RNA–Protein interactions for RNA: ENSMUST00000188530.1

Gm28820-201, mousemouse

TSL 5 BASIC

Gene Gm28820, Length 1,498 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28820-201ENSMUST00000188530 Lhx8O35652 367 aa12.36□□□□□ -0.43
Gm28820-201ENSMUST00000188530 Pde4dQ01063 747 aa12.36□□□□□ -0.43
Gm28820-201ENSMUST00000188530 MycnP03966 462 aaKnown RBP12.34□□□□□ -0.43
Gm28820-201ENSMUST00000188530 Repin1Q5U4E2 545 aa12.34□□□□□ -0.43
Gm28820-201ENSMUST00000188530 Atad2Q8CDM1 1040 aa12.31□□□□□ -0.44
Gm28820-201ENSMUST00000188530 Rnf225Q9D7D1 332 aa12.29□□□□□ -0.44
Gm28820-201ENSMUST00000188530 Hdac5Q9Z2V6 1113 aa12.29□□□□□ -0.44
Gm28820-201ENSMUST00000188530 Krtap4-1Q3UUY3 169 aa12.27□□□□□ -0.44
Gm28820-201ENSMUST00000188530 Pdap1Q3UHX2 181 aaKnown RBP12.27□□□□□ -0.45
Gm28820-201ENSMUST00000188530 Znf516Q7TSH3 1157 aa12.27□□□□□ -0.45
Gm28820-201ENSMUST00000188530 Gm45233A0A0N4SVE0 221 aa12.26□□□□□ -0.45
Gm28820-201ENSMUST00000188530 Fam117bQ3U3E2 584 aa12.26□□□□□ -0.45
Gm28820-201ENSMUST00000188530 Ube2uB1AUC4 352 aa12.22□□□□□ -0.45
Gm28820-201ENSMUST00000188530 Dcbld2Q91ZV3 769 aa12.22□□□□□ -0.45
Gm28820-201ENSMUST00000188530 ZxdbA2CE44 873 aa12.21□□□□□ -0.46
Gm28820-201ENSMUST00000188530 Gm13697A2AK42 830 aa12.15□□□□□ -0.46
Gm28820-201ENSMUST00000188530 Ndufv2Q9D6J6 248 aa12.15□□□□□ -0.46
Gm28820-201ENSMUST00000188530 Arhgef1Q61210 920 aaKnown RBP12.1□□□□□ -0.47
Gm28820-201ENSMUST00000188530 Znf579Q80VM4 562 aa12.1□□□□□ -0.47
Gm28820-201ENSMUST00000188530 Prim1P20664 417 aa12.06□□□□□ -0.48
Gm28820-201ENSMUST00000188530 Kank4Q6P9J5 1016 aa12.04□□□□□ -0.48
Gm28820-201ENSMUST00000188530 Tulp1Q9Z273 543 aa12.03□□□□□ -0.48
Gm28820-201ENSMUST00000188530 Bclaf1Q8K019 919 aaKnown RBP12.02□□□□□ -0.48
Gm28820-201ENSMUST00000188530 Chrm1P12657 460 aa11.99□□□□□ -0.49
Gm28820-201ENSMUST00000188530 ScribQ80U72 1612 aa11.96□□□□□ -0.49
Gm28820-201ENSMUST00000188530 St18Q80TY4 1045 aa11.95□□□□□ -0.5
Gm28820-201ENSMUST00000188530 Pak3Q61036 559 aa11.94□□□□□ -0.5
Gm28820-201ENSMUST00000188530 Jph4Q80WT0 628 aa11.94□□□□□ -0.5
Gm28820-201ENSMUST00000188530 C1qbpO35658 278 aa11.93□□□□□ -0.5
Gm28820-201ENSMUST00000188530 Fam181bQ80VF6 417 aa11.93□□□□□ -0.5
Gm28820-201ENSMUST00000188530 Spock2Q9ER58 423 aa11.9□□□□□ -0.5
Gm28820-201ENSMUST00000188530 Pcdhb17Q91VD8 799 aa11.86□□□□□ -0.51
Gm28820-201ENSMUST00000188530 Ecm2Q5FW85 670 aa11.79□□□□□ -0.52
Gm28820-201ENSMUST00000188530 Hmx1O70218 332 aa11.78□□□□□ -0.52
Gm28820-201ENSMUST00000188530 Ppp6r1Q7TSI3 856 aa11.77□□□□□ -0.52
Gm28820-201ENSMUST00000188530 Ferd3lQ923Z4 168 aa11.77□□□□□ -0.52
Gm28820-201ENSMUST00000188530 Pelp1Q9DBD5 1123 aaKnown RBP11.77□□□□□ -0.52
Gm28820-201ENSMUST00000188530 Rhox8Q6VSS7 320 aa11.76□□□□□ -0.53
Gm28820-201ENSMUST00000188530 Axin1O35625 863 aa11.75□□□□□ -0.53
Gm28820-201ENSMUST00000188530 Scarf1Q5ND28 820 aa11.73□□□□□ -0.53
Gm28820-201ENSMUST00000188530 EdaraddQ8VHX2 208 aa11.73□□□□□ -0.53
Gm28820-201ENSMUST00000188530 Dkk1O54908 272 aa11.72□□□□□ -0.53
Gm28820-201ENSMUST00000188530 Evi5P97366 809 aa11.72□□□□□ -0.53
Gm28820-201ENSMUST00000188530 Fndc3aQ8BX90 1198 aa11.72□□□□□ -0.53
Gm28820-201ENSMUST00000188530 E9Q0B3 247 aa11.7□□□□□ -0.54
Gm28820-201ENSMUST00000188530 Msh5Q9QUM7 833 aa11.67□□□□□ -0.54
Gm28820-201ENSMUST00000188530 Lce6aD3YV94 81 aa11.66□□□□□ -0.54
Gm28820-201ENSMUST00000188530 Actn4P57780 912 aaKnown RBP11.66□□□□□ -0.54
Gm28820-201ENSMUST00000188530 TimelessQ9R1X4 1197 aa11.65□□□□□ -0.54
Gm28820-201ENSMUST00000188530 Pcdh10E9PXQ7 1057 aa11.63□□□□□ -0.55
Gm28820-201ENSMUST00000188530 Scnn1bQ9WU38 638 aa11.63□□□□□ -0.55
Gm28820-201ENSMUST00000188530 NacadQ5SWP3 1504 aa11.62□□□□□ -0.55
Gm28820-201ENSMUST00000188530 Irx5Q9JKQ4 484 aa11.62□□□□□ -0.55
Gm28820-201ENSMUST00000188530 Kdm5dQ62240 1548 aa11.61□□□□□ -0.55
Gm28820-201ENSMUST00000188530 Ier5lQ99J55 406 aa11.6□□□□□ -0.55
Gm28820-201ENSMUST00000188530 PsdQ5DTT2 1024 aa11.59□□□□□ -0.55
Gm28820-201ENSMUST00000188530 Dcaf1Q80TR8 1506 aa11.54□□□□□ -0.56
Gm28820-201ENSMUST00000188530 Fkbp4P30416 458 aa11.53□□□□□ -0.56
Gm28820-201ENSMUST00000188530 Pdzrn4E9PUZ9 1014 aa11.52□□□□□ -0.56
Gm28820-201ENSMUST00000188530 Adnp2Q8CHC8 1165 aaKnown RBP11.52□□□□□ -0.56
Gm28820-201ENSMUST00000188530 Zbtb22Q9Z0G7 638 aa11.52□□□□□ -0.56
Gm28820-201ENSMUST00000188530 Rtl1Q7M732 1744 aa11.49□□□□□ -0.57
Gm28820-201ENSMUST00000188530 Ankrd65F6YK91 380 aa11.48□□□□□ -0.57
Gm28820-201ENSMUST00000188530 ElnP54320 860 aa11.48□□□□□ -0.57
Gm28820-201ENSMUST00000188530 Gga1Q8R0H9 635 aa11.45□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Stk3Q9JI10 497 aa11.45□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Gm11563B1AQ90 168 aa11.43□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Krtap4-7Q9D732 168 aa11.43□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Tox2A2A472 547 aa11.41□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Apba1B2RUJ5 842 aa11.41□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Slc4a2P13808 1237 aaKnown RBP11.41□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Cypt1Q8CH20 168 aa11.41□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Nap1l5Q9JJF0 156 aa11.41□□□□□ -0.58
Gm28820-201ENSMUST00000188530 Otop3Q80UF9 577 aa11.38□□□□□ -0.59
Gm28820-201ENSMUST00000188530 Sall2Q9QX96 1004 aa11.38□□□□□ -0.59
Gm28820-201ENSMUST00000188530 Sycp2Q9CUU3 1500 aa11.38□□□□□ -0.59
Gm28820-201ENSMUST00000188530 Thap8E9Q695 213 aa11.37□□□□□ -0.59
Gm28820-201ENSMUST00000188530 Dnm1lQ8K1M6 742 aa11.37□□□□□ -0.59
Gm28820-201ENSMUST00000188530 Gm11555B1AQ89 175 aa11.33□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Rgl2Q61193 778 aa11.33□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Rsph6aQ8CDR2 708 aa11.32□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Rb1cc1Q9ESK9 1588 aa11.32□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Smpd1Q04519 627 aa11.31□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Stk24Q99KH8 431 aa11.3□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Mnx1Q9QZW9 404 aa11.3□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Ccdc180J3QNE4 1664 aa11.28□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Hoxa2P31245 372 aa11.27□□□□□ -0.6
Gm28820-201ENSMUST00000188530 Sptlc1O35704 473 aa11.26□□□□□ -0.61
Gm28820-201ENSMUST00000188530 Mier1Q5UAK0 511 aa11.26□□□□□ -0.61
Gm28820-201ENSMUST00000188530 RragcQ99K70 398 aa11.25□□□□□ -0.61
Gm28820-201ENSMUST00000188530 Stk25Q9Z2W1 426 aa11.25□□□□□ -0.61
Gm28820-201ENSMUST00000188530 Neurod1Q60867 357 aa11.24□□□□□ -0.61
Gm28820-201ENSMUST00000188530 Kdm2aP59997 1161 aa11.23□□□□□ -0.61
Gm28820-201ENSMUST00000188530 Onecut3Q8K557 490 aa11.23□□□□□ -0.61
Gm28820-201ENSMUST00000188530 UncxO08934 530 aa11.22□□□□□ -0.61
Gm28820-201ENSMUST00000188530 Setdb2Q8C267 713 aa11.2□□□□□ -0.62
Gm28820-201ENSMUST00000188530 Rnf166Q3U9F6 237 aa11.19□□□□□ -0.62
Gm28820-201ENSMUST00000188530 BicraF8VPZ9 1578 aa11.19□□□□□ -0.62
Gm28820-201ENSMUST00000188530 Prdm10Q3UTQ7 1184 aa11.19□□□□□ -0.62
Gm28820-201ENSMUST00000188530 Baz1aO88379 1555 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms