RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 C14orf37Q86TY3 774 aa18.17■□□□□ 0.5
TGFBR3-201ENST00000212355 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.16■□□□□ 0.5
TGFBR3-201ENST00000212355 SUPT16HQ9Y5B9 1047 aaKnown RBP18.16■□□□□ 0.5
TGFBR3-201ENST00000212355 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
TGFBR3-201ENST00000212355 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
TGFBR3-201ENST00000212355 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
TGFBR3-201ENST00000212355 NEUROD2Q15784 382 aa18.1■□□□□ 0.49
TGFBR3-201ENST00000212355 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
TGFBR3-201ENST00000212355 NCLP19338 710 aaKnown RBP18.1■□□□□ 0.49
TGFBR3-201ENST00000212355 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
TGFBR3-201ENST00000212355 TNNT2P45379 298 aaPredicted RBP18.06■□□□□ 0.48
TGFBR3-201ENST00000212355 MTUS2Q5JR59 1369 aa18.05■□□□□ 0.48
TGFBR3-201ENST00000212355 SIN3AQ96ST3 1273 aa18.04■□□□□ 0.48
TGFBR3-201ENST00000212355 EIF4G2P78344 907 aaKnown RBP eCLIP18.02■□□□□ 0.476e-7■■■■■ 31.9
TGFBR3-201ENST00000212355 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
TGFBR3-201ENST00000212355 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
TGFBR3-201ENST00000212355 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
TGFBR3-201ENST00000212355 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
TGFBR3-201ENST00000212355 RGS3P49796 1198 aa17.99■□□□□ 0.47
TGFBR3-201ENST00000212355 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
TGFBR3-201ENST00000212355 GLIPR1L2Q4G1C9 344 aa17.96■□□□□ 0.47
TGFBR3-201ENST00000212355 CLIP1P30622 1438 aa17.96■□□□□ 0.47
TGFBR3-201ENST00000212355 B4GALNT3Q6L9W6 998 aa17.95■□□□□ 0.46
TGFBR3-201ENST00000212355 SPRYD3Q8NCJ5 442 aa17.95■□□□□ 0.46
TGFBR3-201ENST00000212355 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
TGFBR3-201ENST00000212355 FRAT1Q92837 279 aaPredicted RBP17.92■□□□□ 0.46
TGFBR3-201ENST00000212355 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
TGFBR3-201ENST00000212355 TRIM44Q96DX7 344 aaPredicted RBP17.91■□□□□ 0.46
TGFBR3-201ENST00000212355 ANP32EQ9BTT0 268 aa17.9■□□□□ 0.46
TGFBR3-201ENST00000212355 PPP1R15AO75807 674 aaPredicted RBP17.9■□□□□ 0.46
TGFBR3-201ENST00000212355 PLCB2Q00722 1185 aa17.88■□□□□ 0.45
TGFBR3-201ENST00000212355 ARID4BQ4LE39 1312 aaPredicted RBP17.88■□□□□ 0.45
TGFBR3-201ENST00000212355 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
TGFBR3-201ENST00000212355 BECN1Q14457 450 aa17.85■□□□□ 0.45
TGFBR3-201ENST00000212355 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
TGFBR3-201ENST00000212355 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
TGFBR3-201ENST00000212355 PTMAP06454 111 aaKnown RBP17.85■□□□□ 0.45
TGFBR3-201ENST00000212355 SOX12O15370 315 aa17.84■□□□□ 0.45
TGFBR3-201ENST00000212355 DNTTIP2Q5QJE6 756 aaKnown RBP17.83■□□□□ 0.45
TGFBR3-201ENST00000212355 DDRGK1Q96HY6 314 aa17.83■□□□□ 0.45
TGFBR3-201ENST00000212355 NAP1L5Q96NT1 182 aaPredicted RBP17.83■□□□□ 0.45
TGFBR3-201ENST00000212355 LMOD2Q6P5Q4 547 aa17.82■□□□□ 0.44
TGFBR3-201ENST00000212355 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
TGFBR3-201ENST00000212355 KNSTRNQ9Y448 316 aa17.8■□□□□ 0.44
TGFBR3-201ENST00000212355 SAFB2Q14151 953 aaKnown RBP eCLIP17.77■□□□□ 0.43
TGFBR3-201ENST00000212355 FOXD1Q16676 465 aa17.76■□□□□ 0.43
TGFBR3-201ENST00000212355 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
TGFBR3-201ENST00000212355 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
TGFBR3-201ENST00000212355 CDK11BP21127 795 aaKnown RBP17.75■□□□□ 0.43
TGFBR3-201ENST00000212355 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
TGFBR3-201ENST00000212355 ARID3AQ99856 593 aa17.74■□□□□ 0.43
TGFBR3-201ENST00000212355 NAP1L2Q9ULW6 460 aaPredicted RBP17.74■□□□□ 0.43
TGFBR3-201ENST00000212355 GOLGA6L22H0YM25 854 aa17.71■□□□□ 0.43
TGFBR3-201ENST00000212355 APBB1O00213 710 aa17.7■□□□□ 0.42
TGFBR3-201ENST00000212355 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
TGFBR3-201ENST00000212355 HSP90AB1P08238 724 aaKnown RBP17.69■□□□□ 0.42
TGFBR3-201ENST00000212355 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
TGFBR3-201ENST00000212355 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
TGFBR3-201ENST00000212355 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
TGFBR3-201ENST00000212355 PLEKHD1A6NEE1 506 aa17.67■□□□□ 0.42
TGFBR3-201ENST00000212355 MAPK8IP3Q9UPT6 1336 aa17.66■□□□□ 0.42
TGFBR3-201ENST00000212355 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
TGFBR3-201ENST00000212355 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.65■□□□□ 0.42
TGFBR3-201ENST00000212355 CASC1Q6TDU7 716 aa17.65■□□□□ 0.42
TGFBR3-201ENST00000212355 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
TGFBR3-201ENST00000212355 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
TGFBR3-201ENST00000212355 ZRSR1Q15695 479 aaKnown RBP17.64■□□□□ 0.41
TGFBR3-201ENST00000212355 DEKP35659 375 aaKnown RBP17.64■□□□□ 0.41
TGFBR3-201ENST00000212355 POGKQ9P215 609 aa17.64■□□□□ 0.41
TGFBR3-201ENST00000212355 MLECQ14165 292 aa17.63■□□□□ 0.41
TGFBR3-201ENST00000212355 GZF1Q9H116 711 aaPredicted RBP17.61■□□□□ 0.41
TGFBR3-201ENST00000212355 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
TGFBR3-201ENST00000212355 RBM19Q9Y4C8 960 aaKnown RBP17.6■□□□□ 0.41
TGFBR3-201ENST00000212355 NPHP1O15259 732 aa17.57■□□□□ 0.4
TGFBR3-201ENST00000212355 STK26Q9P289 416 aa17.57■□□□□ 0.4
TGFBR3-201ENST00000212355 FGD1P98174 961 aa17.56■□□□□ 0.4
TGFBR3-201ENST00000212355 KCNJ4P48050 445 aa17.56■□□□□ 0.4
TGFBR3-201ENST00000212355 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
TGFBR3-201ENST00000212355 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
TGFBR3-201ENST00000212355 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
TGFBR3-201ENST00000212355 ERICH6BQ5W0A0 696 aa17.52■□□□□ 0.4
TGFBR3-201ENST00000212355 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.39
TGFBR3-201ENST00000212355 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
TGFBR3-201ENST00000212355 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
TGFBR3-201ENST00000212355 SRPK2P78362 688 aaKnown RBP17.51■□□□□ 0.39
TGFBR3-201ENST00000212355 NUTM2DQ5VT03 806 aaPredicted RBP17.49■□□□□ 0.39
TGFBR3-201ENST00000212355 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
TGFBR3-201ENST00000212355 KANK4Q5T7N3 995 aaPredicted RBP17.47■□□□□ 0.39
TGFBR3-201ENST00000212355 HSCBQ8IWL3 235 aa17.47■□□□□ 0.39
TGFBR3-201ENST00000212355 SOGA1O94964 1423 aa17.47■□□□□ 0.39
TGFBR3-201ENST00000212355 CDCA8Q53HL2 280 aa17.46■□□□□ 0.39
TGFBR3-201ENST00000212355 CCDC146Q8IYE0 955 aa17.45■□□□□ 0.38
TGFBR3-201ENST00000212355 DRC7Q8IY82 874 aa17.45■□□□□ 0.38
TGFBR3-201ENST00000212355 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
TGFBR3-201ENST00000212355 ZNF330Q9Y3S2 320 aaPredicted RBP17.44■□□□□ 0.38
TGFBR3-201ENST00000212355 NOL8Q76FK4 1167 aaKnown RBP17.43■□□□□ 0.38
TGFBR3-201ENST00000212355 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
TGFBR3-201ENST00000212355 CLSTN1O94985 981 aa17.43■□□□□ 0.38
TGFBR3-201ENST00000212355 TMF1P82094 1093 aa17.42■□□□□ 0.38
TGFBR3-201ENST00000212355 ISY1Q9ULR0 285 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms