RNA–Protein interactions for RNA: ENST00000256682.8

ARF3-201, Transcript of ADP ribosylation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF3, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-201ENST00000256682 HNRNPUQ00839 825 aaKnown RBP eCLIP17.85■□□□□ 0.45
ARF3-201ENST00000256682 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
ARF3-201ENST00000256682 CUX2O14529 1486 aa17.82■□□□□ 0.44
ARF3-201ENST00000256682 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
ARF3-201ENST00000256682 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
ARF3-201ENST00000256682 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
ARF3-201ENST00000256682 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
ARF3-201ENST00000256682 CUX1P39880 1505 aa17.77■□□□□ 0.44
ARF3-201ENST00000256682 SYNJ1O43426 1573 aa17.77■□□□□ 0.43
ARF3-201ENST00000256682 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.43
ARF3-201ENST00000256682 CEP162Q5TB80 1403 aa17.77■□□□□ 0.43
ARF3-201ENST00000256682 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
ARF3-201ENST00000256682 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
ARF3-201ENST00000256682 CLIP1P30622 1438 aa17.76■□□□□ 0.43
ARF3-201ENST00000256682 KIF27Q86VH2 1401 aa17.76■□□□□ 0.43
ARF3-201ENST00000256682 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
ARF3-201ENST00000256682 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
ARF3-201ENST00000256682 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
ARF3-201ENST00000256682 URB2Q14146 1524 aaKnown RBP17.73■□□□□ 0.43
ARF3-201ENST00000256682 RRP7BPQ9NSQ0 103 aa17.7■□□□□ 0.42
ARF3-201ENST00000256682 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
ARF3-201ENST00000256682 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
ARF3-201ENST00000256682 AQRO60306 1485 aaKnown RBP eCLIP17.68■□□□□ 0.42
ARF3-201ENST00000256682 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
ARF3-201ENST00000256682 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
ARF3-201ENST00000256682 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
ARF3-201ENST00000256682 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
ARF3-201ENST00000256682 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
ARF3-201ENST00000256682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.62■□□□□ 0.413e-6■□□□□ 11.3
ARF3-201ENST00000256682 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
ARF3-201ENST00000256682 EEA1Q15075 1411 aa17.57■□□□□ 0.4
ARF3-201ENST00000256682 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
ARF3-201ENST00000256682 GAPVD1Q14C86 1478 aa17.56■□□□□ 0.4
ARF3-201ENST00000256682 IGF1RP08069 1367 aa17.54■□□□□ 0.4
ARF3-201ENST00000256682 CHGAP10645 457 aaKnown RBP17.54■□□□□ 0.4
ARF3-201ENST00000256682 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
ARF3-201ENST00000256682 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
ARF3-201ENST00000256682 IFT140Q96RY7 1462 aa17.52■□□□□ 0.39
ARF3-201ENST00000256682 NBR1Q14596 966 aa17.51■□□□□ 0.39
ARF3-201ENST00000256682 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
ARF3-201ENST00000256682 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
ARF3-201ENST00000256682 TMC1Q8TDI8 760 aa17.48■□□□□ 0.39
ARF3-201ENST00000256682 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
ARF3-201ENST00000256682 TNIKQ9UKE5 1360 aa17.47■□□□□ 0.39
ARF3-201ENST00000256682 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
ARF3-201ENST00000256682 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
ARF3-201ENST00000256682 RAPGEF2Q9Y4G8 1499 aa17.45■□□□□ 0.38
ARF3-201ENST00000256682 RGL3Q3MIN7 710 aa17.44■□□□□ 0.38
ARF3-201ENST00000256682 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
ARF3-201ENST00000256682 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
ARF3-201ENST00000256682 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
ARF3-201ENST00000256682 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
ARF3-201ENST00000256682 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
ARF3-201ENST00000256682 WDR62O43379 1518 aa17.42■□□□□ 0.38
ARF3-201ENST00000256682 ANP32AP39687 249 aaKnown RBP17.42■□□□□ 0.38
ARF3-201ENST00000256682 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
ARF3-201ENST00000256682 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.373e-18■■■■□ 25.8
ARF3-201ENST00000256682 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
ARF3-201ENST00000256682 KCNH8Q96L42 1107 aa17.36■□□□□ 0.37
ARF3-201ENST00000256682 ARXQ96QS3 562 aa17.34■□□□□ 0.37
ARF3-201ENST00000256682 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
ARF3-201ENST00000256682 FOXD1Q16676 465 aa17.33■□□□□ 0.36
ARF3-201ENST00000256682 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
ARF3-201ENST00000256682 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
ARF3-201ENST00000256682 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
ARF3-201ENST00000256682 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
ARF3-201ENST00000256682 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
ARF3-201ENST00000256682 PRXQ9BXM0 1461 aa17.25■□□□□ 0.35
ARF3-201ENST00000256682 B4GALNT3Q6L9W6 998 aa17.24■□□□□ 0.35
ARF3-201ENST00000256682 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
ARF3-201ENST00000256682 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
ARF3-201ENST00000256682 EIF4G3O43432 1585 aaKnown RBP17.2■□□□□ 0.34
ARF3-201ENST00000256682 ZBTB47Q9UFB7 747 aaPredicted RBP17.19■□□□□ 0.34
ARF3-201ENST00000256682 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
ARF3-201ENST00000256682 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
ARF3-201ENST00000256682 CFDP1Q9UEE9 299 aaPredicted RBP17.19■□□□□ 0.34
ARF3-201ENST00000256682 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
ARF3-201ENST00000256682 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
ARF3-201ENST00000256682 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
ARF3-201ENST00000256682 FHOD3Q2V2M9 1422 aa17.15■□□□□ 0.34
ARF3-201ENST00000256682 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
ARF3-201ENST00000256682 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
ARF3-201ENST00000256682 NEUROD2Q15784 382 aa17.15■□□□□ 0.34
ARF3-201ENST00000256682 CARD11Q9BXL7 1154 aa17.14■□□□□ 0.33
ARF3-201ENST00000256682 CYB5RLQ6IPT4 315 aa17.13■□□□□ 0.33
ARF3-201ENST00000256682 NEFMP07197 916 aa17.13■□□□□ 0.33
ARF3-201ENST00000256682 GRIN2AQ12879 1464 aa17.13■□□□□ 0.33
ARF3-201ENST00000256682 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
ARF3-201ENST00000256682 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
ARF3-201ENST00000256682 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
ARF3-201ENST00000256682 CARMIL2Q6F5E8 1435 aa17.1■□□□□ 0.33
ARF3-201ENST00000256682 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
ARF3-201ENST00000256682 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
ARF3-201ENST00000256682 KIF21BO75037 1637 aa17.09■□□□□ 0.33
ARF3-201ENST00000256682 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.33
ARF3-201ENST00000256682 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
ARF3-201ENST00000256682 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
ARF3-201ENST00000256682 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
ARF3-201ENST00000256682 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
ARF3-201ENST00000256682 CUL7Q14999 1698 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms