RNA–Protein interactions for RNA: ENST00000261173.6

ATP2B1-201, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B1, Length 6,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-201ENST00000261173 LAS1LQ9Y4W2 734 aaKnown RBP4.18□□□□□ -1.74
ATP2B1-201ENST00000261173 BRPF3Q9ULD4 1205 aa4.18□□□□□ -1.74
ATP2B1-201ENST00000261173 TRIM52Q96A61 297 aa4.17□□□□□ -1.74
ATP2B1-201ENST00000261173 DDRGK1Q96HY6 314 aa4.17□□□□□ -1.74
ATP2B1-201ENST00000261173 BCL11BQ9C0K0 894 aaPredicted RBP4.17□□□□□ -1.74
ATP2B1-201ENST00000261173 TNNT2P45379 298 aaPredicted RBP4.17□□□□□ -1.74
ATP2B1-201ENST00000261173 IRX6P78412 446 aaPredicted RBP4.17□□□□□ -1.74
ATP2B1-201ENST00000261173 AAMPQ13685 434 aa4.17□□□□□ -1.74
ATP2B1-201ENST00000261173 CNGB1Q14028 1251 aaPredicted RBP4.17□□□□□ -1.74
ATP2B1-201ENST00000261173 ARXQ96QS3 562 aa4.16□□□□□ -1.74
ATP2B1-201ENST00000261173 PAK3O75914 559 aaPredicted RBP4.16□□□□□ -1.74
ATP2B1-201ENST00000261173 PNNQ9H307 717 aaKnown RBP4.16□□□□□ -1.74
ATP2B1-201ENST00000261173 NCBP3Q53F19 620 aaKnown RBP4.16□□□□□ -1.74
ATP2B1-201ENST00000261173 CANXP27824 592 aaKnown RBP4.15□□□□□ -1.75
ATP2B1-201ENST00000261173 L1TD1Q5T7N2 865 aaKnown RBP4.15□□□□□ -1.75
ATP2B1-201ENST00000261173 ZCCHC6Q5VYS8 1495 aaKnown RBP4.14□□□□□ -1.75
ATP2B1-201ENST00000261173 WASHC2AQ641Q2 1341 aa4.14□□□□□ -1.75
ATP2B1-201ENST00000261173 CCER2I3L3R5 266 aa4.13□□□□□ -1.75
ATP2B1-201ENST00000261173 WASHC2CQ9Y4E1 1318 aa4.13□□□□□ -1.75
ATP2B1-201ENST00000261173 HNRNPUQ00839 825 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATP2B1-201ENST00000261173 CDK11BP21127 795 aaKnown RBP4.13□□□□□ -1.75
ATP2B1-201ENST00000261173 DCAF8L2P0C7V8 631 aa4.13□□□□□ -1.75
ATP2B1-201ENST00000261173 EEA1Q15075 1411 aa4.13□□□□□ -1.75
ATP2B1-201ENST00000261173 KLHL34Q8N239 644 aa4.13□□□□□ -1.75
ATP2B1-201ENST00000261173 B4GALNT3Q6L9W6 998 aa4.12□□□□□ -1.75
ATP2B1-201ENST00000261173 DDX10Q13206 875 aaKnown RBP4.12□□□□□ -1.75
ATP2B1-201ENST00000261173 BBXQ8WY36 941 aaPredicted RBP4.11□□□□□ -1.75
ATP2B1-201ENST00000261173 CALD1Q05682 793 aaKnown RBP4.11□□□□□ -1.75
ATP2B1-201ENST00000261173 FRAT1Q92837 279 aaPredicted RBP4.11□□□□□ -1.75
ATP2B1-201ENST00000261173 TRIM44Q96DX7 344 aaPredicted RBP4.11□□□□□ -1.75
ATP2B1-201ENST00000261173 KCNH8Q96L42 1107 aa4.11□□□□□ -1.75
ATP2B1-201ENST00000261173 NAP1L2Q9ULW6 460 aaPredicted RBP4.11□□□□□ -1.75
ATP2B1-201ENST00000261173 PAXIP1Q6ZW49 1069 aaPredicted RBP4.11□□□□□ -1.75
ATP2B1-201ENST00000261173 TPM2P07951 284 aa4.1□□□□□ -1.75
ATP2B1-201ENST00000261173 PDCL3Q9H2J4 239 aa4.1□□□□□ -1.75
ATP2B1-201ENST00000261173 ANP32BQ92688 251 aaKnown RBP4.08□□□□□ -1.76
ATP2B1-201ENST00000261173 MAP7D2Q96T17 732 aa4.08□□□□□ -1.76
ATP2B1-201ENST00000261173 ARID4BQ4LE39 1312 aaPredicted RBP4.08□□□□□ -1.76
ATP2B1-201ENST00000261173 BRD2P25440 801 aaKnown RBP4.08□□□□□ -1.76
ATP2B1-201ENST00000261173 IPO4Q8TEX9 1081 aaKnown RBP4.08□□□□□ -1.76
ATP2B1-201ENST00000261173 UBTFP17480 764 aaKnown RBP4.07□□□□□ -1.76
ATP2B1-201ENST00000261173 RGS3P49796 1198 aa4.07□□□□□ -1.76
ATP2B1-201ENST00000261173 NFKBIBQ15653 356 aa4.07□□□□□ -1.76
ATP2B1-201ENST00000261173 HOMEZQ8IX15 550 aa4.07□□□□□ -1.76
ATP2B1-201ENST00000261173 TCERG1O14776 1098 aaKnown RBP4.06□□□□□ -1.76
ATP2B1-201ENST00000261173 WRNQ14191 1432 aaPredicted RBP eCLIP4.06□□□□□ -1.76
ATP2B1-201ENST00000261173 CHMP4BQ9H444 224 aaKnown RBP4.06□□□□□ -1.76
ATP2B1-201ENST00000261173 MTERF4Q7Z6M4 381 aaKnown RBP4.06□□□□□ -1.76
ATP2B1-201ENST00000261173 CENPJQ9HC77 1338 aaPredicted RBP4.05□□□□□ -1.76
ATP2B1-201ENST00000261173 GOLGA6L3A6NEY3 463 aa4.05□□□□□ -1.76
ATP2B1-201ENST00000261173 HAP1P54257 671 aaPredicted RBP4.05□□□□□ -1.76
ATP2B1-201ENST00000261173 DNTTIP2Q5QJE6 756 aaKnown RBP4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 AMER1Q5JTC6 1135 aaPredicted RBP4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 TAF3Q5VWG9 929 aa4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 CLCN1P35523 988 aa4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 RSPH4AQ5TD94 716 aa4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 PTMSP20962 102 aa4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 FTSJ3Q8IY81 847 aaKnown RBP4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 SMAP1Q8IYB5 467 aaPredicted RBP4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 CEP162Q5TB80 1403 aa4.04□□□□□ -1.76
ATP2B1-201ENST00000261173 BECN1Q14457 450 aa4.03□□□□□ -1.76
ATP2B1-201ENST00000261173 PDE4AP27815 886 aa4.03□□□□□ -1.76
ATP2B1-201ENST00000261173 MSNP26038 577 aaKnown RBP4.03□□□□□ -1.77
ATP2B1-201ENST00000261173 RRAGDQ9NQL2 400 aaPredicted RBP4.02□□□□□ -1.77
ATP2B1-201ENST00000261173 APPP05067 770 aa4.02□□□□□ -1.77
ATP2B1-201ENST00000261173 MS4A1P11836 297 aa4.02□□□□□ -1.77
ATP2B1-201ENST00000261173 FAM9BQ8IZU0 186 aa4.02□□□□□ -1.77
ATP2B1-201ENST00000261173 POLR3GLQ9BT43 218 aa4.02□□□□□ -1.77
ATP2B1-201ENST00000261173 CHMP4AQ9BY43 222 aa4.02□□□□□ -1.77
ATP2B1-201ENST00000261173 FAM13BQ9NYF5 915 aa4.02□□□□□ -1.77
ATP2B1-201ENST00000261173 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.01□□□□□ -1.77
ATP2B1-201ENST00000261173 ZHX1Q9UKY1 873 aaPredicted RBP4.01□□□□□ -1.77
ATP2B1-201ENST00000261173 DHX37Q8IY37 1157 aaKnown RBP4.01□□□□□ -1.77
ATP2B1-201ENST00000261173 IRX3P78415 501 aaPredicted RBP4.01□□□□□ -1.77
ATP2B1-201ENST00000261173 ARID3AQ99856 593 aa4□□□□□ -1.77
ATP2B1-201ENST00000261173 MYH16Q9H6N6 1097 aa4□□□□□ -1.77
ATP2B1-201ENST00000261173 DHX57Q6P158 1386 aaKnown RBP4□□□□□ -1.77
ATP2B1-201ENST00000261173 PLCD3Q8N3E9 789 aa4□□□□□ -1.77
ATP2B1-201ENST00000261173 PEG3Q9GZU2 1588 aa4□□□□□ -1.77
ATP2B1-201ENST00000261173 PRDM4Q9UKN5 801 aa4□□□□□ -1.77
ATP2B1-201ENST00000261173 TULP1O00294 542 aaPredicted RBP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 FRAT2O75474 233 aaPredicted RBP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 TEX2Q8IWB9 1127 aa3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 BCCIPQ9P287 314 aaKnown RBP eCLIP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 HSP90B1P14625 803 aaKnown RBP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 GTF2E1P29083 439 aaPredicted RBP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 KIAA1211Q6ZU35 1233 aa3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 STAC3Q96MF2 364 aa3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 C14orf37Q86TY3 774 aa3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 DCAF11Q8TEB1 546 aa3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 UTP14CQ5TAP6 766 aaKnown RBP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 PPP1R15AO75807 674 aaPredicted RBP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 LETM1O95202 739 aaPredicted RBP3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 MRE11P49959 708 aa3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 TNIKQ9UKE5 1360 aa3.99□□□□□ -1.77
ATP2B1-201ENST00000261173 ESPNB1AK53 854 aa3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 MRS2Q9HD23 443 aa3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 ZBED9Q6R2W3 1325 aa3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 PPP4R3BQ5MIZ7 849 aa3.98□□□□□ -1.77
ATP2B1-201ENST00000261173 GTPBP4Q9BZE4 634 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms