RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 CUL7Q14999 1698 aa15.37■□□□□ 0.05
CHERP-201ENST00000198939 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
CHERP-201ENST00000198939 RUSC2Q8N2Y8 1516 aa15.36■□□□□ 0.05
CHERP-201ENST00000198939 PBRM1Q86U86 1689 aa15.36■□□□□ 0.05
CHERP-201ENST00000198939 FBLN2P98095 1184 aa15.35■□□□□ 0.05
CHERP-201ENST00000198939 SYNJ2O15056 1496 aa15.34■□□□□ 0.05
CHERP-201ENST00000198939 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
CHERP-201ENST00000198939 PRXQ9BXM0 1461 aa15.29■□□□□ 0.04
CHERP-201ENST00000198939 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
CHERP-201ENST00000198939 UBTFP17480 764 aaKnown RBP15.26■□□□□ 0.03
CHERP-201ENST00000198939 GOLGA3Q08378 1498 aa15.26■□□□□ 0.03
CHERP-201ENST00000198939 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
CHERP-201ENST00000198939 KIF21BO75037 1637 aa15.26■□□□□ 0.03
CHERP-201ENST00000198939 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
CHERP-201ENST00000198939 TTBK1Q5TCY1 1321 aaPredicted RBP15.23■□□□□ 0.03
CHERP-201ENST00000198939 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.02
CHERP-201ENST00000198939 NUP160Q12769 1436 aa15.17■□□□□ 0.02
CHERP-201ENST00000198939 KIAA0586Q9BVV6 1533 aa15.16■□□□□ 0.02
CHERP-201ENST00000198939 CHD1O14646 1710 aa15.15■□□□□ 0.02
CHERP-201ENST00000198939 TNIKQ9UKE5 1360 aa15.14■□□□□ 0.01
CHERP-201ENST00000198939 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
CHERP-201ENST00000198939 MIER1Q8N108 512 aa15.09■□□□□ 0.01
CHERP-201ENST00000198939 CEP170Q5SW79 1584 aa15.08■□□□□ 0
CHERP-201ENST00000198939 IQGAP2Q13576 1575 aa15.08■□□□□ 0
CHERP-201ENST00000198939 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
CHERP-201ENST00000198939 ERICH6Q7L0X2 663 aa15.07■□□□□ 0
CHERP-201ENST00000198939 BCL11AQ9H165 835 aa15.06■□□□□ 0
CHERP-201ENST00000198939 CTTNBP2Q8WZ74 1663 aa15.05■□□□□ 0
CHERP-201ENST00000198939 CLASP1Q7Z460 1538 aa15.03■□□□□ -0
CHERP-201ENST00000198939 ANP32EQ9BTT0 268 aa15.02□□□□□ -0.01
CHERP-201ENST00000198939 UGGT2Q9NYU1 1516 aa15.01□□□□□ -0.01
CHERP-201ENST00000198939 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
CHERP-201ENST00000198939 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
CHERP-201ENST00000198939 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
CHERP-201ENST00000198939 CLIP1P30622 1438 aa14.99□□□□□ -0.01
CHERP-201ENST00000198939 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
CHERP-201ENST00000198939 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
CHERP-201ENST00000198939 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
CHERP-201ENST00000198939 PTPRGP23470 1445 aa14.91□□□□□ -0.02
CHERP-201ENST00000198939 P3H3Q8IVL6 736 aa14.91□□□□□ -0.02
CHERP-201ENST00000198939 FMN1Q68DA7 1419 aa14.9□□□□□ -0.02
CHERP-201ENST00000198939 SUPT16HQ9Y5B9 1047 aaKnown RBP14.9□□□□□ -0.02
CHERP-201ENST00000198939 DISP1Q96F81 1524 aa14.89□□□□□ -0.03
CHERP-201ENST00000198939 KIAA0556O60303 1618 aa14.89□□□□□ -0.03
CHERP-201ENST00000198939 SAMD9Q5K651 1589 aa14.89□□□□□ -0.03
CHERP-201ENST00000198939 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
CHERP-201ENST00000198939 ARHGAP35Q9NRY4 1499 aa14.88□□□□□ -0.03
CHERP-201ENST00000198939 ARHGEF11O15085 1522 aa14.85□□□□□ -0.03
CHERP-201ENST00000198939 TSHZ2Q9NRE2 1034 aa14.85□□□□□ -0.03
CHERP-201ENST00000198939 FHOD3Q2V2M9 1422 aa14.85□□□□□ -0.03
CHERP-201ENST00000198939 APLP2Q06481 763 aa14.84□□□□□ -0.03
CHERP-201ENST00000198939 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
CHERP-201ENST00000198939 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHERP-201ENST00000198939 ATP1B4Q9UN42 357 aaPredicted RBP14.8□□□□□ -0.04
CHERP-201ENST00000198939 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
CHERP-201ENST00000198939 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
CHERP-201ENST00000198939 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
CHERP-201ENST00000198939 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
CHERP-201ENST00000198939 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
CHERP-201ENST00000198939 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
CHERP-201ENST00000198939 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
CHERP-201ENST00000198939 CDK11AQ9UQ88 783 aaPredicted RBP14.77□□□□□ -0.04
CHERP-201ENST00000198939 ERCC6L2Q5T890 1561 aa14.77□□□□□ -0.05
CHERP-201ENST00000198939 CASKIN1Q8WXD9 1431 aa14.76□□□□□ -0.05
CHERP-201ENST00000198939 UHRF1BP1LA0JNW5 1464 aa14.76□□□□□ -0.05
CHERP-201ENST00000198939 BCANQ96GW7 911 aa14.74□□□□□ -0.05
CHERP-201ENST00000198939 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
CHERP-201ENST00000198939 NEFLP07196 543 aa14.74□□□□□ -0.05
CHERP-201ENST00000198939 HECW1Q76N89 1606 aa14.72□□□□□ -0.05
CHERP-201ENST00000198939 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
CHERP-201ENST00000198939 ABCC2Q92887 1545 aa14.72□□□□□ -0.05
CHERP-201ENST00000198939 CCDC18Q5T9S5 1454 aa14.71□□□□□ -0.05
CHERP-201ENST00000198939 ABCA8O94911 1581 aa14.71□□□□□ -0.05
CHERP-201ENST00000198939 PLB1Q6P1J6 1458 aa14.7□□□□□ -0.06
CHERP-201ENST00000198939 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
CHERP-201ENST00000198939 MAP3K1Q13233 1512 aa14.65□□□□□ -0.06
CHERP-201ENST00000198939 PCF11O94913 1555 aaKnown RBP14.65□□□□□ -0.07
CHERP-201ENST00000198939 NUP153P49790 1475 aaKnown RBP14.64□□□□□ -0.07
CHERP-201ENST00000198939 EPRSP07814 1512 aaKnown RBP14.64□□□□□ -0.07
CHERP-201ENST00000198939 KDM5BQ9UGL1 1544 aa14.64□□□□□ -0.07
CHERP-201ENST00000198939 ATP10BO94823 1461 aa14.62□□□□□ -0.07
CHERP-201ENST00000198939 ARID3CA6NKF2 412 aa14.61□□□□□ -0.07
CHERP-201ENST00000198939 MTUS2Q5JR59 1369 aa14.61□□□□□ -0.07
CHERP-201ENST00000198939 FKBP8Q14318 412 aa14.61□□□□□ -0.07
CHERP-201ENST00000198939 ADCY10Q96PN6 1610 aa14.6□□□□□ -0.07
CHERP-201ENST00000198939 TIAM1Q13009 1591 aa14.56□□□□□ -0.08
CHERP-201ENST00000198939 ZCCHC11Q5TAX3 1644 aaKnown RBP14.55□□□□□ -0.08
CHERP-201ENST00000198939 RBM19Q9Y4C8 960 aaKnown RBP14.55□□□□□ -0.08
CHERP-201ENST00000198939 TROQ12816 1431 aaPredicted RBP14.55□□□□□ -0.08
CHERP-201ENST00000198939 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
CHERP-201ENST00000198939 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
CHERP-201ENST00000198939 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
CHERP-201ENST00000198939 WDR7Q9Y4E6 1490 aa14.54□□□□□ -0.08
CHERP-201ENST00000198939 EHBP1L1Q8N3D4 1523 aa14.53□□□□□ -0.08
CHERP-201ENST00000198939 KCNH8Q96L42 1107 aa14.53□□□□□ -0.08
CHERP-201ENST00000198939 LRRC9Q6ZRR7 1453 aa14.52□□□□□ -0.08
CHERP-201ENST00000198939 CFAP43Q8NDM7 1665 aa14.52□□□□□ -0.09
CHERP-201ENST00000198939 KANK4Q5T7N3 995 aaPredicted RBP14.47□□□□□ -0.09
CHERP-201ENST00000198939 KIF14Q15058 1648 aa14.47□□□□□ -0.09
CHERP-201ENST00000198939 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms