RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 RRBP1Q9P2E9 1410 aaKnown RBP21.14■□□□□ 0.98
TMEM38A-201ENST00000187762 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
TMEM38A-201ENST00000187762 MYT1LQ9UL68 1186 aa21.09■□□□□ 0.97
TMEM38A-201ENST00000187762 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.97
TMEM38A-201ENST00000187762 ITGAEP38570 1179 aa21.08■□□□□ 0.96
TMEM38A-201ENST00000187762 FANCIQ9NVI1 1328 aa21.07■□□□□ 0.96
TMEM38A-201ENST00000187762 ANO8Q9HCE9 1232 aaPredicted RBP21.07■□□□□ 0.96
TMEM38A-201ENST00000187762 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
TMEM38A-201ENST00000187762 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
TMEM38A-201ENST00000187762 NEFLP07196 543 aa21.03■□□□□ 0.96
TMEM38A-201ENST00000187762 DEKP35659 375 aaKnown RBP21.03■□□□□ 0.96
TMEM38A-201ENST00000187762 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
TMEM38A-201ENST00000187762 FANCD2Q9BXW9 1451 aa21.02■□□□□ 0.96
TMEM38A-201ENST00000187762 P3H3Q8IVL6 736 aa20.97■□□□□ 0.95
TMEM38A-201ENST00000187762 RAD54L2Q9Y4B4 1467 aa20.97■□□□□ 0.95
TMEM38A-201ENST00000187762 NESP48681 1621 aa20.93■□□□□ 0.94
TMEM38A-201ENST00000187762 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
TMEM38A-201ENST00000187762 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
TMEM38A-201ENST00000187762 MAP3K1Q13233 1512 aa20.91■□□□□ 0.94
TMEM38A-201ENST00000187762 PCF11O94913 1555 aaKnown RBP20.91■□□□□ 0.94
TMEM38A-201ENST00000187762 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
TMEM38A-201ENST00000187762 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.94
TMEM38A-201ENST00000187762 POLA1P09884 1462 aaPredicted RBP20.89■□□□□ 0.94
TMEM38A-201ENST00000187762 TOPBP1Q92547 1522 aa20.89■□□□□ 0.93
TMEM38A-201ENST00000187762 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
TMEM38A-201ENST00000187762 CFAP43Q8NDM7 1665 aa20.87■□□□□ 0.93
TMEM38A-201ENST00000187762 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
TMEM38A-201ENST00000187762 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
TMEM38A-201ENST00000187762 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
TMEM38A-201ENST00000187762 MAPKBP1O60336 1514 aa20.84■□□□□ 0.93
TMEM38A-201ENST00000187762 SALL2Q9Y467 1007 aaPredicted RBP20.83■□□□□ 0.93
TMEM38A-201ENST00000187762 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.92
TMEM38A-201ENST00000187762 ERICH6BQ5W0A0 696 aa20.82■□□□□ 0.92
TMEM38A-201ENST00000187762 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
TMEM38A-201ENST00000187762 SETD5Q9C0A6 1442 aa20.79■□□□□ 0.92
TMEM38A-201ENST00000187762 CTTNBP2Q8WZ74 1663 aa20.79■□□□□ 0.92
TMEM38A-201ENST00000187762 CUL7Q14999 1698 aa20.77■□□□□ 0.92
TMEM38A-201ENST00000187762 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
TMEM38A-201ENST00000187762 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
TMEM38A-201ENST00000187762 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
TMEM38A-201ENST00000187762 WDR97A6NE52 1622 aa20.72■□□□□ 0.91
TMEM38A-201ENST00000187762 CASKIN1Q8WXD9 1431 aa20.71■□□□□ 0.91
TMEM38A-201ENST00000187762 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
TMEM38A-201ENST00000187762 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
TMEM38A-201ENST00000187762 TDRD9Q8NDG6 1382 aaKnown RBP20.69■□□□□ 0.9
TMEM38A-201ENST00000187762 CCDC136Q96JN2 1154 aa20.68■□□□□ 0.9
TMEM38A-201ENST00000187762 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
TMEM38A-201ENST00000187762 UBE2Q2Q8WVN8 375 aa20.66■□□□□ 0.9
TMEM38A-201ENST00000187762 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.9
TMEM38A-201ENST00000187762 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.9
TMEM38A-201ENST00000187762 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.89
TMEM38A-201ENST00000187762 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
TMEM38A-201ENST00000187762 DDX10Q13206 875 aaKnown RBP20.63■□□□□ 0.89
TMEM38A-201ENST00000187762 LRRIQ1Q96JM4 1722 aa20.62■□□□□ 0.89
TMEM38A-201ENST00000187762 NBR1Q14596 966 aa20.62■□□□□ 0.89
TMEM38A-201ENST00000187762 FMN1Q68DA7 1419 aa20.62■□□□□ 0.89
TMEM38A-201ENST00000187762 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
TMEM38A-201ENST00000187762 CCER2I3L3R5 266 aa20.59■□□□□ 0.89
TMEM38A-201ENST00000187762 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
TMEM38A-201ENST00000187762 SAMD9Q5K651 1589 aa20.58■□□□□ 0.89
TMEM38A-201ENST00000187762 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
TMEM38A-201ENST00000187762 FGD6Q6ZV73 1430 aa20.58■□□□□ 0.88
TMEM38A-201ENST00000187762 MTUS2Q5JR59 1369 aa20.56■□□□□ 0.88
TMEM38A-201ENST00000187762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
TMEM38A-201ENST00000187762 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
TMEM38A-201ENST00000187762 PPP1R15AO75807 674 aaPredicted RBP20.54■□□□□ 0.88
TMEM38A-201ENST00000187762 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
TMEM38A-201ENST00000187762 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
TMEM38A-201ENST00000187762 PTPRKQ15262 1439 aa20.52■□□□□ 0.87
TMEM38A-201ENST00000187762 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
TMEM38A-201ENST00000187762 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
TMEM38A-201ENST00000187762 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
TMEM38A-201ENST00000187762 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
TMEM38A-201ENST00000187762 NCOA2Q15596 1464 aa20.48■□□□□ 0.87
TMEM38A-201ENST00000187762 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
TMEM38A-201ENST00000187762 TARBP1Q13395 1621 aaKnown RBP20.47■□□□□ 0.87
TMEM38A-201ENST00000187762 ANP32CO43423 234 aa20.47■□□□□ 0.87
TMEM38A-201ENST00000187762 RTN4Q9NQC3 1192 aaKnown RBP20.46■□□□□ 0.87
TMEM38A-201ENST00000187762 PTPN23Q9H3S7 1636 aa20.45■□□□□ 0.86
TMEM38A-201ENST00000187762 SUPT6HQ7KZ85 1726 aaKnown RBP20.45■□□□□ 0.86
TMEM38A-201ENST00000187762 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
TMEM38A-201ENST00000187762 PPP4R2Q9NY27 417 aa20.44■□□□□ 0.86
TMEM38A-201ENST00000187762 MYOM3Q5VTT5 1437 aa20.44■□□□□ 0.86
TMEM38A-201ENST00000187762 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
TMEM38A-201ENST00000187762 HFM1A2PYH4 1435 aa20.43■□□□□ 0.86
TMEM38A-201ENST00000187762 TIMELESSQ9UNS1 1208 aa20.42■□□□□ 0.86
TMEM38A-201ENST00000187762 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
TMEM38A-201ENST00000187762 THOC2Q8NI27 1593 aaKnown RBP20.41■□□□□ 0.86
TMEM38A-201ENST00000187762 EHBP1L1Q8N3D4 1523 aa20.41■□□□□ 0.86
TMEM38A-201ENST00000187762 NAIPQ13075 1403 aa20.4■□□□□ 0.86
TMEM38A-201ENST00000187762 UACAQ9BZF9 1416 aa20.39■□□□□ 0.85
TMEM38A-201ENST00000187762 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
TMEM38A-201ENST00000187762 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
TMEM38A-201ENST00000187762 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
TMEM38A-201ENST00000187762 ARID3CA6NKF2 412 aa20.34■□□□□ 0.85
TMEM38A-201ENST00000187762 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.85
TMEM38A-201ENST00000187762 IQGAP2Q13576 1575 aa20.33■□□□□ 0.84
TMEM38A-201ENST00000187762 CHIC2Q9UKJ5 165 aa20.32■□□□□ 0.84
TMEM38A-201ENST00000187762 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
TMEM38A-201ENST00000187762 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms