RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
GGCX-201ENST00000233838 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
GGCX-201ENST00000233838 MRS2Q9HD23 443 aa10.55□□□□□ -0.72
GGCX-201ENST00000233838 TRIM44Q96DX7 344 aaPredicted RBP10.55□□□□□ -0.72
GGCX-201ENST00000233838 BECN1Q14457 450 aa10.53□□□□□ -0.72
GGCX-201ENST00000233838 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
GGCX-201ENST00000233838 ZRSR1Q15695 479 aaKnown RBP10.5□□□□□ -0.73
GGCX-201ENST00000233838 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
GGCX-201ENST00000233838 HIRIP3Q9BW71 556 aaPredicted RBP10.5□□□□□ -0.73
GGCX-201ENST00000233838 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
GGCX-201ENST00000233838 GOLGA6L22H0YM25 854 aa10.49□□□□□ -0.73
GGCX-201ENST00000233838 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
GGCX-201ENST00000233838 PPP1R15AO75807 674 aaPredicted RBP10.49□□□□□ -0.73
GGCX-201ENST00000233838 CASC1Q6TDU7 716 aa10.48□□□□□ -0.73
GGCX-201ENST00000233838 DNTTIP2Q5QJE6 756 aaKnown RBP10.48□□□□□ -0.73
GGCX-201ENST00000233838 TSPY4P0CV99 314 aa10.46□□□□□ -0.74
GGCX-201ENST00000233838 TSPY10P0CW01 314 aa10.46□□□□□ -0.74
GGCX-201ENST00000233838 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
GGCX-201ENST00000233838 TNNT2P45379 298 aaPredicted RBP10.45□□□□□ -0.74
GGCX-201ENST00000233838 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
GGCX-201ENST00000233838 PPM1GO15355 546 aaPredicted RBP10.43□□□□□ -0.74
GGCX-201ENST00000233838 FTSJ3Q8IY81 847 aaKnown RBP10.42□□□□□ -0.74
GGCX-201ENST00000233838 ANP32EQ9BTT0 268 aa10.42□□□□□ -0.74
GGCX-201ENST00000233838 NPHP1O15259 732 aa10.42□□□□□ -0.74
GGCX-201ENST00000233838 RB1CC1Q8TDY2 1594 aa10.41□□□□□ -0.74
GGCX-201ENST00000233838 MTUS2Q5JR59 1369 aa10.41□□□□□ -0.74
GGCX-201ENST00000233838 RRP7BPQ9NSQ0 103 aa10.4□□□□□ -0.74
GGCX-201ENST00000233838 PLCB2Q00722 1185 aa10.4□□□□□ -0.74
GGCX-201ENST00000233838 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.75
GGCX-201ENST00000233838 MIER1Q8N108 512 aa10.4□□□□□ -0.75
GGCX-201ENST00000233838 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
GGCX-201ENST00000233838 NAP1L5Q96NT1 182 aaPredicted RBP10.39□□□□□ -0.75
GGCX-201ENST00000233838 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
GGCX-201ENST00000233838 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
GGCX-201ENST00000233838 NACADO15069 1562 aa10.38□□□□□ -0.75
GGCX-201ENST00000233838 MYO15BQ96JP2 1530 aa10.38□□□□□ -0.75
GGCX-201ENST00000233838 RGL3Q3MIN7 710 aa10.38□□□□□ -0.75
GGCX-201ENST00000233838 NCBP3Q53F19 620 aaKnown RBP10.38□□□□□ -0.75
GGCX-201ENST00000233838 CHMP7Q8WUX9 453 aaPredicted RBP10.37□□□□□ -0.75
GGCX-201ENST00000233838 NAP1L2Q9ULW6 460 aaPredicted RBP10.37□□□□□ -0.75
GGCX-201ENST00000233838 GOLGA6L6A8MZA4 724 aa10.37□□□□□ -0.75
GGCX-201ENST00000233838 NEUROD2Q15784 382 aa10.36□□□□□ -0.75
GGCX-201ENST00000233838 CLSTN1O94985 981 aa10.35□□□□□ -0.75
GGCX-201ENST00000233838 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
GGCX-201ENST00000233838 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
GGCX-201ENST00000233838 KNSTRNQ9Y448 316 aa10.35□□□□□ -0.75
GGCX-201ENST00000233838 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
GGCX-201ENST00000233838 RTN4Q9NQC3 1192 aaKnown RBP10.34□□□□□ -0.75
GGCX-201ENST00000233838 MAPK8IP3Q9UPT6 1336 aa10.34□□□□□ -0.75
GGCX-201ENST00000233838 RSF1Q96T23 1441 aaPredicted RBP10.34□□□□□ -0.75
GGCX-201ENST00000233838 FGD1P98174 961 aa10.33□□□□□ -0.76
GGCX-201ENST00000233838 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
GGCX-201ENST00000233838 FRAT1Q92837 279 aaPredicted RBP10.31□□□□□ -0.76
GGCX-201ENST00000233838 RGS3P49796 1198 aa10.31□□□□□ -0.76
GGCX-201ENST00000233838 KCNJ4P48050 445 aa10.31□□□□□ -0.76
GGCX-201ENST00000233838 SUPT16HQ9Y5B9 1047 aaKnown RBP10.31□□□□□ -0.76
GGCX-201ENST00000233838 EEA1Q15075 1411 aa10.31□□□□□ -0.76
GGCX-201ENST00000233838 CDCA8Q53HL2 280 aa10.29□□□□□ -0.76
GGCX-201ENST00000233838 CC2D1BQ5T0F9 858 aaKnown RBP10.28□□□□□ -0.76
GGCX-201ENST00000233838 POGKQ9P215 609 aa10.28□□□□□ -0.76
GGCX-201ENST00000233838 CARD11Q9BXL7 1154 aa10.28□□□□□ -0.76
GGCX-201ENST00000233838 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.76
GGCX-201ENST00000233838 ERICH6BQ5W0A0 696 aa10.27□□□□□ -0.76
GGCX-201ENST00000233838 NUDCQ9Y266 331 aa10.27□□□□□ -0.77
GGCX-201ENST00000233838 ISY1Q9ULR0 285 aaKnown RBP10.26□□□□□ -0.77
GGCX-201ENST00000233838 DRC7Q8IY82 874 aa10.26□□□□□ -0.77
GGCX-201ENST00000233838 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
GGCX-201ENST00000233838 U2SURPO15042 1029 aaKnown RBP10.26□□□□□ -0.77
GGCX-201ENST00000233838 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
GGCX-201ENST00000233838 GOLGA6L4A6NEF3 574 aa10.25□□□□□ -0.77
GGCX-201ENST00000233838 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
GGCX-201ENST00000233838 NRDCO43847 1150 aa10.25□□□□□ -0.77
GGCX-201ENST00000233838 CLIP1P30622 1438 aa10.24□□□□□ -0.77
GGCX-201ENST00000233838 NOP58Q9Y2X3 529 aaKnown RBP10.24□□□□□ -0.77
GGCX-201ENST00000233838 CHAF1AQ13111 956 aaPredicted RBP10.24□□□□□ -0.77
GGCX-201ENST00000233838 HSCBQ8IWL3 235 aa10.23□□□□□ -0.77
GGCX-201ENST00000233838 CHMP4BQ9H444 224 aaKnown RBP10.22□□□□□ -0.77
GGCX-201ENST00000233838 SOX12O15370 315 aa10.22□□□□□ -0.77
GGCX-201ENST00000233838 MSNP26038 577 aaKnown RBP10.22□□□□□ -0.77
GGCX-201ENST00000233838 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
GGCX-201ENST00000233838 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.77
GGCX-201ENST00000233838 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
GGCX-201ENST00000233838 CEP162Q5TB80 1403 aa10.21□□□□□ -0.78
GGCX-201ENST00000233838 MCCP23508 829 aa10.21□□□□□ -0.78
GGCX-201ENST00000233838 PPP4R2Q9NY27 417 aa10.2□□□□□ -0.78
GGCX-201ENST00000233838 MS4A1P11836 297 aa10.2□□□□□ -0.78
GGCX-201ENST00000233838 CFDP1Q9UEE9 299 aaPredicted RBP10.19□□□□□ -0.78
GGCX-201ENST00000233838 KIAA2012Q0VF49 1180 aa10.18□□□□□ -0.78
GGCX-201ENST00000233838 B4GALNT3Q6L9W6 998 aa10.16□□□□□ -0.78
GGCX-201ENST00000233838 NOC3LQ8WTT2 800 aaKnown RBP10.16□□□□□ -0.78
GGCX-201ENST00000233838 TNIKQ9UKE5 1360 aa10.16□□□□□ -0.78
GGCX-201ENST00000233838 CEP164Q9UPV0 1460 aa10.16□□□□□ -0.78
GGCX-201ENST00000233838 L1TD1Q5T7N2 865 aaKnown RBP10.16□□□□□ -0.78
GGCX-201ENST00000233838 PRM3Q9NNZ6 103 aa10.16□□□□□ -0.78
GGCX-201ENST00000233838 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
GGCX-201ENST00000233838 APBB1O00213 710 aa10.15□□□□□ -0.78
GGCX-201ENST00000233838 BAZ1BQ9UIG0 1483 aaKnown RBP10.15□□□□□ -0.78
GGCX-201ENST00000233838 SRPK2P78362 688 aaKnown RBP10.14□□□□□ -0.79
GGCX-201ENST00000233838 RTF1Q92541 710 aaKnown RBP10.14□□□□□ -0.79
GGCX-201ENST00000233838 ARID3AQ99856 593 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms