RNA–Protein interactions for RNA: ENSMUST00000215510.1

Usp47-206, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

TSL 5 BASIC

Gene Usp47, Length 4,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-206ENSMUST00000215510 Mrs2Q5NCE8 434 aa14.26□□□□□ -0.13
Usp47-206ENSMUST00000215510 Grwd1Q810D6 446 aaKnown RBP14.25□□□□□ -0.13
Usp47-206ENSMUST00000215510 Sycp2Q9CUU3 1500 aa14.25□□□□□ -0.13
Usp47-206ENSMUST00000215510 Rad21Q61550 635 aaKnown RBP14.24□□□□□ -0.13
Usp47-206ENSMUST00000215510 Aebp2Q9Z248 504 aaKnown RBP14.24□□□□□ -0.13
Usp47-206ENSMUST00000215510 4933416C03RikQ3V063 378 aa14.23□□□□□ -0.13
Usp47-206ENSMUST00000215510 Kdm2aP59997 1161 aa14.23□□□□□ -0.13
Usp47-206ENSMUST00000215510 Cecr2E9Q2Z1 1453 aa14.22□□□□□ -0.13
Usp47-206ENSMUST00000215510 Rrp7aQ9D1C9 280 aaKnown RBP14.22□□□□□ -0.13
Usp47-206ENSMUST00000215510 Arid3cA6PWV5 409 aa14.17□□□□□ -0.14
Usp47-206ENSMUST00000215510 Mroh3A0A1D5RM54 893 aa14.12□□□□□ -0.15
Usp47-206ENSMUST00000215510 ArxO35085 564 aa14.11□□□□□ -0.15
Usp47-206ENSMUST00000215510 CftrP26361 1476 aa14.11□□□□□ -0.15
Usp47-206ENSMUST00000215510 Cux2P70298 1426 aa14.11□□□□□ -0.15
Usp47-206ENSMUST00000215510 ScribQ80U72 1612 aa14.1□□□□□ -0.15
Usp47-206ENSMUST00000215510 Cep162Q6ZQ06 1403 aa14.1□□□□□ -0.15
Usp47-206ENSMUST00000215510 Aebp1Q640N1 1128 aa14.09□□□□□ -0.15
Usp47-206ENSMUST00000215510 Mtus2Q3UHD3 1353 aa14.09□□□□□ -0.15
Usp47-206ENSMUST00000215510 Stk24Q99KH8 431 aa14.08□□□□□ -0.16
Usp47-206ENSMUST00000215510 AknaQ80VW7 1404 aa14.08□□□□□ -0.16
Usp47-206ENSMUST00000215510 Fmn1Q05860 1466 aa14.08□□□□□ -0.16
Usp47-206ENSMUST00000215510 Kif27Q7M6Z4 1394 aa14.07□□□□□ -0.16
Usp47-206ENSMUST00000215510 Hspa5P20029 655 aaKnown RBP14.07□□□□□ -0.16
Usp47-206ENSMUST00000215510 MyclP10166 368 aa14.03□□□□□ -0.16
Usp47-206ENSMUST00000215510 Trim26Q99PN3 545 aa14.03□□□□□ -0.16
Usp47-206ENSMUST00000215510 Gm20521D3Z5F7 333 aa14.03□□□□□ -0.16
Usp47-206ENSMUST00000215510 Anp32aO35381 247 aa14.03□□□□□ -0.16
Usp47-206ENSMUST00000215510 Card11Q8CIS0 1159 aa14.03□□□□□ -0.16
Usp47-206ENSMUST00000215510 Srpk2O54781 681 aaKnown RBP14.02□□□□□ -0.16
Usp47-206ENSMUST00000215510 Anks4bQ8K3X6 423 aa14.02□□□□□ -0.16
Usp47-206ENSMUST00000215510 Rpap1Q80TE0 1409 aa14.02□□□□□ -0.17
Usp47-206ENSMUST00000215510 Ppp1r18Q8BQ30 594 aa14.02□□□□□ -0.17
Usp47-206ENSMUST00000215510 Calr4Q3TQS0 420 aa14□□□□□ -0.17
Usp47-206ENSMUST00000215510 Phldb1Q6PDH0 1371 aaKnown RBP14□□□□□ -0.17
Usp47-206ENSMUST00000215510 Cabp1Q9JLK7 227 aa13.99□□□□□ -0.17
Usp47-206ENSMUST00000215510 Atad2bE9Q166 1460 aaKnown RBP13.98□□□□□ -0.17
Usp47-206ENSMUST00000215510 Ppp4r2Q0VGB7 417 aa13.98□□□□□ -0.17
Usp47-206ENSMUST00000215510 Baz1bQ9Z277 1479 aa13.98□□□□□ -0.17
Usp47-206ENSMUST00000215510 Irx6Q9ER75 438 aa13.97□□□□□ -0.17
Usp47-206ENSMUST00000215510 Map4P27546 1125 aaKnown RBP13.97□□□□□ -0.17
Usp47-206ENSMUST00000215510 IqubQ8CDK3 788 aa13.96□□□□□ -0.17
Usp47-206ENSMUST00000215510 NgefQ8CHT1 710 aa13.96□□□□□ -0.17
Usp47-206ENSMUST00000215510 Crybg2B7ZCC2 1516 aa13.96□□□□□ -0.17
Usp47-206ENSMUST00000215510 Exosc9Q9JHI7 438 aaKnown RBP13.96□□□□□ -0.18
Usp47-206ENSMUST00000215510 Synj1Q8CHC4 1574 aa13.95□□□□□ -0.18
Usp47-206ENSMUST00000215510 Pkd2O35245 966 aa13.94□□□□□ -0.18
Usp47-206ENSMUST00000215510 Cnga1P29974 684 aa13.93□□□□□ -0.18
Usp47-206ENSMUST00000215510 Trak1Q6PD31 939 aa13.93□□□□□ -0.18
Usp47-206ENSMUST00000215510 DaxxO35613 739 aa13.91□□□□□ -0.18
Usp47-206ENSMUST00000215510 Smarca2Q6DIC0 1577 aa13.91□□□□□ -0.18
Usp47-206ENSMUST00000215510 Mia2Q91ZV0 1396 aa13.9□□□□□ -0.18
Usp47-206ENSMUST00000215510 Rapgef2Q8CHG7 1496 aa13.9□□□□□ -0.18
Usp47-206ENSMUST00000215510 Sin3aQ60520 1274 aaKnown RBP13.9□□□□□ -0.19
Usp47-206ENSMUST00000215510 Stag3O70576 1240 aa13.89□□□□□ -0.19
Usp47-206ENSMUST00000215510 Ofd1Q80Z25 1017 aa13.88□□□□□ -0.19
Usp47-206ENSMUST00000215510 LrpprcQ6PB66 1392 aaKnown RBP13.88□□□□□ -0.19
Usp47-206ENSMUST00000215510 Apbb1Q9QXJ1 710 aa13.88□□□□□ -0.19
Usp47-206ENSMUST00000215510 Ecm2Q5FW85 670 aa13.87□□□□□ -0.19
Usp47-206ENSMUST00000215510 Neurod2Q62414 383 aa13.87□□□□□ -0.19
Usp47-206ENSMUST00000215510 Lemd3Q9WU40 921 aa13.87□□□□□ -0.19
Usp47-206ENSMUST00000215510 Wwc2Q6NXJ0 1187 aa13.87□□□□□ -0.19
Usp47-206ENSMUST00000215510 DiexfQ8BTT6 772 aaKnown RBP13.86□□□□□ -0.19
Usp47-206ENSMUST00000215510 Upf2A2AT37 1269 aaKnown RBP13.86□□□□□ -0.19
Usp47-206ENSMUST00000215510 Dhx29Q6PGC1 1365 aaKnown RBP13.85□□□□□ -0.19
Usp47-206ENSMUST00000215510 Cwc22Q8C5N3 908 aaKnown RBP13.84□□□□□ -0.19
Usp47-206ENSMUST00000215510 Stk26Q99JT2 416 aa13.84□□□□□ -0.19
Usp47-206ENSMUST00000215510 Ifit1bl1D3Z6F0 470 aa13.83□□□□□ -0.2
Usp47-206ENSMUST00000215510 Smarca4Q3TKT4 1613 aaKnown RBP13.83□□□□□ -0.2
Usp47-206ENSMUST00000215510 Mphosph9A6H5Y1 991 aa13.82□□□□□ -0.2
Usp47-206ENSMUST00000215510 Wdr43Q6ZQL4 677 aaKnown RBP13.82□□□□□ -0.2
Usp47-206ENSMUST00000215510 Rundc1Q0VDN7 615 aa13.82□□□□□ -0.2
Usp47-206ENSMUST00000215510 Kif3bQ61771 747 aa13.81□□□□□ -0.2
Usp47-206ENSMUST00000215510 Carmil1Q6EDY6 1374 aa13.81□□□□□ -0.2
Usp47-206ENSMUST00000215510 Fyco1Q8VDC1 1437 aa13.81□□□□□ -0.2
Usp47-206ENSMUST00000215510 CntlnA2AM05 1397 aa13.8□□□□□ -0.2
Usp47-206ENSMUST00000215510 Fgd1P52734 960 aa13.8□□□□□ -0.2
Usp47-206ENSMUST00000215510 Sart1Q9Z315 806 aaKnown RBP13.79□□□□□ -0.2
Usp47-206ENSMUST00000215510 Rtl5Q5DTT4 599 aa13.77□□□□□ -0.21
Usp47-206ENSMUST00000215510 1700019A02RikA0A087WPV9 146 aa13.76□□□□□ -0.21
Usp47-206ENSMUST00000215510 Arid4bA2CG63 1314 aaKnown RBP13.74□□□□□ -0.21
Usp47-206ENSMUST00000215510 Ccnb3Q810T2 1396 aa13.73□□□□□ -0.21
Usp47-206ENSMUST00000215510 MlecQ6ZQI3 291 aaKnown RBP13.73□□□□□ -0.21
Usp47-206ENSMUST00000215510 Plin1Q8CGN5 517 aa13.73□□□□□ -0.21
Usp47-206ENSMUST00000215510 WrnO09053 1401 aa13.72□□□□□ -0.21
Usp47-206ENSMUST00000215510 Gm6268A2A3U9 297 aa13.72□□□□□ -0.21
Usp47-206ENSMUST00000215510 Mapk8ip3Q9ESN9 1337 aa13.72□□□□□ -0.21
Usp47-206ENSMUST00000215510 Aplp2Q06335 707 aa13.72□□□□□ -0.21
Usp47-206ENSMUST00000215510 Myt1Q8CFC2 1127 aa13.71□□□□□ -0.21
Usp47-206ENSMUST00000215510 Znf316Q6PGE4 1016 aa13.7□□□□□ -0.22
Usp47-206ENSMUST00000215510 Iqgap2Q3UQ44 1575 aa13.7□□□□□ -0.22
Usp47-206ENSMUST00000215510 Gtf2e1Q9D0D5 440 aa13.7□□□□□ -0.22
Usp47-206ENSMUST00000215510 Trim30dE9PWL0 497 aa13.69□□□□□ -0.22
Usp47-206ENSMUST00000215510 Txndc2Q6P902 515 aa13.69□□□□□ -0.22
Usp47-206ENSMUST00000215510 Arhgap35Q91YM2 1499 aa13.69□□□□□ -0.22
Usp47-206ENSMUST00000215510 Nup155Q99P88 1391 aaKnown RBP13.68□□□□□ -0.22
Usp47-206ENSMUST00000215510 Rtn4Q99P72 1162 aaKnown RBP13.67□□□□□ -0.22
Usp47-206ENSMUST00000215510 Exoc6Q8R313 802 aa13.66□□□□□ -0.22
Usp47-206ENSMUST00000215510 Cttnbp2B9EJA2 1648 aa13.66□□□□□ -0.22
Usp47-206ENSMUST00000215510 Sox12Q04890 314 aa13.66□□□□□ -0.22
Usp47-206ENSMUST00000215510 Pabpn1Q8CCS6 302 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms