RNA–Protein interactions for RNA: ENSMUST00000196449.4

Vcam1-203, Transcript of Vascular cell adhesion protein 1, mousemouse

TSL 1 (best) BASIC

Gene Vcam1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1-203ENSMUST00000196449 Shroom4Q1W617 1475 aa10.26□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Zcchc11B2RX14 1644 aaKnown RBP10.25□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Pbrm1Q8BSQ9 1634 aaKnown RBP10.25□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Ncapd3Q6ZQK0 1506 aa10.23□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Eea1Q8BL66 1411 aa10.22□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Arap1Q4LDD4 1452 aa10.22□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Duox2A2AQ99 1517 aa10.22□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Map3k1P53349 1493 aa10.21□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Las1lA2BE28 776 aaKnown RBP10.21□□□□□ -0.77
Vcam1-203ENSMUST00000196449 Grin2bQ01097 1482 aa10.21□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Neurod1Q60867 357 aa10.19□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Setd5Q5XJV7 1441 aa10.19□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Aebp2Q9Z248 504 aaKnown RBP10.18□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Cc2d2bA0A286YDU8 1405 aa10.18□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Disp1Q3TDN0 1521 aa10.18□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Arhgef5E9Q7D5 1581 aa10.18□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Ap3b1Q9Z1T1 1105 aa10.17□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Nup160Q9Z0W3 1402 aaKnown RBP10.17□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Mroh2bQ7M6Y6 1581 aa10.17□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Efcab5A0JP43 1406 aa10.16□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Wdr66E9Q743 1299 aa10.15□□□□□ -0.78
Vcam1-203ENSMUST00000196449 Setd1bQ8CFT2 1985 aa10.14□□□□□ -0.79
Vcam1-203ENSMUST00000196449 TonslQ6NZL6 1363 aa10.14□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Samd9lQ69Z37 1561 aa10.13□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Gpatch8A2A6A1 1505 aa10.12□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Tiam1Q60610 1591 aa10.12□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Ankrd26Q811D2 1581 aa10.11□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Erich3F6QRE9 1637 aa10.11□□□□□ -0.79
Vcam1-203ENSMUST00000196449 AqrQ8CFQ3 1481 aaKnown RBP10.11□□□□□ -0.79
Vcam1-203ENSMUST00000196449 ClspnQ80YR7 1315 aa10.1□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Pelp1Q9DBD5 1123 aaKnown RBP10.1□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Kdm5bQ80Y84 1544 aa10.09□□□□□ -0.79
Vcam1-203ENSMUST00000196449 Naip1Q9QWK5 1403 aa10.09□□□□□ -0.79
Vcam1-203ENSMUST00000196449 BlmO88700 1416 aa10.07□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Grin2aP35436 1464 aa10.07□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Kcna4Q61423 654 aa10.06□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Fgd6Q69ZL1 1399 aa10.06□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Magi3Q9EQJ9 1476 aa10.06□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Pcf11G3X9Z4 1553 aa10.06□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Carmil1Q6EDY6 1374 aa10.05□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Adgrl3Q80TS3 1537 aa10.04□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Slx4Q6P1D7 1565 aa10.04□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Ppargc1bQ8VHJ7 1014 aa10.04□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Lmo7E9PYF4 1699 aaKnown RBP10.04□□□□□ -0.8
Vcam1-203ENSMUST00000196449 TchhA0A0B4J1F9 1599 aa10.04□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Cux1P53564 1515 aa10.04□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Cep170Q6A065 1588 aa10.02□□□□□ -0.8
Vcam1-203ENSMUST00000196449 Rad54l2Q99NG0 1466 aa10.02□□□□□ -0.81
Vcam1-203ENSMUST00000196449 CntlnA2AM05 1397 aa10.01□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Gapvd1Q6PAR5 1458 aa10.01□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Eid3Q3V124 375 aa10□□□□□ -0.81
Vcam1-203ENSMUST00000196449 SynmQ70IV5 1561 aa10□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Anks4bQ8K3X6 423 aa9.99□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Lmod2Q3UHZ5 550 aa9.99□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Pla2r1Q62028 1487 aa9.98□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Nop58Q6DFW4 536 aaKnown RBP9.97□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Abcc1O35379 1528 aa9.97□□□□□ -0.81
Vcam1-203ENSMUST00000196449 CadpsQ80TJ1 1355 aa9.96□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Cdk11bP24788 784 aaKnown RBP9.96□□□□□ -0.81
Vcam1-203ENSMUST00000196449 Peg3Q3URU2 1571 aa9.96□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Fyco1Q8VDC1 1437 aa9.96□□□□□ -0.82
Vcam1-203ENSMUST00000196449 PtprtQ99M80 1454 aa9.96□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Gm156Q58A37 223 aa9.95□□□□□ -0.82
Vcam1-203ENSMUST00000196449 3425401B19RikD3Z1D3 1412 aa9.95□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Chd1P40201 1711 aa9.94□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Aebp1Q640N1 1128 aa9.94□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Fam50aQ9WV03 339 aaKnown RBP9.94□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Dnmt1P13864 1620 aaKnown RBP9.94□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Polr1aO35134 1717 aaKnown RBP9.93□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Gm1043A0A140LJC2 1431 aa9.92□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Rpap1Q80TE0 1409 aa9.92□□□□□ -0.82
Vcam1-203ENSMUST00000196449 AknaQ80VW7 1404 aa9.91□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Map3k4O08648 1597 aa9.91□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Ythdc2B2RR83 1445 aaKnown RBP9.9□□□□□ -0.82
Vcam1-203ENSMUST00000196449 Pprc1Q6NZN1 1644 aa9.9□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Abca16E9PWJ7 1678 aa9.89□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Adamts12Q811B3 1600 aa9.89□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Gm7298A0A0N4SVU1 1476 aa9.89□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Fhad1A6PWD2 1420 aa9.89□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Ttbk1Q6PCN3 1308 aa9.88□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Neo1P97798 1493 aa9.88□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Setbp1Q9Z180 1582 aa9.88□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Abcc2Q8VI47 1543 aa9.88□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Mia2Q91ZV0 1396 aa9.87□□□□□ -0.83
Vcam1-203ENSMUST00000196449 EprsQ8CGC7 1512 aaKnown RBP9.87□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Soga1E1U8D0 1418 aa9.87□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Pcdh10E9PXQ7 1057 aa9.87□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Naip2Q9QUK4 1447 aa9.86□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Ccer2J3QPU5 274 aa9.86□□□□□ -0.83
Vcam1-203ENSMUST00000196449 WizO88286 1684 aaKnown RBP9.86□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Gm14025A2AP89 1413 aa9.85□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Vps8Q0P5W1 1427 aa9.85□□□□□ -0.83
Vcam1-203ENSMUST00000196449 BC005561E9Q5E2 1589 aa9.85□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Arhgef12Q8R4H2 1543 aaKnown RBP9.85□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Csrnp3P59055 597 aa9.84□□□□□ -0.83
Vcam1-203ENSMUST00000196449 AI481877A2ALV5 1481 aa9.84□□□□□ -0.83
Vcam1-203ENSMUST00000196449 Ankrd36D3Z4K0 1415 aa9.84□□□□□ -0.83
Vcam1-203ENSMUST00000196449 A2mQ6GQT1 1474 aa9.83□□□□□ -0.84
Vcam1-203ENSMUST00000196449 Abca5Q8K448 1642 aa9.83□□□□□ -0.84
Vcam1-203ENSMUST00000196449 PxdnQ3UQ28 1475 aa9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms