-201ENST00000262056 MYT1Q01538 1121 aa11.33□□□□□ -0.6
EIF4B-201ENST00000262056 ARID4BQ4LE39 1312 aaPredicted RBP11.32□□□□□ -0.6
EIF4B-201ENST00000262056 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
EIF4B-201ENST00000262056 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
EIF4B-201ENST00000262056 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
EIF4B-201ENST00000262056 BCANQ96GW7 911 aa11.31□□□□□ -0.6
EIF4B-201ENST00000262056 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
EIF4B-201ENST00000262056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.61e-8■■■□□ 15.1
EIF4B-201ENST00000262056 GRIN2AQ12879 1464 aa11.3□□□□□ -0.6
EIF4B-201ENST00000262056 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
EIF4B-201ENST00000262056 FMN1Q68DA7 1419 aa11.28□□□□□ -0.6
EIF4B-201ENST00000262056 MLECQ14165 292 aa11.26□□□□□ -0.61
EIF4B-201ENST00000262056 KANK4Q5T7N3 995 aaPredicted RBP11.26□□□□□ -0.61
EIF4B-201ENST00000262056 PRXQ9BXM0 1461 aa11.26□□□□□ -0.61
EIF4B-201ENST00000262056 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
EIF4B-201ENST00000262056 EIF4G3O43432 1585 aaKnown RBP11.25□□□□□ -0.61
EIF4B-201ENST00000262056 RRP7BPQ9NSQ0 103 aa11.24□□□□□ -0.61
EIF4B-201ENST00000262056 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
EIF4B-201ENST00000262056 CCNB3Q8WWL7 1395 aa11.24□□□□□ -0.61
EIF4B-201ENST00000262056 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
EIF4B-201ENST00000262056 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
EIF4B-201ENST00000262056 VPS8Q8N3P4 1428 aa11.21□□□□□ -0.62
EIF4B-201ENST00000262056 EFCAB2Q5VUJ9 269 aa11.2□□□□□ -0.62
EIF4B-201ENST00000262056 CHGAP10645 457 aaKnown RBP11.2□□□□□ -0.62
EIF4B-201ENST00000262056 SENP3Q9H4L4 574 aaPredicted RBP11.19□□□□□ -0.62
EIF4B-201ENST00000262056 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
EIF4B-201ENST00000262056 STAG3Q9UJ98 1225 aa11.17□□□□□ -0.62
EIF4B-201ENST00000262056 HNRNPMP52272 730 aaKnown RBP eCLIP11.16□□□□□ -0.621e-6■■■■□ 26.6
EIF4B-201ENST00000262056 ZNF326Q5BKZ1 582 aaKnown RBP11.16□□□□□ -0.62
EIF4B-201ENST00000262056 IQGAP2Q13576 1575 aa11.15□□□□□ -0.62
EIF4B-201ENST00000262056 TARBP1Q13395 1621 aaKnown RBP11.14□□□□□ -0.63
EIF4B-201ENST00000262056 GGT6Q6P531 493 aa11.14□□□□□ -0.63
EIF4B-201ENST00000262056 CUL7Q14999 1698 aa11.13□□□□□ -0.63
EIF4B-201ENST00000262056 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
EIF4B-201ENST00000262056 PLB1Q6P1J6 1458 aa11.13□□□□□ -0.63
EIF4B-201ENST00000262056 ARHGAP35Q9NRY4 1499 aa11.13□□□□□ -0.63
EIF4B-201ENST00000262056 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
EIF4B-201ENST00000262056 KIF21BO75037 1637 aa11.11□□□□□ -0.63
EIF4B-201ENST00000262056 ARAP1Q96P48 1450 aa11.11□□□□□ -0.63
EIF4B-201ENST00000262056 ADAMTS12P58397 1594 aa11.1□□□□□ -0.63
EIF4B-201ENST00000262056 NEFLP07196 543 aa11.09□□□□□ -0.63
EIF4B-201ENST00000262056 HIRIP3Q9BW71 556 aaPredicted RBP11.08□□□□□ -0.64
EIF4B-201ENST00000262056 CCDC18Q5T9S5 1454 aa11.08□□□□□ -0.64
EIF4B-201ENST00000262056 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
EIF4B-201ENST00000262056 ABCA5Q8WWZ7 1642 aa11.07□□□□□ -0.64
EIF4B-201ENST00000262056 SUPT16HQ9Y5B9 1047 aaKnown RBP11.07□□□□□ -0.64
EIF4B-201ENST00000262056 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
EIF4B-201ENST00000262056 NUP160Q12769 1436 aa11.06□□□□□ -0.64
EIF4B-201ENST00000262056 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
EIF4B-201ENST00000262056 RAPGEF3O95398 923 aa11.05□□□□□ -0.64
EIF4B-201ENST00000262056 FKBP8Q14318 412 aa11.05□□□□□ -0.64
EIF4B-201ENST00000262056 AFAP1Q8N556 730 aa11.05□□□□□ -0.64
EIF4B-201ENST00000262056 PBRM1Q86U86 1689 aa11.05□□□□□ -0.64
EIF4B-201ENST00000262056 KIF3BO15066 747 aa11.04□□□□□ -0.64
EIF4B-201ENST00000262056 DDX10Q13206 875 aaKnown RBP11.03□□□□□ -0.64
EIF4B-201ENST00000262056 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
EIF4B-201ENST00000262056 CASKIN1Q8WXD9 1431 aa11.02□□□□□ -0.65
EIF4B-201ENST00000262056 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
EIF4B-201ENST00000262056 EFCAB5A4FU69 1503 aa11□□□□□ -0.65
EIF4B-201ENST00000262056 RGL3Q3MIN7 710 aa11□□□□□ -0.65
EIF4B-201ENST00000262056 CEP170Q5SW79 1584 aa11□□□□□ -0.65
EIF4B-201ENST00000262056 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
EIF4B-201ENST00000262056 CHD1O14646 1710 aa10.98□□□□□ -0.65
EIF4B-201ENST00000262056 CD109Q6YHK3 1445 aa10.97□□□□□ -0.65
EIF4B-201ENST00000262056 ARHGEF11O15085 1522 aa10.96□□□□□ -0.65
EIF4B-201ENST00000262056 PPP1R15AO75807 674 aaPredicted RBP10.96□□□□□ -0.65
EIF4B-201ENST00000262056 AEBP2Q6ZN18 517 aaPredicted RBP10.96□□□□□ -0.66
EIF4B-201ENST00000262056 EPRSP07814 1512 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms