RNA–Protein interactions for RNA: ENST00000240159.8

RNF170-201, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 2,023 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-201ENST00000240159 ADAMTS12P58397 1594 aa35.4■■■■□ 3.26
RNF170-201ENST00000240159 CTTNBP2Q8WZ74 1663 aa35.4■■■■□ 3.26
RNF170-201ENST00000240159 SNAPC4Q5SXM2 1469 aa35.26■■■■□ 3.23
RNF170-201ENST00000240159 EFCAB5A4FU69 1503 aa35.2■■■■□ 3.23
RNF170-201ENST00000240159 APLP2Q06481 763 aa35.16■■■■□ 3.22
RNF170-201ENST00000240159 MAGI1Q96QZ7 1491 aaPredicted RBP35.16■■■■□ 3.22
RNF170-201ENST00000240159 TTBK1Q5TCY1 1321 aaPredicted RBP35.15■■■■□ 3.22
RNF170-201ENST00000240159 P3H3Q8IVL6 736 aa35.08■■■■□ 3.21
RNF170-201ENST00000240159 GRIN2AQ12879 1464 aa35.07■■■■□ 3.2
RNF170-201ENST00000240159 SAMD9Q5K651 1589 aa35.06■■■■□ 3.2
RNF170-201ENST00000240159 FHOD3Q2V2M9 1422 aa35.06■■■■□ 3.2
RNF170-201ENST00000240159 SYNJ2O15056 1496 aa35.04■■■■□ 3.2
RNF170-201ENST00000240159 IQGAP2Q13576 1575 aa35.03■■■■□ 3.2
RNF170-201ENST00000240159 CHMP7Q8WUX9 453 aaPredicted RBP34.96■■■■□ 3.19
RNF170-201ENST00000240159 KIAA0586Q9BVV6 1533 aa34.94■■■■□ 3.18
RNF170-201ENST00000240159 PCF11O94913 1555 aaKnown RBP34.92■■■■□ 3.18
RNF170-201ENST00000240159 FMN1Q68DA7 1419 aa34.89■■■■□ 3.18
RNF170-201ENST00000240159 KANK4Q5T7N3 995 aaPredicted RBP34.88■■■■□ 3.17
RNF170-201ENST00000240159 MAP3K1Q13233 1512 aa34.87■■■■□ 3.17
RNF170-201ENST00000240159 UGGT2Q9NYU1 1516 aa34.87■■■■□ 3.17
RNF170-201ENST00000240159 FBLN2P98095 1184 aa34.86■■■■□ 3.17
RNF170-201ENST00000240159 CEP170Q5SW79 1584 aa34.86■■■■□ 3.17
RNF170-201ENST00000240159 FYCO1Q9BQS8 1478 aa34.85■■■■□ 3.17
RNF170-201ENST00000240159 CASKIN1Q8WXD9 1431 aa34.84■■■■□ 3.17
RNF170-201ENST00000240159 TIAM1Q13009 1591 aa34.84■■■■□ 3.17
RNF170-201ENST00000240159 NUP160Q12769 1436 aa34.8■■■■□ 3.16
RNF170-201ENST00000240159 CFAP43Q8NDM7 1665 aa34.74■■■■□ 3.15
RNF170-201ENST00000240159 ATP1B4Q9UN42 357 aaPredicted RBP34.72■■■■□ 3.15
RNF170-201ENST00000240159 DISP1Q96F81 1524 aa34.7■■■■□ 3.15
RNF170-201ENST00000240159 HRCP23327 699 aa34.7■■■■□ 3.15
RNF170-201ENST00000240159 KIAA0556O60303 1618 aa34.68■■■■□ 3.14
RNF170-201ENST00000240159 LRRC9Q6ZRR7 1453 aa34.67■■■■□ 3.14
RNF170-201ENST00000240159 CHD1O14646 1710 aa34.62■■■■□ 3.13
RNF170-201ENST00000240159 LRRIQ1Q96JM4 1722 aa34.57■■■■□ 3.13
RNF170-201ENST00000240159 JPH4Q96JJ6 628 aa34.55■■■■□ 3.12
RNF170-201ENST00000240159 HECW1Q76N89 1606 aa34.51■■■■□ 3.11
RNF170-201ENST00000240159 RRBP1Q9P2E9 1410 aaKnown RBP34.5■■■■□ 3.11
RNF170-201ENST00000240159 CARMIL2Q6F5E8 1435 aa34.48■■■■□ 3.11
RNF170-201ENST00000240159 CCDC18Q5T9S5 1454 aa34.45■■■■□ 3.11
RNF170-201ENST00000240159 EPRSP07814 1512 aaKnown RBP34.4■■■■□ 3.1
RNF170-201ENST00000240159 HNRNPUL2Q1KMD3 747 aaKnown RBP34.39■■■■□ 3.1
RNF170-201ENST00000240159 PHLDB1Q86UU1 1377 aa34.39■■■■□ 3.1
RNF170-201ENST00000240159 MTUS2Q5JR59 1369 aa34.38■■■■□ 3.09
RNF170-201ENST00000240159 CCNB3Q8WWL7 1395 aa34.38■■■■□ 3.09
RNF170-201ENST00000240159 RAPGEF6Q8TEU7 1601 aa34.36■■■■□ 3.09
RNF170-201ENST00000240159 PRG4Q92954 1404 aaPredicted RBP34.32■■■■□ 3.08
RNF170-201ENST00000240159 EHBP1L1Q8N3D4 1523 aa34.32■■■■□ 3.08
RNF170-201ENST00000240159 CDK13Q14004 1512 aaKnown RBP34.31■■■■□ 3.08
RNF170-201ENST00000240159 SHROOM2Q13796 1616 aa34.3■■■■□ 3.08
RNF170-201ENST00000240159 NUP153P49790 1475 aaKnown RBP34.3■■■■□ 3.08
RNF170-201ENST00000240159 MAGI3Q5TCQ9 1506 aa34.3■■■■□ 3.08
RNF170-201ENST00000240159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.26■■■■□ 3.08
RNF170-201ENST00000240159 PLB1Q6P1J6 1458 aa34.26■■■■□ 3.08
RNF170-201ENST00000240159 SUPT6HQ7KZ85 1726 aaKnown RBP34.23■■■■□ 3.07
RNF170-201ENST00000240159 CLASP1Q7Z460 1538 aa34.22■■■■□ 3.07
RNF170-201ENST00000240159 ARID3CA6NKF2 412 aa34.22■■■■□ 3.07
RNF170-201ENST00000240159 NCOA2Q15596 1464 aa34.21■■■■□ 3.07
RNF170-201ENST00000240159 ZEB1P37275 1124 aaPredicted RBP34.18■■■■□ 3.06
RNF170-201ENST00000240159 ABCA8O94911 1581 aa34.17■■■■□ 3.06
RNF170-201ENST00000240159 ARHGEF11O15085 1522 aa34.16■■■■□ 3.06
RNF170-201ENST00000240159 CCER1Q8TC90 406 aaPredicted RBP34.15■■■■□ 3.06
RNF170-201ENST00000240159 PTPRGP23470 1445 aa34.13■■■■□ 3.05
RNF170-201ENST00000240159 FGD6Q6ZV73 1430 aa34.11■■■■□ 3.05
RNF170-201ENST00000240159 MYOM3Q5VTT5 1437 aa34.09■■■■□ 3.05
RNF170-201ENST00000240159 FAM50AQ14320 339 aaKnown RBP34.08■■■■□ 3.05
RNF170-201ENST00000240159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.08■■■■□ 3.05
RNF170-201ENST00000240159 ERCC6L2Q5T890 1561 aa34.08■■■■□ 3.05
RNF170-201ENST00000240159 CDK11AQ9UQ88 783 aaPredicted RBP34.05■■■■□ 3.04
RNF170-201ENST00000240159 ITGAEP38570 1179 aa34.04■■■■□ 3.04
RNF170-201ENST00000240159 ATP10BO94823 1461 aa33.97■■■■□ 3.03
RNF170-201ENST00000240159 TROQ12816 1431 aaPredicted RBP33.96■■■■□ 3.03
RNF170-201ENST00000240159 UACAQ9BZF9 1416 aa33.94■■■■□ 3.02
RNF170-201ENST00000240159 PTPN23Q9H3S7 1636 aa33.91■■■■□ 3.02
RNF170-201ENST00000240159 MIA2Q96PC5 1412 aa33.87■■■■□ 3.01
RNF170-201ENST00000240159 ADCY10Q96PN6 1610 aa33.87■■■■□ 3.01
RNF170-201ENST00000240159 TCOF1Q13428 1488 aaKnown RBP33.87■■■■□ 3.01
RNF170-201ENST00000240159 ABCC2Q92887 1545 aa33.83■■■■□ 3.01
RNF170-201ENST00000240159 PLEKHD1A6NEE1 506 aa33.82■■■■□ 3.01
RNF170-201ENST00000240159 KIF14Q15058 1648 aa33.82■■■■□ 3
RNF170-201ENST00000240159 OSCARQ8IYS5 282 aa33.8■■■■□ 3
RNF170-201ENST00000240159 SETD5Q9C0A6 1442 aa33.78■■■■□ 3
RNF170-201ENST00000240159 RAB3GAP2Q9H2M9 1393 aa33.76■■■□□ 2.99
RNF170-201ENST00000240159 PTPRKQ15262 1439 aa33.76■■■□□ 2.99
RNF170-201ENST00000240159 DHX57Q6P158 1386 aaKnown RBP33.72■■■□□ 2.99
RNF170-201ENST00000240159 UHRF1BP1LA0JNW5 1464 aa33.72■■■□□ 2.99
RNF170-201ENST00000240159 ITSN2Q9NZM3 1697 aa33.71■■■□□ 2.99
RNF170-201ENST00000240159 GPATCH8Q9UKJ3 1502 aaKnown RBP33.7■■■□□ 2.99
RNF170-201ENST00000240159 ABCC10Q5T3U5 1492 aa33.67■■■□□ 2.98
RNF170-201ENST00000240159 HFM1A2PYH4 1435 aa33.61■■■□□ 2.97
RNF170-201ENST00000240159 CFDP1Q9UEE9 299 aaPredicted RBP33.61■■■□□ 2.97
RNF170-201ENST00000240159 KDM5BQ9UGL1 1544 aa33.61■■■□□ 2.97
RNF170-201ENST00000240159 ZCCHC11Q5TAX3 1644 aaKnown RBP33.6■■■□□ 2.97
RNF170-201ENST00000240159 ZNF644Q9H582 1327 aaPredicted RBP33.6■■■□□ 2.97
RNF170-201ENST00000240159 CDC42BPAQ5VT25 1732 aa33.59■■■□□ 2.97
RNF170-201ENST00000240159 CLSPNQ9HAW4 1339 aa33.58■■■□□ 2.97
RNF170-201ENST00000240159 CAMSAP2Q08AD1 1489 aa33.56■■■□□ 2.96
RNF170-201ENST00000240159 DNMT1P26358 1616 aaKnown RBP33.55■■■□□ 2.96
RNF170-201ENST00000240159 DAPK1P53355 1430 aa33.54■■■□□ 2.96
RNF170-201ENST00000240159 NAIPQ13075 1403 aa33.54■■■□□ 2.96
RNF170-201ENST00000240159 ABCC5O15440 1437 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms