RNA–Protein interactions for RNA: ENSMUST00000208589.1

Smarca2-238, Transcript of Probable global transcription activator SNF2L2, mouse

TSL 5 BASIC

Gene Smarca2, Length 1,054 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Smarca2-238	ENSMUST00000208589	Rsf1	E9PWW9	1441 aa	Known RBP	12.86	□□□□□ -0.35
Smarca2-238	ENSMUST00000208589	Npm3	Q9CPP0	175 aa	Known RBP	12.85	□□□□□ -0.35
Smarca2-238	ENSMUST00000208589	Skida1	Q80YR3	822 aa		12.82	□□□□□ -0.36
Smarca2-238	ENSMUST00000208589	Kif15	Q6P9L6	1387 aa		12.8	□□□□□ -0.36
Smarca2-238	ENSMUST00000208589	Cux2	P70298	1426 aa		12.75	□□□□□ -0.37
Smarca2-238	ENSMUST00000208589	Npm1	Q61937	292 aa	Known RBP	12.75	□□□□□ -0.37
Smarca2-238	ENSMUST00000208589	Mpnd	Q3TV65	487 aa		12.74	□□□□□ -0.37
Smarca2-238	ENSMUST00000208589	Acrbp	Q3V140	540 aa		12.72	□□□□□ -0.37
Smarca2-238	ENSMUST00000208589	Unc13a	Q4KUS2	1712 aa		12.71	□□□□□ -0.38
Smarca2-238	ENSMUST00000208589	Cngb1	E1AZ71	1325 aa		12.7	□□□□□ -0.38
Smarca2-238	ENSMUST00000208589	Pde4c	Q3UEI1	686 aa		12.69	□□□□□ -0.38
Smarca2-238	ENSMUST00000208589	Prm3	Q62100	101 aa		12.68	□□□□□ -0.38
Smarca2-238	ENSMUST00000208589	Golga3	P55937	1487 aa		12.67	□□□□□ -0.38
Smarca2-238	ENSMUST00000208589	Cep164	Q5DU05	1446 aa		12.65	□□□□□ -0.38
Smarca2-238	ENSMUST00000208589	Lamc3	Q9R0B6	1581 aa		12.64	□□□□□ -0.39
Smarca2-238	ENSMUST00000208589	Foxp4	Q9DBY0	795 aa	Known RBP	12.63	□□□□□ -0.39
Smarca2-238	ENSMUST00000208589	Ccdc18	Q640L5	1455 aa		12.62	□□□□□ -0.39
Smarca2-238	ENSMUST00000208589	Il27	Q8K3I6	234 aa		12.58	□□□□□ -0.4
Smarca2-238	ENSMUST00000208589	Styxl1	Q9DAR2	321 aa		12.58	□□□□□ -0.4
Smarca2-238	ENSMUST00000208589	Cadps2	Q8BYR5	1297 aa		12.57	□□□□□ -0.4
Smarca2-238	ENSMUST00000208589	Nyap1	Q6PFX7	833 aa		12.54	□□□□□ -0.4
Smarca2-238	ENSMUST00000208589	Fmn1	Q05860	1466 aa		12.53	□□□□□ -0.4
Smarca2-238	ENSMUST00000208589	Arntl	Q9WTL8	632 aa		12.52	□□□□□ -0.41
Smarca2-238	ENSMUST00000208589	Lrpprc	Q6PB66	1392 aa	Known RBP	12.51	□□□□□ -0.41
Smarca2-238	ENSMUST00000208589	Top2b	Q64511	1612 aa		12.49	□□□□□ -0.41
Smarca2-238	ENSMUST00000208589	Dhx29	Q6PGC1	1365 aa	Known RBP	12.49	□□□□□ -0.41
Smarca2-238	ENSMUST00000208589	Dok7	Q18PE0	504 aa		12.49	□□□□□ -0.41
Smarca2-238	ENSMUST00000208589	Tnn	Q80Z71	1560 aa		12.47	□□□□□ -0.41
Smarca2-238	ENSMUST00000208589	Lrriq1	Q0P5X1	1673 aa		12.45	□□□□□ -0.42
Smarca2-238	ENSMUST00000208589	Kif21a	Q9QXL2	1672 aa		12.45	□□□□□ -0.42
Smarca2-238	ENSMUST00000208589	Camsap1	A2AHC3	1581 aa		12.41	□□□□□ -0.42
Smarca2-238	ENSMUST00000208589	Snph	Q80U23	495 aa		12.41	□□□□□ -0.42
Smarca2-238	ENSMUST00000208589	Pogz	Q8BZH4	1409 aa	Known RBP	12.39	□□□□□ -0.43
Smarca2-238	ENSMUST00000208589	Urb2	E9Q7L1	1524 aa	Known RBP	12.39	□□□□□ -0.43
Smarca2-238	ENSMUST00000208589	Hrc	G5E8J6	738 aa		12.39	□□□□□ -0.43
Smarca2-238	ENSMUST00000208589	Plb1	Q3TTY0	1478 aa		12.38	□□□□□ -0.43
Smarca2-238	ENSMUST00000208589	Ift140	E9PY46	1464 aa		12.35	□□□□□ -0.43
Smarca2-238	ENSMUST00000208589	Crocc2	F6XLV1	1638 aa		12.34	□□□□□ -0.43
Smarca2-238	ENSMUST00000208589	Eif4g3	Q80XI3	1579 aa	Known RBP	12.33	□□□□□ -0.44
Smarca2-238	ENSMUST00000208589	Duox2	A2AQ99	1517 aa		12.32	□□□□□ -0.44
Smarca2-238	ENSMUST00000208589	Efcab5	A0JP43	1406 aa		12.32	□□□□□ -0.44
Smarca2-238	ENSMUST00000208589	Lrrc43	Q3V0L5	667 aa		12.32	□□□□□ -0.44
Smarca2-238	ENSMUST00000208589	Jarid2	Q62315	1234 aa		12.32	□□□□□ -0.44
Smarca2-238	ENSMUST00000208589	Grin2b	Q01097	1482 aa		12.3	□□□□□ -0.44
Smarca2-238	ENSMUST00000208589	Rtn4	Q99P72	1162 aa	Known RBP	12.3	□□□□□ -0.44
Smarca2-238	ENSMUST00000208589	Ccdc88b	Q4QRL3	1481 aa		12.25	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Pabpn1	Q8CCS6	302 aa	Known RBP	12.24	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Shroom2	A2ALU4	1481 aa		12.23	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Nrk	Q9R0G8	1455 aa		12.23	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Rpgrip1	Q9EPQ2	1331 aa		12.23	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Dnajc5	P60904	198 aa		12.23	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Cc2d2b	A0A286YDU8	1405 aa		12.22	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Zeb1	Q64318	1117 aa		12.22	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Top2a	Q01320	1528 aa	Known RBP	12.21	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Tshz2	Q68FE9	1030 aa		12.21	□□□□□ -0.45
Smarca2-238	ENSMUST00000208589	Ppp1r37	Q8BKR5	712 aa		12.2	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Disp1	Q3TDN0	1521 aa		12.19	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Rusc2	Q80U22	1514 aa		12.19	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Gjc2	Q8BQU6	440 aa		12.17	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Pelp1	Q9DBD5	1123 aa	Known RBP	12.17	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Hnrnpul2	Q00PI9	745 aa	Known RBP	12.16	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Nup160	Q9Z0W3	1402 aa	Known RBP	12.15	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Evx2	P49749	475 aa		12.15	□□□□□ -0.46
Smarca2-238	ENSMUST00000208589	Shroom4	Q1W617	1475 aa		12.14	□□□□□ -0.47
Smarca2-238	ENSMUST00000208589	Pbrm1	Q8BSQ9	1634 aa	Known RBP	12.11	□□□□□ -0.47
Smarca2-238	ENSMUST00000208589	Samd9l	Q69Z37	1561 aa		12.1	□□□□□ -0.47
Smarca2-238	ENSMUST00000208589	Rad54l2	Q99NG0	1466 aa		12.1	□□□□□ -0.47
Smarca2-238	ENSMUST00000208589	Grin2a	P35436	1464 aa		12.09	□□□□□ -0.47
Smarca2-238	ENSMUST00000208589	Fgd6	Q69ZL1	1399 aa		12.08	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Tcf3	P15806	651 aa		12.07	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Map3k10	Q66L42	940 aa		12.07	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Aqr	Q8CFQ3	1481 aa	Known RBP	12.07	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Zranb1	Q7M760	708 aa		12.06	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Ptprk	P35822	1457 aa		12.06	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Magi3	Q9EQJ9	1476 aa		12.03	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Sra1	Q80VJ2	232 aa		12.03	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Fxr2	Q9WVR4	673 aa	Known RBP	12.03	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Synm	Q70IV5	1561 aa		12.03	□□□□□ -0.48
Smarca2-238	ENSMUST00000208589	Ehmt2	Q9Z148	1263 aa	Known RBP	12	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Col17a1	Q07563	1470 aa		12	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Cadps	Q80TJ1	1355 aa		11.99	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Mroh2b	Q7M6Y6	1581 aa		11.98	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Pla2r1	Q62028	1487 aa		11.98	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Akna	Q80VW7	1404 aa		11.97	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Carmil1	Q6EDY6	1374 aa		11.97	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Arhgap27	A2AB59	869 aa		11.96	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Znf710	Q3U288	666 aa		11.96	□□□□□ -0.49
Smarca2-238	ENSMUST00000208589	Zcchc11	B2RX14	1644 aa	Known RBP	11.95	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Acin1	Q9JIX8	1338 aa	Known RBP	11.94	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Gpatch8	A2A6A1	1505 aa		11.93	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Map3k1	P53349	1493 aa		11.93	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Rpap1	Q80TE0	1409 aa		11.92	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Eprs	Q8CGC7	1512 aa	Known RBP	11.91	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Clip1	Q922J3	1391 aa		11.91	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Rapgef2	Q8CHG7	1496 aa		11.9	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Soga1	E1U8D0	1418 aa		11.9	□□□□□ -0.5
Smarca2-238	ENSMUST00000208589	Gapvd1	Q6PAR5	1458 aa		11.89	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Myt1l	P97500	1187 aa		11.89	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Ttbk1	Q6PCN3	1308 aa		11.88	□□□□□ -0.51
Smarca2-238	ENSMUST00000208589	Tchh	A0A0B4J1F9	1599 aa		11.88	□□□□□ -0.51

Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms