RNA–Protein interactions for RNA: ENSMUST00000187506.1

Gm28971-201, mousemouse

TSL 5 BASIC

Gene Gm28971, Length 1,498 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28971-201ENSMUST00000187506 Pdap1Q3UHX2 181 aaKnown RBP13.91□□□□□ -0.18
Gm28971-201ENSMUST00000187506 Atad2Q8CDM1 1040 aa13.91□□□□□ -0.18
Gm28971-201ENSMUST00000187506 Fam117bQ3U3E2 584 aa13.87□□□□□ -0.19
Gm28971-201ENSMUST00000187506 Gm13697A2AK42 830 aa13.83□□□□□ -0.2
Gm28971-201ENSMUST00000187506 Dmrta2A2A9A2 531 aa13.82□□□□□ -0.2
Gm28971-201ENSMUST00000187506 Gm45233A0A0N4SVE0 221 aa13.76□□□□□ -0.21
Gm28971-201ENSMUST00000187506 Arhgef1Q61210 920 aaKnown RBP13.71□□□□□ -0.21
Gm28971-201ENSMUST00000187506 Znf516Q7TSH3 1157 aa13.71□□□□□ -0.21
Gm28971-201ENSMUST00000187506 ZxdbA2CE44 873 aa13.68□□□□□ -0.22
Gm28971-201ENSMUST00000187506 Znf579Q80VM4 562 aa13.66□□□□□ -0.22
Gm28971-201ENSMUST00000187506 Rnf225Q9D7D1 332 aa13.65□□□□□ -0.22
Gm28971-201ENSMUST00000187506 Chrm1P12657 460 aa13.64□□□□□ -0.23
Gm28971-201ENSMUST00000187506 Ndufv2Q9D6J6 248 aa13.64□□□□□ -0.23
Gm28971-201ENSMUST00000187506 Spock2Q9ER58 423 aa13.63□□□□□ -0.23
Gm28971-201ENSMUST00000187506 Lhx8O35652 367 aa13.62□□□□□ -0.23
Gm28971-201ENSMUST00000187506 Ecm2Q5FW85 670 aa13.61□□□□□ -0.23
Gm28971-201ENSMUST00000187506 Tulp1Q9Z273 543 aa13.61□□□□□ -0.23
Gm28971-201ENSMUST00000187506 Bclaf1Q8K019 919 aaKnown RBP13.56□□□□□ -0.24
Gm28971-201ENSMUST00000187506 Dcbld2Q91ZV3 769 aa13.56□□□□□ -0.24
Gm28971-201ENSMUST00000187506 Prim1P20664 417 aa13.53□□□□□ -0.24
Gm28971-201ENSMUST00000187506 Kank4Q6P9J5 1016 aa13.51□□□□□ -0.25
Gm28971-201ENSMUST00000187506 C1qbpO35658 278 aa13.48□□□□□ -0.25
Gm28971-201ENSMUST00000187506 Pak3Q61036 559 aa13.48□□□□□ -0.25
Gm28971-201ENSMUST00000187506 Jph4Q80WT0 628 aa13.43□□□□□ -0.26
Gm28971-201ENSMUST00000187506 Ferd3lQ923Z4 168 aa13.43□□□□□ -0.26
Gm28971-201ENSMUST00000187506 Krtap4-1Q3UUY3 169 aa13.42□□□□□ -0.26
Gm28971-201ENSMUST00000187506 Ppp6r1Q7TSI3 856 aa13.39□□□□□ -0.27
Gm28971-201ENSMUST00000187506 Pcdhb17Q91VD8 799 aa13.39□□□□□ -0.27
Gm28971-201ENSMUST00000187506 Fam181bQ80VF6 417 aa13.37□□□□□ -0.27
Gm28971-201ENSMUST00000187506 St18Q80TY4 1045 aa13.28□□□□□ -0.28
Gm28971-201ENSMUST00000187506 TimelessQ9R1X4 1197 aa13.27□□□□□ -0.29
Gm28971-201ENSMUST00000187506 Evi5P97366 809 aa13.24□□□□□ -0.29
Gm28971-201ENSMUST00000187506 Fndc3aQ8BX90 1198 aa13.24□□□□□ -0.29
Gm28971-201ENSMUST00000187506 Actn4P57780 912 aaKnown RBP13.16□□□□□ -0.3
Gm28971-201ENSMUST00000187506 E9Q0B3 247 aa13.16□□□□□ -0.3
Gm28971-201ENSMUST00000187506 Dkk1O54908 272 aa13.14□□□□□ -0.31
Gm28971-201ENSMUST00000187506 Zbtb22Q9Z0G7 638 aa13.14□□□□□ -0.31
Gm28971-201ENSMUST00000187506 Msh5Q9QUM7 833 aa13.13□□□□□ -0.31
Gm28971-201ENSMUST00000187506 Scnn1bQ9WU38 638 aa13.13□□□□□ -0.31
Gm28971-201ENSMUST00000187506 Axin1O35625 863 aa13.12□□□□□ -0.31
Gm28971-201ENSMUST00000187506 Hmx1O70218 332 aa13.09□□□□□ -0.31
Gm28971-201ENSMUST00000187506 EdaraddQ8VHX2 208 aa13.09□□□□□ -0.31
Gm28971-201ENSMUST00000187506 Gm35339A0A140LHH9 1649 aa13.08□□□□□ -0.32
Gm28971-201ENSMUST00000187506 PsdQ5DTT2 1024 aa13.06□□□□□ -0.32
Gm28971-201ENSMUST00000187506 Scarf1Q5ND28 820 aa13.06□□□□□ -0.32
Gm28971-201ENSMUST00000187506 Fkbp4P30416 458 aa13.04□□□□□ -0.32
Gm28971-201ENSMUST00000187506 Ier5lQ99J55 406 aa13.04□□□□□ -0.32
Gm28971-201ENSMUST00000187506 Stk3Q9JI10 497 aa13.04□□□□□ -0.32
Gm28971-201ENSMUST00000187506 Slc4a2P13808 1237 aaKnown RBP13.02□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Rsph6aQ8CDR2 708 aa13.02□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Cypt1Q8CH20 168 aa13.01□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Pelp1Q9DBD5 1123 aaKnown RBP13.01□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Pdzrn4E9PUZ9 1014 aa13□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Nap1l5Q9JJF0 156 aa13□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Irx5Q9JKQ4 484 aa12.99□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Ankrd65F6YK91 380 aa12.97□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Prdm10Q3UTQ7 1184 aa12.97□□□□□ -0.33
Gm28971-201ENSMUST00000187506 NischQ80TM9 1593 aa12.97□□□□□ -0.33
Gm28971-201ENSMUST00000187506 Tox2A2A472 547 aa12.92□□□□□ -0.34
Gm28971-201ENSMUST00000187506 Pcdh10E9PXQ7 1057 aa12.92□□□□□ -0.34
Gm28971-201ENSMUST00000187506 Rgl2Q61193 778 aa12.92□□□□□ -0.34
Gm28971-201ENSMUST00000187506 Lce6aD3YV94 81 aa12.91□□□□□ -0.34
Gm28971-201ENSMUST00000187506 Adnp2Q8CHC8 1165 aaKnown RBP12.89□□□□□ -0.35
Gm28971-201ENSMUST00000187506 Apba1B2RUJ5 842 aa12.88□□□□□ -0.35
Gm28971-201ENSMUST00000187506 Stk24Q99KH8 431 aa12.88□□□□□ -0.35
Gm28971-201ENSMUST00000187506 Otop3Q80UF9 577 aa12.86□□□□□ -0.35
Gm28971-201ENSMUST00000187506 Stk25Q9Z2W1 426 aa12.85□□□□□ -0.35
Gm28971-201ENSMUST00000187506 Mier1Q5UAK0 511 aa12.85□□□□□ -0.35
Gm28971-201ENSMUST00000187506 Gga1Q8R0H9 635 aa12.85□□□□□ -0.35
Gm28971-201ENSMUST00000187506 Dnm1lQ8K1M6 742 aa12.82□□□□□ -0.36
Gm28971-201ENSMUST00000187506 UncxO08934 530 aa12.81□□□□□ -0.36
Gm28971-201ENSMUST00000187506 ElnP54320 860 aa12.78□□□□□ -0.36
Gm28971-201ENSMUST00000187506 Slc24a1Q91WD8 1130 aa12.78□□□□□ -0.36
Gm28971-201ENSMUST00000187506 Kdm2aP59997 1161 aa12.74□□□□□ -0.37
Gm28971-201ENSMUST00000187506 Sall2Q9QX96 1004 aa12.74□□□□□ -0.37
Gm28971-201ENSMUST00000187506 Mnx1Q9QZW9 404 aa12.74□□□□□ -0.37
Gm28971-201ENSMUST00000187506 Neurod1Q60867 357 aa12.72□□□□□ -0.37
Gm28971-201ENSMUST00000187506 Sptlc1O35704 473 aa12.72□□□□□ -0.37
Gm28971-201ENSMUST00000187506 Erich4Q3UNU4 136 aa12.71□□□□□ -0.38
Gm28971-201ENSMUST00000187506 Onecut3Q8K557 490 aa12.71□□□□□ -0.38
Gm28971-201ENSMUST00000187506 Sgip1Q8VD37 806 aa12.7□□□□□ -0.38
Gm28971-201ENSMUST00000187506 Thap8E9Q695 213 aa12.66□□□□□ -0.38
Gm28971-201ENSMUST00000187506 Hoxa2P31245 372 aa12.65□□□□□ -0.38
Gm28971-201ENSMUST00000187506 CatipB9EKE5 520 aa12.64□□□□□ -0.39
Gm28971-201ENSMUST00000187506 Smpd1Q04519 627 aa12.6□□□□□ -0.39
Gm28971-201ENSMUST00000187506 Abcc9P70170 1546 aa12.57□□□□□ -0.4
Gm28971-201ENSMUST00000187506 GcgrQ61606 485 aa12.56□□□□□ -0.4
Gm28971-201ENSMUST00000187506 Noa1Q9JJG9 693 aaKnown RBP12.56□□□□□ -0.4
Gm28971-201ENSMUST00000187506 Lrrc14bQ3UJB3 510 aa12.55□□□□□ -0.4
Gm28971-201ENSMUST00000187506 1700006A11RikB9EHI3 544 aa12.54□□□□□ -0.4
Gm28971-201ENSMUST00000187506 Dnajc5P60904 198 aa12.53□□□□□ -0.4
Gm28971-201ENSMUST00000187506 Setdb2Q8C267 713 aa12.53□□□□□ -0.4
Gm28971-201ENSMUST00000187506 RragcQ99K70 398 aa12.53□□□□□ -0.4
Gm28971-201ENSMUST00000187506 Gm11563B1AQ90 168 aa12.51□□□□□ -0.41
Gm28971-201ENSMUST00000187506 Krtap4-7Q9D732 168 aa12.51□□□□□ -0.41
Gm28971-201ENSMUST00000187506 Abcc8B2RUS7 1588 aa12.5□□□□□ -0.41
Gm28971-201ENSMUST00000187506 Pcdhb20Q91XZ9 799 aa12.49□□□□□ -0.41
Gm28971-201ENSMUST00000187506 Fmr1nbQ80ZA7 238 aa12.47□□□□□ -0.41
Gm28971-201ENSMUST00000187506 Inpp5dQ9ES52 1191 aa12.46□□□□□ -0.41
Gm28971-201ENSMUST00000187506 Pbx2O35984 430 aa12.46□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms