RNA–Protein interactions for RNA: ENSMUST00000189557.1

Trim43b-202, Transcript of Tripartite motif-containing protein 43B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim43b, Length 1,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43b-202ENSMUST00000189557 Nup160Q9Z0W3 1402 aaKnown RBP11.42□□□□□ -0.58
Trim43b-202ENSMUST00000189557 Ythdc2B2RR83 1445 aaKnown RBP11.4□□□□□ -0.59
Trim43b-202ENSMUST00000189557 TnnQ80Z71 1560 aa11.39□□□□□ -0.59
Trim43b-202ENSMUST00000189557 AknaQ80VW7 1404 aa11.39□□□□□ -0.59
Trim43b-202ENSMUST00000189557 Rad54l2Q99NG0 1466 aa11.37□□□□□ -0.59
Trim43b-202ENSMUST00000189557 Ifnlr1Q8CGK5 535 aa11.34□□□□□ -0.59
Trim43b-202ENSMUST00000189557 Pprc1Q6NZN1 1644 aa11.32□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Rapgef2Q8CHG7 1496 aa11.32□□□□□ -0.6
Trim43b-202ENSMUST00000189557 AqrQ8CFQ3 1481 aaKnown RBP11.32□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Abcc1O35379 1528 aa11.31□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Grin2bQ01097 1482 aa11.31□□□□□ -0.6
Trim43b-202ENSMUST00000189557 CadpsQ80TJ1 1355 aa11.31□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Efcab5A0JP43 1406 aa11.31□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Setd1bQ8CFT2 1985 aa11.29□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Samd9lQ69Z37 1561 aa11.29□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Grin2aP35436 1464 aa11.29□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Soga1E1U8D0 1418 aa11.28□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Arhgap27A2AB59 869 aa11.28□□□□□ -0.6
Trim43b-202ENSMUST00000189557 Magi3Q9EQJ9 1476 aa11.24□□□□□ -0.61
Trim43b-202ENSMUST00000189557 Pbrm1Q8BSQ9 1634 aaKnown RBP11.24□□□□□ -0.61
Trim43b-202ENSMUST00000189557 Fmn1Q05860 1466 aa11.23□□□□□ -0.61
Trim43b-202ENSMUST00000189557 Setbp1Q9Z180 1582 aa11.21□□□□□ -0.61
Trim43b-202ENSMUST00000189557 Acin1Q9JIX8 1338 aaKnown RBP11.2□□□□□ -0.62
Trim43b-202ENSMUST00000189557 Top2aQ01320 1528 aaKnown RBP11.19□□□□□ -0.62
Trim43b-202ENSMUST00000189557 Arid3cA6PWV5 409 aa11.18□□□□□ -0.62
Trim43b-202ENSMUST00000189557 Zeb1Q64318 1117 aa11.17□□□□□ -0.62
Trim43b-202ENSMUST00000189557 Fkbp15Q6P9Q6 1216 aaKnown RBP11.17□□□□□ -0.62
Trim43b-202ENSMUST00000189557 Neo1P97798 1493 aa11.17□□□□□ -0.62
Trim43b-202ENSMUST00000189557 Gm14025A2AP89 1413 aa11.16□□□□□ -0.62
Trim43b-202ENSMUST00000189557 Cyb5rlB1AS42 316 aa11.16□□□□□ -0.62
Trim43b-202ENSMUST00000189557 HrcG5E8J6 738 aa11.14□□□□□ -0.63
Trim43b-202ENSMUST00000189557 AI481877A2ALV5 1481 aa11.14□□□□□ -0.63
Trim43b-202ENSMUST00000189557 MlecQ6ZQI3 291 aaKnown RBP11.14□□□□□ -0.63
Trim43b-202ENSMUST00000189557 Pla2r1Q62028 1487 aa11.14□□□□□ -0.63
Trim43b-202ENSMUST00000189557 Chd1P40201 1711 aa11.12□□□□□ -0.63
Trim43b-202ENSMUST00000189557 Jph4Q80WT0 628 aa11.11□□□□□ -0.63
Trim43b-202ENSMUST00000189557 Dnajc5gQ8C632 165 aa11.11□□□□□ -0.63
Trim43b-202ENSMUST00000189557 Ccdc88bQ4QRL3 1481 aa11.11□□□□□ -0.63
Trim43b-202ENSMUST00000189557 Ak9G3UYQ4 1894 aa11.09□□□□□ -0.63
Trim43b-202ENSMUST00000189557 Dnmt1P13864 1620 aaKnown RBP11.08□□□□□ -0.64
Trim43b-202ENSMUST00000189557 EprsQ8CGC7 1512 aaKnown RBP11.08□□□□□ -0.64
Trim43b-202ENSMUST00000189557 NrkQ9R0G8 1455 aa11.06□□□□□ -0.64
Trim43b-202ENSMUST00000189557 PxdnQ3UQ28 1475 aa11.05□□□□□ -0.64
Trim43b-202ENSMUST00000189557 Abcc2Q8VI47 1543 aa11.05□□□□□ -0.64
Trim43b-202ENSMUST00000189557 Clasp1Q80TV8 1535 aaKnown RBP11.03□□□□□ -0.64
Trim43b-202ENSMUST00000189557 Alpk3Q924C5 1678 aa11.03□□□□□ -0.64
Trim43b-202ENSMUST00000189557 SynmQ70IV5 1561 aa11.03□□□□□ -0.64
Trim43b-202ENSMUST00000189557 BC005561E9Q5E2 1589 aa11.01□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Igf1rQ60751 1373 aa11.01□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Depdc5P61460 1591 aa11.01□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Map3k4O08648 1597 aa11□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Mapkbp1Q6NS57 1503 aa11□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Arhgef11Q68FM7 1552 aa10.99□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Shroom4Q1W617 1475 aa10.99□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Ttc37F8VPK0 1563 aa10.98□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Rpap1Q80TE0 1409 aa10.98□□□□□ -0.65
Trim43b-202ENSMUST00000189557 AdgbG3UZ78 1657 aa10.98□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Arhgef12Q8R4H2 1543 aaKnown RBP10.98□□□□□ -0.65
Trim43b-202ENSMUST00000189557 WizO88286 1684 aaKnown RBP10.97□□□□□ -0.65
Trim43b-202ENSMUST00000189557 AcrbpQ3V140 540 aa10.97□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Fndc1E9Q043 1732 aa10.96□□□□□ -0.65
Trim43b-202ENSMUST00000189557 TchhA0A0B4J1F9 1599 aa10.96□□□□□ -0.65
Trim43b-202ENSMUST00000189557 Zfyve16Q80U44 1528 aa10.96□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Slx4Q6P1D7 1565 aa10.95□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Abca16E9PWJ7 1678 aa10.95□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Gpatch8A2A6A1 1505 aa10.94□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Fbxo41Q6NS60 873 aa10.93□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Znf608Q56A10 1511 aa10.93□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Npm2Q80W85 207 aa10.93□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Lrrc9Q8CDN9 1456 aa10.92□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Pde4cQ3UEI1 686 aa10.91□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Ercc6l2Q9JIM3 1537 aa10.9□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Adamts12Q811B3 1600 aa10.9□□□□□ -0.66
Trim43b-202ENSMUST00000189557 Eif4g1Q6NZJ6 1600 aaKnown RBP10.89□□□□□ -0.67
Trim43b-202ENSMUST00000189557 WrnO09053 1401 aa10.88□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Gm7298A0A0N4SVU1 1476 aa10.88□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Nlrp6Q91WS2 869 aa10.86□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Mroh2bQ7M6Y6 1581 aa10.85□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Prdm10Q3UTQ7 1184 aa10.85□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Cypt1Q8CH20 168 aa10.85□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Rtn4Q99P72 1162 aaKnown RBP10.85□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Wdr7Q920I9 1489 aa10.85□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Hecw2Q6I6G8 1578 aa10.84□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Kdm5bQ80Y84 1544 aa10.84□□□□□ -0.67
Trim43b-202ENSMUST00000189557 Brwd3A2AHJ4 1799 aa10.83□□□□□ -0.68
Trim43b-202ENSMUST00000189557 Trap1aP19473 224 aa10.83□□□□□ -0.68
Trim43b-202ENSMUST00000189557 MyclP10166 368 aa10.81□□□□□ -0.68
Trim43b-202ENSMUST00000189557 Carmil1Q6EDY6 1374 aa10.81□□□□□ -0.68
Trim43b-202ENSMUST00000189557 Atp10dQ8K2X1 1416 aa10.8□□□□□ -0.68
Trim43b-202ENSMUST00000189557 Kdm6bQ5NCY0 1641 aa10.79□□□□□ -0.68
Trim43b-202ENSMUST00000189557 Naip2Q9QUK4 1447 aa10.78□□□□□ -0.68
Trim43b-202ENSMUST00000189557 Pcgf6Q99NA9 353 aa10.78□□□□□ -0.68
Trim43b-202ENSMUST00000189557 AglF8VPN4 1532 aa10.77□□□□□ -0.69
Trim43b-202ENSMUST00000189557 Arhgap31A6X8Z5 1425 aa10.77□□□□□ -0.69
Trim43b-202ENSMUST00000189557 Ecm2Q5FW85 670 aa10.74□□□□□ -0.69
Trim43b-202ENSMUST00000189557 Abca5Q8K448 1642 aa10.74□□□□□ -0.69
Trim43b-202ENSMUST00000189557 Rnf17Q99MV7 1640 aa10.74□□□□□ -0.69
Trim43b-202ENSMUST00000189557 Map3k1P53349 1493 aa10.73□□□□□ -0.69
Trim43b-202ENSMUST00000189557 A2mQ6GQT1 1474 aa10.73□□□□□ -0.69
Trim43b-202ENSMUST00000189557 Rrbp1Q99PL5 1605 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms