RNA–Protein interactions for RNA: ENST00000239906.9

FAM53C-201, Transcript of family with sequence similarity 53 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM53C, Length 4,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53C-201ENST00000239906 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
FAM53C-201ENST00000239906 FKBP8Q14318 412 aa15.09■□□□□ 0.01
FAM53C-201ENST00000239906 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
FAM53C-201ENST00000239906 FAM9BQ8IZU0 186 aa15.05■□□□□ 0
FAM53C-201ENST00000239906 NEFMP07197 916 aa15.05■□□□□ -0
FAM53C-201ENST00000239906 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
FAM53C-201ENST00000239906 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
FAM53C-201ENST00000239906 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
FAM53C-201ENST00000239906 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
FAM53C-201ENST00000239906 CFDP1Q9UEE9 299 aaPredicted RBP15.04■□□□□ -0
FAM53C-201ENST00000239906 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
FAM53C-201ENST00000239906 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
FAM53C-201ENST00000239906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.012e-9■■■■■ 30.3
FAM53C-201ENST00000239906 MRS2Q9HD23 443 aa14.99□□□□□ -0.01
FAM53C-201ENST00000239906 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
FAM53C-201ENST00000239906 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
FAM53C-201ENST00000239906 BCL11AQ9H165 835 aa14.97□□□□□ -0.01
FAM53C-201ENST00000239906 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
FAM53C-201ENST00000239906 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
FAM53C-201ENST00000239906 SALL2Q9Y467 1007 aaPredicted RBP14.96□□□□□ -0.01
FAM53C-201ENST00000239906 SETD5Q9C0A6 1442 aa14.96□□□□□ -0.01
FAM53C-201ENST00000239906 KDM2AQ9Y2K7 1162 aa14.96□□□□□ -0.01
FAM53C-201ENST00000239906 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
FAM53C-201ENST00000239906 ARHGAP35Q9NRY4 1499 aa14.95□□□□□ -0.02
FAM53C-201ENST00000239906 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
FAM53C-201ENST00000239906 ESF1Q9H501 851 aaKnown RBP14.94□□□□□ -0.02
FAM53C-201ENST00000239906 ANP32AP39687 249 aaKnown RBP14.94□□□□□ -0.02
FAM53C-201ENST00000239906 KANK4Q5T7N3 995 aaPredicted RBP14.92□□□□□ -0.02
FAM53C-201ENST00000239906 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
FAM53C-201ENST00000239906 NPM2Q86SE8 214 aaKnown RBP14.9□□□□□ -0.02
FAM53C-201ENST00000239906 SIN3AQ96ST3 1273 aa14.89□□□□□ -0.03
FAM53C-201ENST00000239906 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
FAM53C-201ENST00000239906 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.87□□□□□ -0.03
FAM53C-201ENST00000239906 CDCA8Q53HL2 280 aa14.87□□□□□ -0.03
FAM53C-201ENST00000239906 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
FAM53C-201ENST00000239906 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
FAM53C-201ENST00000239906 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
FAM53C-201ENST00000239906 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
FAM53C-201ENST00000239906 KCNH8Q96L42 1107 aa14.85□□□□□ -0.03
FAM53C-201ENST00000239906 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
FAM53C-201ENST00000239906 CCDC136Q96JN2 1154 aa14.83□□□□□ -0.04
FAM53C-201ENST00000239906 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
FAM53C-201ENST00000239906 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
FAM53C-201ENST00000239906 CCER2I3L3R5 266 aa14.8□□□□□ -0.04
FAM53C-201ENST00000239906 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
FAM53C-201ENST00000239906 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
FAM53C-201ENST00000239906 UNC13AQ9UPW8 1703 aa14.78□□□□□ -0.04
FAM53C-201ENST00000239906 RGL3Q3MIN7 710 aa14.78□□□□□ -0.04
FAM53C-201ENST00000239906 SYNJ1O43426 1573 aa14.74□□□□□ -0.05
FAM53C-201ENST00000239906 FHOD3Q2V2M9 1422 aa14.74□□□□□ -0.05
FAM53C-201ENST00000239906 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
FAM53C-201ENST00000239906 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
FAM53C-201ENST00000239906 IGF1RP08069 1367 aa14.73□□□□□ -0.05
FAM53C-201ENST00000239906 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
FAM53C-201ENST00000239906 UPF2Q9HAU5 1272 aaKnown RBP14.72□□□□□ -0.05
FAM53C-201ENST00000239906 KNSTRNQ9Y448 316 aa14.71□□□□□ -0.05
FAM53C-201ENST00000239906 KIF21BO75037 1637 aa14.71□□□□□ -0.05
FAM53C-201ENST00000239906 SENP3-EIF4A1A0A087X0R7 540 aa14.7□□□□□ -0.06
FAM53C-201ENST00000239906 CCDC18Q5T9S5 1454 aa14.7□□□□□ -0.06
FAM53C-201ENST00000239906 RSPH4AQ5TD94 716 aa14.7□□□□□ -0.06
FAM53C-201ENST00000239906 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
FAM53C-201ENST00000239906 MPHOSPH9Q99550 1183 aa14.69□□□□□ -0.06
FAM53C-201ENST00000239906 DHX57Q6P158 1386 aaKnown RBP14.68□□□□□ -0.06
FAM53C-201ENST00000239906 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
FAM53C-201ENST00000239906 TRHP20396 242 aaPredicted RBP14.67□□□□□ -0.06
FAM53C-201ENST00000239906 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
FAM53C-201ENST00000239906 ERICH3Q5RHP9 1530 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 KANK1Q14678 1352 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 CFAP53Q96M91 514 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
FAM53C-201ENST00000239906 PKD2Q13563 968 aa14.65□□□□□ -0.06
FAM53C-201ENST00000239906 CFTRP13569 1480 aa14.65□□□□□ -0.06
FAM53C-201ENST00000239906 HSPA5P11021 654 aaKnown RBP14.64□□□□□ -0.07
FAM53C-201ENST00000239906 SUPT16HQ9Y5B9 1047 aaKnown RBP14.64□□□□□ -0.07
FAM53C-201ENST00000239906 TMF1P82094 1093 aa14.64□□□□□ -0.07
FAM53C-201ENST00000239906 DCAF11Q8TEB1 546 aa14.64□□□□□ -0.07
FAM53C-201ENST00000239906 EFCAB2Q5VUJ9 269 aa14.63□□□□□ -0.07
FAM53C-201ENST00000239906 HSP90AA1P07900 732 aaKnown RBP14.63□□□□□ -0.07
FAM53C-201ENST00000239906 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
FAM53C-201ENST00000239906 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
FAM53C-201ENST00000239906 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 GAPVD1Q14C86 1478 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 ERICH6BQ5W0A0 696 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 NUP155O75694 1391 aa14.6□□□□□ -0.07
FAM53C-201ENST00000239906 NBR1Q14596 966 aa14.59□□□□□ -0.07
FAM53C-201ENST00000239906 TOP2BQ02880 1626 aa14.57□□□□□ -0.08
FAM53C-201ENST00000239906 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
FAM53C-201ENST00000239906 L3MBTL2Q969R5 705 aa14.55□□□□□ -0.08
FAM53C-201ENST00000239906 NUDCQ9Y266 331 aa14.53□□□□□ -0.08
FAM53C-201ENST00000239906 ROCK2O75116 1388 aaKnown RBP14.52□□□□□ -0.08
FAM53C-201ENST00000239906 RALBP1Q15311 655 aa14.52□□□□□ -0.08
FAM53C-201ENST00000239906 DDRGK1Q96HY6 314 aa14.52□□□□□ -0.08
FAM53C-201ENST00000239906 CASKIN1Q8WXD9 1431 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 CUX1P39880 1505 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 LRRC9Q6ZRR7 1453 aa14.51□□□□□ -0.09
FAM53C-201ENST00000239906 FOXD1Q16676 465 aa14.5□□□□□ -0.09
FAM53C-201ENST00000239906 MYH16Q9H6N6 1097 aa14.5□□□□□ -0.09
FAM53C-201ENST00000239906 FGD6Q6ZV73 1430 aa14.5□□□□□ -0.09
FAM53C-201ENST00000239906 KTN1Q86UP2 1357 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 896.1 ms