RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 ARHGAP35Q9NRY4 1499 aa37.73■■■■□ 3.63
GSK3A-201ENST00000222330 PCGF6Q9BYE7 350 aa37.72■■■■□ 3.63
GSK3A-201ENST00000222330 VPS8Q8N3P4 1428 aa37.71■■■■□ 3.63
GSK3A-201ENST00000222330 CTTNBP2Q8WZ74 1663 aa37.7■■■■□ 3.63
GSK3A-201ENST00000222330 CHMP7Q8WUX9 453 aaPredicted RBP37.65■■■■□ 3.62
GSK3A-201ENST00000222330 SYNJ2O15056 1496 aa37.63■■■■□ 3.62
GSK3A-201ENST00000222330 P3H3Q8IVL6 736 aa37.6■■■■□ 3.61
GSK3A-201ENST00000222330 TRIM26Q12899 539 aaPredicted RBP37.59■■■■□ 3.61
GSK3A-201ENST00000222330 TTBK1Q5TCY1 1321 aaPredicted RBP37.58■■■■□ 3.61
GSK3A-201ENST00000222330 GRIN2AQ12879 1464 aa37.57■■■■□ 3.6
GSK3A-201ENST00000222330 CHD1O14646 1710 aa37.53■■■■□ 3.6
GSK3A-201ENST00000222330 FHOD3Q2V2M9 1422 aa37.42■■■■□ 3.58
GSK3A-201ENST00000222330 APLP2Q06481 763 aa37.41■■■■□ 3.58
GSK3A-201ENST00000222330 CEP170Q5SW79 1584 aa37.4■■■■□ 3.58
GSK3A-201ENST00000222330 EFCAB5A4FU69 1503 aa37.4■■■■□ 3.58
GSK3A-201ENST00000222330 IQGAP2Q13576 1575 aa37.38■■■■□ 3.57
GSK3A-201ENST00000222330 SAMD9Q5K651 1589 aa37.31■■■■□ 3.56
GSK3A-201ENST00000222330 NUP160Q12769 1436 aa37.3■■■■□ 3.56
GSK3A-201ENST00000222330 KIAA0586Q9BVV6 1533 aa37.3■■■■□ 3.56
GSK3A-201ENST00000222330 ATP1B4Q9UN42 357 aaPredicted RBP37.19■■■■□ 3.54
GSK3A-201ENST00000222330 KANK4Q5T7N3 995 aaPredicted RBP37.18■■■■□ 3.54
GSK3A-201ENST00000222330 UGGT2Q9NYU1 1516 aa37.16■■■■□ 3.54
GSK3A-201ENST00000222330 PCF11O94913 1555 aaKnown RBP37.16■■■■□ 3.54
GSK3A-201ENST00000222330 FMN1Q68DA7 1419 aa37.12■■■■□ 3.53
GSK3A-201ENST00000222330 JPH4Q96JJ6 628 aa37.07■■■■□ 3.53
GSK3A-201ENST00000222330 CASKIN1Q8WXD9 1431 aa37.07■■■■□ 3.52
GSK3A-201ENST00000222330 DISP1Q96F81 1524 aa37.06■■■■□ 3.52
GSK3A-201ENST00000222330 OSCARQ8IYS5 282 aa37.04■■■■□ 3.52
GSK3A-201ENST00000222330 FYCO1Q9BQS8 1478 aa37.03■■■■□ 3.52
GSK3A-201ENST00000222330 CLASP1Q7Z460 1538 aa37.02■■■■□ 3.52
GSK3A-201ENST00000222330 TIAM1Q13009 1591 aa37■■■■□ 3.51
GSK3A-201ENST00000222330 KIAA0556O60303 1618 aa37■■■■□ 3.51
GSK3A-201ENST00000222330 MAP3K1Q13233 1512 aa36.94■■■■□ 3.5
GSK3A-201ENST00000222330 PRG4Q92954 1404 aaPredicted RBP36.89■■■■□ 3.5
GSK3A-201ENST00000222330 SHROOM2Q13796 1616 aa36.88■■■■□ 3.49
GSK3A-201ENST00000222330 CFAP43Q8NDM7 1665 aa36.87■■■■□ 3.49
GSK3A-201ENST00000222330 LRRC9Q6ZRR7 1453 aa36.86■■■■□ 3.49
GSK3A-201ENST00000222330 ERCC6L2Q5T890 1561 aa36.85■■■■□ 3.49
GSK3A-201ENST00000222330 LRRIQ1Q96JM4 1722 aa36.85■■■■□ 3.49
GSK3A-201ENST00000222330 CARMIL2Q6F5E8 1435 aa36.83■■■■□ 3.49
GSK3A-201ENST00000222330 ARID3CA6NKF2 412 aa36.77■■■■□ 3.48
GSK3A-201ENST00000222330 HECW1Q76N89 1606 aa36.72■■■■□ 3.47
GSK3A-201ENST00000222330 EPRSP07814 1512 aaKnown RBP36.66■■■■□ 3.46
GSK3A-201ENST00000222330 PLB1Q6P1J6 1458 aa36.65■■■■□ 3.46
GSK3A-201ENST00000222330 MTUS2Q5JR59 1369 aa36.64■■■■□ 3.46
GSK3A-201ENST00000222330 RAPGEF6Q8TEU7 1601 aa36.64■■■■□ 3.46
GSK3A-201ENST00000222330 CDK13Q14004 1512 aaKnown RBP36.64■■■■□ 3.46
GSK3A-201ENST00000222330 CCDC18Q5T9S5 1454 aa36.63■■■■□ 3.45
GSK3A-201ENST00000222330 HNRNPUL2Q1KMD3 747 aaKnown RBP36.62■■■■□ 3.45
GSK3A-201ENST00000222330 NUP153P49790 1475 aaKnown RBP36.6■■■■□ 3.45
GSK3A-201ENST00000222330 PHLDB1Q86UU1 1377 aa36.6■■■■□ 3.45
GSK3A-201ENST00000222330 MAGI3Q5TCQ9 1506 aa36.56■■■■□ 3.44
GSK3A-201ENST00000222330 RRBP1Q9P2E9 1410 aaKnown RBP36.56■■■■□ 3.44
GSK3A-201ENST00000222330 HRCP23327 699 aa36.56■■■■□ 3.44
GSK3A-201ENST00000222330 PTPRGP23470 1445 aa36.55■■■■□ 3.44
GSK3A-201ENST00000222330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.51■■■■□ 3.44
GSK3A-201ENST00000222330 CCNB3Q8WWL7 1395 aa36.5■■■■□ 3.43
GSK3A-201ENST00000222330 EHBP1L1Q8N3D4 1523 aa36.46■■■■□ 3.43
GSK3A-201ENST00000222330 ABCA8O94911 1581 aa36.46■■■■□ 3.43
GSK3A-201ENST00000222330 ARHGEF11O15085 1522 aa36.45■■■■□ 3.43
GSK3A-201ENST00000222330 NCOA2Q15596 1464 aa36.42■■■■□ 3.42
GSK3A-201ENST00000222330 SUPT6HQ7KZ85 1726 aaKnown RBP36.4■■■■□ 3.42
GSK3A-201ENST00000222330 ITGAEP38570 1179 aa36.37■■■■□ 3.41
GSK3A-201ENST00000222330 RIMBP3CA6NJZ7 1639 aa36.35■■■■□ 3.41
GSK3A-201ENST00000222330 RIMBP3BA6NNM3 1639 aa36.35■■■■□ 3.41
GSK3A-201ENST00000222330 RIMBP3Q9UFD9 1639 aa36.35■■■■□ 3.41
GSK3A-201ENST00000222330 FAM50AQ14320 339 aaKnown RBP36.35■■■■□ 3.41
GSK3A-201ENST00000222330 CDK11AQ9UQ88 783 aaPredicted RBP36.33■■■■□ 3.41
GSK3A-201ENST00000222330 UACAQ9BZF9 1416 aa36.31■■■■□ 3.4
GSK3A-201ENST00000222330 ATP10BO94823 1461 aa36.3■■■■□ 3.4
GSK3A-201ENST00000222330 FGD6Q6ZV73 1430 aa36.27■■■■□ 3.4
GSK3A-201ENST00000222330 MYOM3Q5VTT5 1437 aa36.25■■■■□ 3.39
GSK3A-201ENST00000222330 CYB5RLQ6IPT4 315 aa36.22■■■■□ 3.39
GSK3A-201ENST00000222330 TROQ12816 1431 aaPredicted RBP36.21■■■■□ 3.39
GSK3A-201ENST00000222330 ABCC2Q92887 1545 aa36.2■■■■□ 3.39
GSK3A-201ENST00000222330 PLEKHD1A6NEE1 506 aa36.17■■■■□ 3.38
GSK3A-201ENST00000222330 CCER1Q8TC90 406 aaPredicted RBP36.17■■■■□ 3.38
GSK3A-201ENST00000222330 ADCY10Q96PN6 1610 aa36.17■■■■□ 3.38
GSK3A-201ENST00000222330 UHRF1BP1LA0JNW5 1464 aa36.1■■■■□ 3.37
GSK3A-201ENST00000222330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.1■■■■□ 3.37
GSK3A-201ENST00000222330 KIF14Q15058 1648 aa36.1■■■■□ 3.37
GSK3A-201ENST00000222330 PTPN23Q9H3S7 1636 aa36.07■■■■□ 3.36
GSK3A-201ENST00000222330 ZCCHC11Q5TAX3 1644 aaKnown RBP36.03■■■■□ 3.36
GSK3A-201ENST00000222330 KDM5BQ9UGL1 1544 aa36■■■■□ 3.35
GSK3A-201ENST00000222330 MIA2Q96PC5 1412 aa35.99■■■■□ 3.35
GSK3A-201ENST00000222330 TCOF1Q13428 1488 aaKnown RBP35.96■■■■□ 3.35
GSK3A-201ENST00000222330 PTPRKQ15262 1439 aa35.95■■■■□ 3.35
GSK3A-201ENST00000222330 ZNF644Q9H582 1327 aaPredicted RBP35.94■■■■□ 3.34
GSK3A-201ENST00000222330 ZEB1P37275 1124 aaPredicted RBP35.93■■■■□ 3.34
GSK3A-201ENST00000222330 GPATCH8Q9UKJ3 1502 aaKnown RBP35.93■■■■□ 3.34
GSK3A-201ENST00000222330 DNAJC5Q9H3Z4 198 aa35.93■■■■□ 3.34
GSK3A-201ENST00000222330 CFDP1Q9UEE9 299 aaPredicted RBP35.91■■■■□ 3.34
GSK3A-201ENST00000222330 ABCC10Q5T3U5 1492 aa35.9■■■■□ 3.34
GSK3A-201ENST00000222330 NPM1P06748 294 aaKnown RBP eCLIP35.86■■■■□ 3.33
GSK3A-201ENST00000222330 KCNH8Q96L42 1107 aa35.86■■■■□ 3.33
GSK3A-201ENST00000222330 RAB3GAP2Q9H2M9 1393 aa35.85■■■■□ 3.33
GSK3A-201ENST00000222330 ZNF777Q9ULD5 760 aaPredicted RBP35.85■■■■□ 3.33
GSK3A-201ENST00000222330 SETD5Q9C0A6 1442 aa35.84■■■■□ 3.33
GSK3A-201ENST00000222330 ITSN2Q9NZM3 1697 aa35.84■■■■□ 3.33
GSK3A-201ENST00000222330 CDC42BPAQ5VT25 1732 aa35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms