RNA–Protein interactions for RNA: ENSMUST00000190080.6

Trerf1-205, Transcript of Transcriptional-regulating factor 1, mousemouse

TSL 1 (best) BASIC

Gene Trerf1, Length 7,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1-205ENSMUST00000190080 Kdm2aP59997 1161 aa12.29□□□□□ -0.44
Trerf1-205ENSMUST00000190080 Vsig10D3YX43 558 aa12.27□□□□□ -0.44
Trerf1-205ENSMUST00000190080 Rtn4Q99P72 1162 aaKnown RBP12.26□□□□□ -0.45
Trerf1-205ENSMUST00000190080 Clstn2Q9ER65 966 aa12.25□□□□□ -0.45
Trerf1-205ENSMUST00000190080 Kif15Q6P9L6 1387 aa12.25□□□□□ -0.45
Trerf1-205ENSMUST00000190080 Hsp90aa1P07901 733 aaKnown RBP12.24□□□□□ -0.45
Trerf1-205ENSMUST00000190080 Ercc6F8VPZ5 1481 aa12.24□□□□□ -0.45
Trerf1-205ENSMUST00000190080 Upf2A2AT37 1269 aaKnown RBP12.23□□□□□ -0.45
Trerf1-205ENSMUST00000190080 Grwd1Q810D6 446 aaKnown RBP12.21□□□□□ -0.45
Trerf1-205ENSMUST00000190080 IqubQ8CDK3 788 aa12.21□□□□□ -0.45
Trerf1-205ENSMUST00000190080 Ppp1r18Q8BQ30 594 aa12.21□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Ppp4r2Q0VGB7 417 aa12.2□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Ccer2J3QPU5 274 aa12.2□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Stk24Q99KH8 431 aa12.2□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Dcaf1Q80TR8 1506 aa12.2□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Cep164Q5DU05 1446 aa12.2□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Setd5Q5XJV7 1441 aa12.19□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Sall2Q9QX96 1004 aa12.19□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Clstn1Q9EPL2 979 aa12.18□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Srpk2O54781 681 aaKnown RBP12.18□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Mrs2Q5NCE8 434 aa12.18□□□□□ -0.46
Trerf1-205ENSMUST00000190080 DekQ7TNV0 380 aaKnown RBP12.18□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Exosc9Q9JHI7 438 aaKnown RBP12.17□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Rrp7aQ9D1C9 280 aaKnown RBP12.16□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Znf326O88291 580 aa12.15□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Arid4bA2CG63 1314 aaKnown RBP12.15□□□□□ -0.46
Trerf1-205ENSMUST00000190080 Gm20521D3Z5F7 333 aa12.14□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Aplp2Q06335 707 aa12.14□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Ecm2Q5FW85 670 aa12.13□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Rsf1E9PWW9 1441 aaKnown RBP12.13□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Calr4Q3TQS0 420 aa12.13□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Mroh3A0A1D5RM54 893 aa12.12□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Apbb1Q9QXJ1 710 aa12.12□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Stag3O70576 1240 aa12.11□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Cnga1P29974 684 aa12.11□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Ccdc18Q640L5 1455 aa12.11□□□□□ -0.47
Trerf1-205ENSMUST00000190080 NacadQ5SWP3 1504 aa12.1□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Ggt6Q6PDE7 497 aa12.1□□□□□ -0.47
Trerf1-205ENSMUST00000190080 Neurod2Q62414 383 aa12.09□□□□□ -0.47
Trerf1-205ENSMUST00000190080 1700019A02RikA0A087WPV9 146 aa12.07□□□□□ -0.48
Trerf1-205ENSMUST00000190080 MlecQ6ZQI3 291 aaKnown RBP12.06□□□□□ -0.48
Trerf1-205ENSMUST00000190080 Q8BT18 775 aa12.04□□□□□ -0.48
Trerf1-205ENSMUST00000190080 Gm6268A2A3U9 297 aa12.04□□□□□ -0.48
Trerf1-205ENSMUST00000190080 Card11Q8CIS0 1159 aa12.04□□□□□ -0.48
Trerf1-205ENSMUST00000190080 Arid3cA6PWV5 409 aa12.02□□□□□ -0.48
Trerf1-205ENSMUST00000190080 Armcx1Q9CX83 456 aa12.01□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Mapk8ip3Q9ESN9 1337 aa12.01□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Mtus2Q3UHD3 1353 aa12□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Hsp90ab1P11499 724 aaKnown RBP12□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Plin1Q8CGN5 517 aa12□□□□□ -0.49
Trerf1-205ENSMUST00000190080 AknaQ80VW7 1404 aa11.99□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Trim30dE9PWL0 497 aa11.99□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Ubap1lG3UW59 384 aa11.98□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Stk26Q99JT2 416 aa11.98□□□□□ -0.49
Trerf1-205ENSMUST00000190080 Wdr43Q6ZQL4 677 aaKnown RBP11.96□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Sox12Q04890 314 aa11.95□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Znf316Q6PGE4 1016 aa11.95□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Ofd1Q80Z25 1017 aa11.95□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Golga3P55937 1487 aa11.93□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Eea1Q8BL66 1411 aa11.93□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Baz1aO88379 1555 aa11.93□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Trim44Q9QXA7 346 aa11.92□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Dbr1Q923B1 550 aa11.92□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Psme1P97371 249 aa11.9□□□□□ -0.5
Trerf1-205ENSMUST00000190080 Senp3Q9EP97 568 aaKnown RBP11.89□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Tnnt1O88346 262 aa11.88□□□□□ -0.51
Trerf1-205ENSMUST00000190080 PtmaP26350 111 aa11.88□□□□□ -0.51
Trerf1-205ENSMUST00000190080 CanxP35564 591 aaKnown RBP11.88□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Iqcf3Q9D498 203 aa11.88□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Pes1Q9EQ61 584 aaKnown RBP11.88□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Anks4bQ8K3X6 423 aa11.87□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Rpap1Q80TE0 1409 aa11.87□□□□□ -0.51
Trerf1-205ENSMUST00000190080 U2surpQ6NV83 1029 aaKnown RBP11.87□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Aebp2Q9Z248 504 aaKnown RBP11.86□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Sh3bp5Q9Z131 463 aa11.85□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Txndc2Q6P902 515 aa11.84□□□□□ -0.51
Trerf1-205ENSMUST00000190080 Plcb2A3KGF7 1181 aa11.83□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Kdm5dQ62240 1548 aa11.83□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Hsp90b1P08113 802 aaKnown RBP11.82□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Rtf1A2AQ19 715 aaKnown RBP11.82□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Ifit1bl1D3Z6F0 470 aa11.82□□□□□ -0.52
Trerf1-205ENSMUST00000190080 PnnO35691 725 aaKnown RBP11.82□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Kif27Q7M6Z4 1394 aa11.81□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Map4P27546 1125 aaKnown RBP11.8□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Birc3O08863 600 aa11.8□□□□□ -0.52
Trerf1-205ENSMUST00000190080 B4galnt3Q6L8S8 986 aa11.8□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Ppm1fQ8CGA0 452 aa11.8□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Cwc22Q8C5N3 908 aaKnown RBP11.78□□□□□ -0.52
Trerf1-205ENSMUST00000190080 NudcO35685 332 aaKnown RBP11.78□□□□□ -0.52
Trerf1-205ENSMUST00000190080 Rassf8Q8CJ96 419 aa11.77□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Hspa5P20029 655 aaKnown RBP11.77□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Rundc1Q0VDN7 615 aa11.76□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Lemd3Q9WU40 921 aa11.75□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Gtf2e1Q9D0D5 440 aa11.75□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Spryd3E9Q9B3 442 aa11.74□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Podxl2Q8CAE9 603 aa11.74□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Eif4g2Q62448 906 aaKnown RBP11.72□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Pds5bQ4VA53 1446 aaKnown RBP11.72□□□□□ -0.53
Trerf1-205ENSMUST00000190080 Nol10Q5RJG1 687 aaKnown RBP11.72□□□□□ -0.53
Trerf1-205ENSMUST00000190080 BccipQ9CWI3 316 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms