RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 SETD5Q9C0A6 1442 aa17.78■□□□□ 0.44
PITRM1-201ENST00000224949 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
PITRM1-201ENST00000224949 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
PITRM1-201ENST00000224949 ARHGAP35Q9NRY4 1499 aa17.77■□□□□ 0.44
PITRM1-201ENST00000224949 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
PITRM1-201ENST00000224949 MAPKBP1O60336 1514 aa17.76■□□□□ 0.43
PITRM1-201ENST00000224949 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
PITRM1-201ENST00000224949 HNRNPUQ00839 825 aaKnown RBP eCLIP17.73■□□□□ 0.43
PITRM1-201ENST00000224949 CUX2O14529 1486 aa17.71■□□□□ 0.43
PITRM1-201ENST00000224949 PHLDB1Q86UU1 1377 aa17.7■□□□□ 0.42
PITRM1-201ENST00000224949 TONSLQ96HA7 1378 aa17.68■□□□□ 0.42
PITRM1-201ENST00000224949 CUX1P39880 1505 aa17.67■□□□□ 0.42
PITRM1-201ENST00000224949 CCER2I3L3R5 266 aa17.66■□□□□ 0.42
PITRM1-201ENST00000224949 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
PITRM1-201ENST00000224949 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.42
PITRM1-201ENST00000224949 MSH5O43196 834 aa17.63■□□□□ 0.41
PITRM1-201ENST00000224949 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
PITRM1-201ENST00000224949 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
PITRM1-201ENST00000224949 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
PITRM1-201ENST00000224949 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.4
PITRM1-201ENST00000224949 IGF1RP08069 1367 aa17.56■□□□□ 0.4
PITRM1-201ENST00000224949 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
PITRM1-201ENST00000224949 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
PITRM1-201ENST00000224949 FHOD3Q2V2M9 1422 aa17.51■□□□□ 0.39
PITRM1-201ENST00000224949 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
PITRM1-201ENST00000224949 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
PITRM1-201ENST00000224949 CHIC2Q9UKJ5 165 aa17.48■□□□□ 0.39
PITRM1-201ENST00000224949 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
PITRM1-201ENST00000224949 RRP7BPQ9NSQ0 103 aa17.45■□□□□ 0.38
PITRM1-201ENST00000224949 HSPA5P11021 654 aaKnown RBP17.44■□□□□ 0.38
PITRM1-201ENST00000224949 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
PITRM1-201ENST00000224949 MTUS2Q5JR59 1369 aa17.44■□□□□ 0.38
PITRM1-201ENST00000224949 PCF11O94913 1555 aaKnown RBP17.42■□□□□ 0.38
PITRM1-201ENST00000224949 NBR1Q14596 966 aa17.42■□□□□ 0.38
PITRM1-201ENST00000224949 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
PITRM1-201ENST00000224949 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
PITRM1-201ENST00000224949 FANCIQ9NVI1 1328 aa17.41■□□□□ 0.38
PITRM1-201ENST00000224949 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
PITRM1-201ENST00000224949 CFTRP13569 1480 aa17.4■□□□□ 0.38
PITRM1-201ENST00000224949 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
PITRM1-201ENST00000224949 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
PITRM1-201ENST00000224949 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
PITRM1-201ENST00000224949 ARID3CA6NKF2 412 aa17.38■□□□□ 0.37
PITRM1-201ENST00000224949 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
PITRM1-201ENST00000224949 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
PITRM1-201ENST00000224949 FOXD1Q16676 465 aa17.37■□□□□ 0.37
PITRM1-201ENST00000224949 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
PITRM1-201ENST00000224949 FGD6Q6ZV73 1430 aa17.35■□□□□ 0.37
PITRM1-201ENST00000224949 DEKP35659 375 aaKnown RBP17.32■□□□□ 0.36
PITRM1-201ENST00000224949 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
PITRM1-201ENST00000224949 UACAQ9BZF9 1416 aa17.32■□□□□ 0.36
PITRM1-201ENST00000224949 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
PITRM1-201ENST00000224949 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.365e-7■■■■■ 28.3
PITRM1-201ENST00000224949 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
PITRM1-201ENST00000224949 C11orf95C9JLR9 678 aaPredicted RBP17.27■□□□□ 0.36
PITRM1-201ENST00000224949 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.35
PITRM1-201ENST00000224949 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.35
PITRM1-201ENST00000224949 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
PITRM1-201ENST00000224949 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
PITRM1-201ENST00000224949 FYCO1Q9BQS8 1478 aa17.26■□□□□ 0.35
PITRM1-201ENST00000224949 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
PITRM1-201ENST00000224949 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
PITRM1-201ENST00000224949 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
PITRM1-201ENST00000224949 NAIPQ13075 1403 aa17.24■□□□□ 0.35
PITRM1-201ENST00000224949 NOP58Q9Y2X3 529 aaKnown RBP17.24■□□□□ 0.35
PITRM1-201ENST00000224949 FMN1Q68DA7 1419 aa17.23■□□□□ 0.35
PITRM1-201ENST00000224949 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
PITRM1-201ENST00000224949 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
PITRM1-201ENST00000224949 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
PITRM1-201ENST00000224949 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
PITRM1-201ENST00000224949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.34
PITRM1-201ENST00000224949 CNTLNQ9NXG0 1405 aa17.2■□□□□ 0.34
PITRM1-201ENST00000224949 MPHOSPH9Q99550 1183 aa17.19■□□□□ 0.34
PITRM1-201ENST00000224949 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
PITRM1-201ENST00000224949 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
PITRM1-201ENST00000224949 NPM2Q86SE8 214 aaKnown RBP17.18■□□□□ 0.34
PITRM1-201ENST00000224949 ANP32AP39687 249 aaKnown RBP17.17■□□□□ 0.34
PITRM1-201ENST00000224949 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
PITRM1-201ENST00000224949 RTL5Q5HYW3 569 aaPredicted RBP17.17■□□□□ 0.34
PITRM1-201ENST00000224949 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
PITRM1-201ENST00000224949 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
PITRM1-201ENST00000224949 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
PITRM1-201ENST00000224949 MYT1LQ9UL68 1186 aa17.14■□□□□ 0.33
PITRM1-201ENST00000224949 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
PITRM1-201ENST00000224949 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
PITRM1-201ENST00000224949 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
PITRM1-201ENST00000224949 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
PITRM1-201ENST00000224949 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
PITRM1-201ENST00000224949 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
PITRM1-201ENST00000224949 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
PITRM1-201ENST00000224949 KDM5BQ9UGL1 1544 aa17.1■□□□□ 0.33
PITRM1-201ENST00000224949 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
PITRM1-201ENST00000224949 NUDCQ9Y266 331 aa17.06■□□□□ 0.32
PITRM1-201ENST00000224949 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
PITRM1-201ENST00000224949 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
PITRM1-201ENST00000224949 NCOA1Q15788 1441 aa17.05■□□□□ 0.32
PITRM1-201ENST00000224949 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
PITRM1-201ENST00000224949 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
PITRM1-201ENST00000224949 LAS1LQ9Y4W2 734 aaKnown RBP17.02■□□□□ 0.32
PITRM1-201ENST00000224949 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms