RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Cep162Q6ZQ06 1403 aa13.01□□□□□ -0.33
Usp28-203ENSMUST00000213874 Nolc1E9Q5C9 702 aaKnown RBP13.01□□□□□ -0.33
Usp28-203ENSMUST00000213874 Setd5Q5XJV7 1441 aa13□□□□□ -0.33
Usp28-203ENSMUST00000213874 Mrs2Q5NCE8 434 aa12.98□□□□□ -0.33
Usp28-203ENSMUST00000213874 Prdm10Q3UTQ7 1184 aa12.95□□□□□ -0.34
Usp28-203ENSMUST00000213874 Wwc2Q6NXJ0 1187 aa12.94□□□□□ -0.34
Usp28-203ENSMUST00000213874 Sycp2Q9CUU3 1500 aa12.92□□□□□ -0.34
Usp28-203ENSMUST00000213874 CftrP26361 1476 aa12.9□□□□□ -0.34
Usp28-203ENSMUST00000213874 Upf2A2AT37 1269 aaKnown RBP12.9□□□□□ -0.34
Usp28-203ENSMUST00000213874 ArxO35085 564 aa12.9□□□□□ -0.35
Usp28-203ENSMUST00000213874 Irx3P81067 507 aa12.89□□□□□ -0.35
Usp28-203ENSMUST00000213874 Rad21Q61550 635 aaKnown RBP12.86□□□□□ -0.35
Usp28-203ENSMUST00000213874 Fkbp15Q6P9Q6 1216 aaKnown RBP12.86□□□□□ -0.35
Usp28-203ENSMUST00000213874 Supt16hQ920B9 1047 aa12.86□□□□□ -0.35
Usp28-203ENSMUST00000213874 4933416C03RikQ3V063 378 aa12.86□□□□□ -0.35
Usp28-203ENSMUST00000213874 Npm1Q61937 292 aaKnown RBP12.85□□□□□ -0.35
Usp28-203ENSMUST00000213874 Wdr43Q6ZQL4 677 aaKnown RBP12.84□□□□□ -0.35
Usp28-203ENSMUST00000213874 Dnajc5bQ9CQ94 199 aa12.84□□□□□ -0.35
Usp28-203ENSMUST00000213874 Plppr3Q7TPB0 716 aa12.82□□□□□ -0.36
Usp28-203ENSMUST00000213874 Znf710Q3U288 666 aa12.8□□□□□ -0.36
Usp28-203ENSMUST00000213874 Eea1Q8BL66 1411 aa12.8□□□□□ -0.36
Usp28-203ENSMUST00000213874 Taok2Q6ZQ29 1240 aa12.78□□□□□ -0.36
Usp28-203ENSMUST00000213874 Cc2d2aQ8CFW7 1633 aa12.77□□□□□ -0.36
Usp28-203ENSMUST00000213874 Rgl3Q3UYI5 709 aa12.77□□□□□ -0.37
Usp28-203ENSMUST00000213874 Kif15Q6P9L6 1387 aa12.76□□□□□ -0.37
Usp28-203ENSMUST00000213874 Rtn4Q99P72 1162 aaKnown RBP12.76□□□□□ -0.37
Usp28-203ENSMUST00000213874 Ccdc27Q3V036 639 aa12.76□□□□□ -0.37
Usp28-203ENSMUST00000213874 Grwd1Q810D6 446 aaKnown RBP12.76□□□□□ -0.37
Usp28-203ENSMUST00000213874 DaxxO35613 739 aa12.75□□□□□ -0.37
Usp28-203ENSMUST00000213874 Pak3Q61036 559 aa12.75□□□□□ -0.37
Usp28-203ENSMUST00000213874 Rangap1P46061 589 aaKnown RBP12.74□□□□□ -0.37
Usp28-203ENSMUST00000213874 Zfp777B9EKF4 885 aa12.74□□□□□ -0.37
Usp28-203ENSMUST00000213874 Kcnh8P59111 1102 aa12.73□□□□□ -0.37
Usp28-203ENSMUST00000213874 Ecm2Q5FW85 670 aa12.73□□□□□ -0.37
Usp28-203ENSMUST00000213874 Exoc6Q8R313 802 aa12.72□□□□□ -0.37
Usp28-203ENSMUST00000213874 BicraF8VPZ9 1578 aa12.7□□□□□ -0.38
Usp28-203ENSMUST00000213874 Ubl4bQ9CQ84 188 aa12.69□□□□□ -0.38
Usp28-203ENSMUST00000213874 Apbb1Q9QXJ1 710 aa12.69□□□□□ -0.38
Usp28-203ENSMUST00000213874 Ipo4Q8VI75 1082 aa12.69□□□□□ -0.38
Usp28-203ENSMUST00000213874 Hsp90aa1P07901 733 aaKnown RBP12.69□□□□□ -0.38
Usp28-203ENSMUST00000213874 Fmn1Q05860 1466 aa12.68□□□□□ -0.38
Usp28-203ENSMUST00000213874 Dbr1Q923B1 550 aa12.67□□□□□ -0.38
Usp28-203ENSMUST00000213874 Ofd1Q80Z25 1017 aa12.66□□□□□ -0.38
Usp28-203ENSMUST00000213874 PtprkP35822 1457 aa12.66□□□□□ -0.38
Usp28-203ENSMUST00000213874 Rpap1Q80TE0 1409 aa12.66□□□□□ -0.38
Usp28-203ENSMUST00000213874 Ncapd3Q6ZQK0 1506 aa12.65□□□□□ -0.38
Usp28-203ENSMUST00000213874 B4galnt3Q6L8S8 986 aa12.64□□□□□ -0.39
Usp28-203ENSMUST00000213874 Baz1bQ9Z277 1479 aa12.64□□□□□ -0.39
Usp28-203ENSMUST00000213874 Crybg2B7ZCC2 1516 aa12.63□□□□□ -0.39
Usp28-203ENSMUST00000213874 Ccdc9Q8VC31 543 aaKnown RBP12.63□□□□□ -0.39
Usp28-203ENSMUST00000213874 Zfp644E9QA22 1323 aa12.63□□□□□ -0.39
Usp28-203ENSMUST00000213874 Erich6D3Z6S9 713 aa12.63□□□□□ -0.39
Usp28-203ENSMUST00000213874 Gm13697A2AK42 830 aa12.62□□□□□ -0.39
Usp28-203ENSMUST00000213874 NeflP08551 543 aa12.62□□□□□ -0.39
Usp28-203ENSMUST00000213874 Znf692Q3U381 531 aa12.62□□□□□ -0.39
Usp28-203ENSMUST00000213874 Os9Q8K2C7 672 aa12.62□□□□□ -0.39
Usp28-203ENSMUST00000213874 Arap1Q4LDD4 1452 aa12.62□□□□□ -0.39
Usp28-203ENSMUST00000213874 ChgaP26339 463 aaKnown RBP12.6□□□□□ -0.39
Usp28-203ENSMUST00000213874 Polr3glQ8R0C0 218 aa12.59□□□□□ -0.39
Usp28-203ENSMUST00000213874 Gtf3c5Q8R2T8 520 aa12.59□□□□□ -0.39
Usp28-203ENSMUST00000213874 Cabp1Q9JLK7 227 aa12.58□□□□□ -0.4
Usp28-203ENSMUST00000213874 Aebp1Q640N1 1128 aa12.57□□□□□ -0.4
Usp28-203ENSMUST00000213874 AqrQ8CFQ3 1481 aaKnown RBP12.56□□□□□ -0.4
Usp28-203ENSMUST00000213874 Slc4a2P13808 1237 aaKnown RBP12.55□□□□□ -0.4
Usp28-203ENSMUST00000213874 Pkd2O35245 966 aa12.55□□□□□ -0.4
Usp28-203ENSMUST00000213874 AampJ3QN89 436 aa12.54□□□□□ -0.4
Usp28-203ENSMUST00000213874 Pds5bQ4VA53 1446 aaKnown RBP12.54□□□□□ -0.4
Usp28-203ENSMUST00000213874 Mphosph9A6H5Y1 991 aa12.53□□□□□ -0.4
Usp28-203ENSMUST00000213874 Arhgap35Q91YM2 1499 aa12.53□□□□□ -0.4
Usp28-203ENSMUST00000213874 Trim26Q99PN3 545 aa12.52□□□□□ -0.4
Usp28-203ENSMUST00000213874 Ccer2J3QPU5 274 aa12.51□□□□□ -0.41
Usp28-203ENSMUST00000213874 Arhgap27A2AB59 869 aa12.51□□□□□ -0.41
Usp28-203ENSMUST00000213874 Smg6P61406 1418 aaKnown RBP12.51□□□□□ -0.41
Usp28-203ENSMUST00000213874 Top2aQ01320 1528 aaKnown RBP12.51□□□□□ -0.41
Usp28-203ENSMUST00000213874 Spryd3E9Q9B3 442 aa12.5□□□□□ -0.41
Usp28-203ENSMUST00000213874 Neurod2Q62414 383 aa12.5□□□□□ -0.41
Usp28-203ENSMUST00000213874 Armcx1Q9CX83 456 aa12.5□□□□□ -0.41
Usp28-203ENSMUST00000213874 Arid4bA2CG63 1314 aaKnown RBP12.49□□□□□ -0.41
Usp28-203ENSMUST00000213874 Rundc1Q0VDN7 615 aa12.48□□□□□ -0.41
Usp28-203ENSMUST00000213874 Anp32bQ9EST5 272 aaKnown RBP12.47□□□□□ -0.41
Usp28-203ENSMUST00000213874 Card11Q8CIS0 1159 aa12.46□□□□□ -0.41
Usp28-203ENSMUST00000213874 CanxP35564 591 aaKnown RBP12.46□□□□□ -0.42
Usp28-203ENSMUST00000213874 Trak1Q6PD31 939 aa12.46□□□□□ -0.42
Usp28-203ENSMUST00000213874 Cttnbp2B9EJA2 1648 aa12.45□□□□□ -0.42
Usp28-203ENSMUST00000213874 Naip1Q9QWK5 1403 aa12.45□□□□□ -0.42
Usp28-203ENSMUST00000213874 Kdm2aP59997 1161 aa12.45□□□□□ -0.42
Usp28-203ENSMUST00000213874 4930567H17RikQ3V0K5 233 aa12.45□□□□□ -0.42
Usp28-203ENSMUST00000213874 Ccdc18Q640L5 1455 aa12.44□□□□□ -0.42
Usp28-203ENSMUST00000213874 Top2bQ64511 1612 aa12.44□□□□□ -0.42
Usp28-203ENSMUST00000213874 BccipQ9CWI3 316 aa12.44□□□□□ -0.42
Usp28-203ENSMUST00000213874 NgefQ8CHT1 710 aa12.43□□□□□ -0.42
Usp28-203ENSMUST00000213874 Senp3Q9EP97 568 aaKnown RBP12.42□□□□□ -0.42
Usp28-203ENSMUST00000213874 Kcnn1Q9EQR3 537 aa12.41□□□□□ -0.42
Usp28-203ENSMUST00000213874 Smarca4Q3TKT4 1613 aaKnown RBP12.41□□□□□ -0.42
Usp28-203ENSMUST00000213874 Ccnb3Q810T2 1396 aa12.41□□□□□ -0.42
Usp28-203ENSMUST00000213874 Vsig10D3YX43 558 aa12.39□□□□□ -0.43
Usp28-203ENSMUST00000213874 IbspQ61711 324 aa12.38□□□□□ -0.43
Usp28-203ENSMUST00000213874 CrbnQ8C7D2 445 aa12.38□□□□□ -0.43
Usp28-203ENSMUST00000213874 Trim30dE9PWL0 497 aa12.38□□□□□ -0.43
Usp28-203ENSMUST00000213874 Dhx29Q6PGC1 1365 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms