RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
HDAC7-201ENST00000080059 PLEKHD1A6NEE1 506 aa18.15■□□□□ 0.5
HDAC7-201ENST00000080059 KCNH8Q96L42 1107 aa18.13■□□□□ 0.49
HDAC7-201ENST00000080059 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
HDAC7-201ENST00000080059 CFDP1Q9UEE9 299 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-201ENST00000080059 ERCC6Q03468 1493 aa18.12■□□□□ 0.49
HDAC7-201ENST00000080059 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
HDAC7-201ENST00000080059 HNRNPUQ00839 825 aaKnown RBP eCLIP18.09■□□□□ 0.493e-6■□□□□ 11.1
HDAC7-201ENST00000080059 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
HDAC7-201ENST00000080059 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
HDAC7-201ENST00000080059 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
HDAC7-201ENST00000080059 NPM1P06748 294 aaKnown RBP eCLIP18.05■□□□□ 0.48
HDAC7-201ENST00000080059 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.483e-7■■■■□ 21.1
HDAC7-201ENST00000080059 FKBP8Q14318 412 aa18.03■□□□□ 0.48
HDAC7-201ENST00000080059 CHGAP10645 457 aaKnown RBP18.03■□□□□ 0.48
HDAC7-201ENST00000080059 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
HDAC7-201ENST00000080059 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
HDAC7-201ENST00000080059 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
HDAC7-201ENST00000080059 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
HDAC7-201ENST00000080059 IGF1RP08069 1367 aa17.96■□□□□ 0.47
HDAC7-201ENST00000080059 RAB3GAP2Q9H2M9 1393 aa17.96■□□□□ 0.47
HDAC7-201ENST00000080059 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.46
HDAC7-201ENST00000080059 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
HDAC7-201ENST00000080059 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
HDAC7-201ENST00000080059 ARHGAP35Q9NRY4 1499 aa17.93■□□□□ 0.46
HDAC7-201ENST00000080059 FMN1Q68DA7 1419 aa17.92■□□□□ 0.46
HDAC7-201ENST00000080059 DAXXQ9UER7 740 aaPredicted RBP17.92■□□□□ 0.46
HDAC7-201ENST00000080059 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
HDAC7-201ENST00000080059 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
HDAC7-201ENST00000080059 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
HDAC7-201ENST00000080059 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
HDAC7-201ENST00000080059 FOXD1Q16676 465 aa17.87■□□□□ 0.45
HDAC7-201ENST00000080059 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
HDAC7-201ENST00000080059 MYT1Q01538 1121 aa17.83■□□□□ 0.45
HDAC7-201ENST00000080059 SENP3-EIF4A1A0A087X0R7 540 aa17.83■□□□□ 0.45
HDAC7-201ENST00000080059 CFTRP13569 1480 aa17.82■□□□□ 0.44
HDAC7-201ENST00000080059 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
HDAC7-201ENST00000080059 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
HDAC7-201ENST00000080059 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
HDAC7-201ENST00000080059 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
HDAC7-201ENST00000080059 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
HDAC7-201ENST00000080059 CARD11Q9BXL7 1154 aa17.78■□□□□ 0.44
HDAC7-201ENST00000080059 KIF21BO75037 1637 aa17.78■□□□□ 0.44
HDAC7-201ENST00000080059 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
HDAC7-201ENST00000080059 ESF1Q9H501 851 aaKnown RBP17.76■□□□□ 0.43
HDAC7-201ENST00000080059 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
HDAC7-201ENST00000080059 PPP1R15AO75807 674 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-201ENST00000080059 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
HDAC7-201ENST00000080059 NESP48681 1621 aa17.74■□□□□ 0.43
HDAC7-201ENST00000080059 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
HDAC7-201ENST00000080059 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
HDAC7-201ENST00000080059 PKD2Q13563 968 aa17.72■□□□□ 0.43
HDAC7-201ENST00000080059 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
HDAC7-201ENST00000080059 CANXP27824 592 aaKnown RBP17.71■□□□□ 0.43
HDAC7-201ENST00000080059 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
HDAC7-201ENST00000080059 CUX1P39880 1505 aa17.69■□□□□ 0.42
HDAC7-201ENST00000080059 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
HDAC7-201ENST00000080059 HSPA5P11021 654 aaKnown RBP17.68■□□□□ 0.42
HDAC7-201ENST00000080059 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
HDAC7-201ENST00000080059 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
HDAC7-201ENST00000080059 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
HDAC7-201ENST00000080059 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.425e-7■■■■■ 29
HDAC7-201ENST00000080059 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
HDAC7-201ENST00000080059 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
HDAC7-201ENST00000080059 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
HDAC7-201ENST00000080059 NEFMP07197 916 aa17.63■□□□□ 0.41
HDAC7-201ENST00000080059 CC2D2AQ9P2K1 1620 aa17.63■□□□□ 0.41
HDAC7-201ENST00000080059 BCL11AQ9H165 835 aa17.63■□□□□ 0.41
HDAC7-201ENST00000080059 HNRNPMP52272 730 aaKnown RBP eCLIP17.63■□□□□ 0.412e-6■■■□□ 16.7
HDAC7-201ENST00000080059 WDR43Q15061 677 aaKnown RBP eCLIP17.62■□□□□ 0.413e-9■■■■□ 20.2
HDAC7-201ENST00000080059 CCDC136Q96JN2 1154 aa17.62■□□□□ 0.41
HDAC7-201ENST00000080059 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
HDAC7-201ENST00000080059 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-201ENST00000080059 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
HDAC7-201ENST00000080059 NUP155O75694 1391 aa17.61■□□□□ 0.41
HDAC7-201ENST00000080059 CCDC18Q5T9S5 1454 aa17.59■□□□□ 0.41
HDAC7-201ENST00000080059 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
HDAC7-201ENST00000080059 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
HDAC7-201ENST00000080059 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
HDAC7-201ENST00000080059 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
HDAC7-201ENST00000080059 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
HDAC7-201ENST00000080059 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-201ENST00000080059 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
HDAC7-201ENST00000080059 KNSTRNQ9Y448 316 aa17.53■□□□□ 0.4
HDAC7-201ENST00000080059 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
HDAC7-201ENST00000080059 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
HDAC7-201ENST00000080059 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
HDAC7-201ENST00000080059 FGD6Q6ZV73 1430 aa17.51■□□□□ 0.39
HDAC7-201ENST00000080059 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
HDAC7-201ENST00000080059 ANP32AP39687 249 aaKnown RBP17.5■□□□□ 0.39
HDAC7-201ENST00000080059 GGT6Q6P531 493 aa17.48■□□□□ 0.39
HDAC7-201ENST00000080059 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
HDAC7-201ENST00000080059 CASKIN1Q8WXD9 1431 aa17.47■□□□□ 0.39
HDAC7-201ENST00000080059 PTPRGP23470 1445 aa17.46■□□□□ 0.39
HDAC7-201ENST00000080059 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
HDAC7-201ENST00000080059 RRBP1Q9P2E9 1410 aaKnown RBP17.45■□□□□ 0.38
HDAC7-201ENST00000080059 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-201ENST00000080059 TMF1P82094 1093 aa17.43■□□□□ 0.38
HDAC7-201ENST00000080059 KIF3BO15066 747 aa17.41■□□□□ 0.38
HDAC7-201ENST00000080059 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms