RNA–Protein interactions for RNA: ENSMUST00000184458.7

Trps1-206, Transcript of Zinc finger transcription factor Trps1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trps1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1-206ENSMUST00000184458 Cep164Q5DU05 1446 aa10.69□□□□□ -0.7
Trps1-206ENSMUST00000184458 Brd4Q9ESU6 1400 aaKnown RBP10.69□□□□□ -0.7
Trps1-206ENSMUST00000184458 PtmaP26350 111 aa10.68□□□□□ -0.7
Trps1-206ENSMUST00000184458 Gm35339A0A140LHH9 1649 aa10.67□□□□□ -0.7
Trps1-206ENSMUST00000184458 Rangap1P46061 589 aaKnown RBP10.66□□□□□ -0.7
Trps1-206ENSMUST00000184458 Adam1bQ8R534 806 aa10.66□□□□□ -0.7
Trps1-206ENSMUST00000184458 Vsig10D3YX43 558 aa10.65□□□□□ -0.7
Trps1-206ENSMUST00000184458 Trim30dE9PWL0 497 aa10.65□□□□□ -0.7
Trps1-206ENSMUST00000184458 Fkbp15Q6P9Q6 1216 aaKnown RBP10.64□□□□□ -0.71
Trps1-206ENSMUST00000184458 Ccdc27Q3V036 639 aa10.63□□□□□ -0.71
Trps1-206ENSMUST00000184458 Chmp4bQ9D8B3 224 aaKnown RBP10.63□□□□□ -0.71
Trps1-206ENSMUST00000184458 Ppm1gQ61074 542 aa10.62□□□□□ -0.71
Trps1-206ENSMUST00000184458 Znf326O88291 580 aa10.61□□□□□ -0.71
Trps1-206ENSMUST00000184458 Plcb2A3KGF7 1181 aa10.58□□□□□ -0.72
Trps1-206ENSMUST00000184458 PnnO35691 725 aaKnown RBP10.57□□□□□ -0.72
Trps1-206ENSMUST00000184458 Zfp777B9EKF4 885 aa10.57□□□□□ -0.72
Trps1-206ENSMUST00000184458 Ofd1Q80Z25 1017 aa10.57□□□□□ -0.72
Trps1-206ENSMUST00000184458 Chic2Q9D9G3 165 aa10.57□□□□□ -0.72
Trps1-206ENSMUST00000184458 Map7O88735 730 aa10.56□□□□□ -0.72
Trps1-206ENSMUST00000184458 BlmO88700 1416 aa10.56□□□□□ -0.72
Trps1-206ENSMUST00000184458 Casc1Q6TDU8 730 aa10.54□□□□□ -0.72
Trps1-206ENSMUST00000184458 Trim26Q99PN3 545 aa10.53□□□□□ -0.72
Trps1-206ENSMUST00000184458 IqubQ8CDK3 788 aa10.53□□□□□ -0.72
Trps1-206ENSMUST00000184458 Cwc22Q8C5N3 908 aaKnown RBP10.52□□□□□ -0.73
Trps1-206ENSMUST00000184458 Safb2Q80YR5 991 aaKnown RBP10.52□□□□□ -0.73
Trps1-206ENSMUST00000184458 Mbd3Q9Z2D8 285 aaKnown RBP10.5□□□□□ -0.73
Trps1-206ENSMUST00000184458 Fam71e1A1L3C1 212 aa10.49□□□□□ -0.73
Trps1-206ENSMUST00000184458 Mapk8ip3Q9ESN9 1337 aa10.49□□□□□ -0.73
Trps1-206ENSMUST00000184458 PtmsQ9D0J8 101 aaKnown RBP10.49□□□□□ -0.73
Trps1-206ENSMUST00000184458 NudcO35685 332 aaKnown RBP10.49□□□□□ -0.73
Trps1-206ENSMUST00000184458 Calcoco2A2A6M5 331 aa10.49□□□□□ -0.73
Trps1-206ENSMUST00000184458 Gm973E9Q295 1059 aa10.49□□□□□ -0.73
Trps1-206ENSMUST00000184458 Irx3P81067 507 aa10.48□□□□□ -0.73
Trps1-206ENSMUST00000184458 Rgl3Q3UYI5 709 aa10.47□□□□□ -0.73
Trps1-206ENSMUST00000184458 Iqcf3Q9D498 203 aa10.47□□□□□ -0.73
Trps1-206ENSMUST00000184458 AU015836B2RUM3 263 aa10.47□□□□□ -0.73
Trps1-206ENSMUST00000184458 Tnnt2P50752 301 aa10.47□□□□□ -0.73
Trps1-206ENSMUST00000184458 Pes1Q9EQ61 584 aaKnown RBP10.47□□□□□ -0.73
Trps1-206ENSMUST00000184458 KnstrnQ9D9Z1 312 aaKnown RBP10.46□□□□□ -0.74
Trps1-206ENSMUST00000184458 Arid4bA2CG63 1314 aaKnown RBP10.45□□□□□ -0.74
Trps1-206ENSMUST00000184458 Setd5Q5XJV7 1441 aa10.45□□□□□ -0.74
Trps1-206ENSMUST00000184458 MccE9PWI3 1003 aa10.45□□□□□ -0.74
Trps1-206ENSMUST00000184458 1700123L14RikQ3V2K7 440 aa10.45□□□□□ -0.74
Trps1-206ENSMUST00000184458 Plppr3Q7TPB0 716 aa10.44□□□□□ -0.74
Trps1-206ENSMUST00000184458 Ubl4bQ9CQ84 188 aa10.44□□□□□ -0.74
Trps1-206ENSMUST00000184458 P3h3Q8CG70 732 aa10.44□□□□□ -0.74
Trps1-206ENSMUST00000184458 Srpk2O54781 681 aaKnown RBP10.44□□□□□ -0.74
Trps1-206ENSMUST00000184458 Wwc2Q6NXJ0 1187 aa10.43□□□□□ -0.74
Trps1-206ENSMUST00000184458 Card11Q8CIS0 1159 aa10.42□□□□□ -0.74
Trps1-206ENSMUST00000184458 Exosc9Q9JHI7 438 aaKnown RBP10.42□□□□□ -0.74
Trps1-206ENSMUST00000184458 Gm6268A2A3U9 297 aa10.42□□□□□ -0.74
Trps1-206ENSMUST00000184458 HnrnpuQ8VEK3 800 aaKnown RBP10.41□□□□□ -0.74
Trps1-206ENSMUST00000184458 Hsp90b1P08113 802 aaKnown RBP10.4□□□□□ -0.75
Trps1-206ENSMUST00000184458 Pde3bQ61409 1100 aa10.4□□□□□ -0.75
Trps1-206ENSMUST00000184458 Mroh3A0A1D5RM54 893 aa10.39□□□□□ -0.75
Trps1-206ENSMUST00000184458 Irx6Q9ER75 438 aa10.39□□□□□ -0.75
Trps1-206ENSMUST00000184458 MsnP26041 577 aaKnown RBP10.39□□□□□ -0.75
Trps1-206ENSMUST00000184458 Gm20521D3Z5F7 333 aa10.38□□□□□ -0.75
Trps1-206ENSMUST00000184458 Mak16Q8BGS0 296 aaKnown RBP10.38□□□□□ -0.75
Trps1-206ENSMUST00000184458 Apbb1Q9QXJ1 710 aa10.38□□□□□ -0.75
Trps1-206ENSMUST00000184458 Neurod2Q62414 383 aa10.37□□□□□ -0.75
Trps1-206ENSMUST00000184458 Kdm2aP59997 1161 aa10.36□□□□□ -0.75
Trps1-206ENSMUST00000184458 Eif4g2Q62448 906 aaKnown RBP10.36□□□□□ -0.75
Trps1-206ENSMUST00000184458 Tcerg1Q8CGF7 1100 aaKnown RBP10.36□□□□□ -0.75
Trps1-206ENSMUST00000184458 Rwdd1Q9CQK7 243 aa10.35□□□□□ -0.75
Trps1-206ENSMUST00000184458 Dnttip2Q8R2M2 758 aaKnown RBP10.35□□□□□ -0.75
Trps1-206ENSMUST00000184458 Erich6bQ9D4S6 220 aa10.35□□□□□ -0.75
Trps1-206ENSMUST00000184458 Grwd1Q810D6 446 aaKnown RBP10.34□□□□□ -0.75
Trps1-206ENSMUST00000184458 Znf316Q6PGE4 1016 aa10.33□□□□□ -0.76
Trps1-206ENSMUST00000184458 SetQ9EQU5 289 aaKnown RBP10.33□□□□□ -0.76
Trps1-206ENSMUST00000184458 Mia2Q91ZV0 1396 aa10.33□□□□□ -0.76
Trps1-206ENSMUST00000184458 Bcl11aQ9QYE3 773 aa10.33□□□□□ -0.76
Trps1-206ENSMUST00000184458 Sh3bp5Q9Z131 463 aa10.32□□□□□ -0.76
Trps1-206ENSMUST00000184458 Sart3Q9JLI8 962 aaKnown RBP10.32□□□□□ -0.76
Trps1-206ENSMUST00000184458 Eea1Q8BL66 1411 aa10.32□□□□□ -0.76
Trps1-206ENSMUST00000184458 Dbr1Q923B1 550 aa10.32□□□□□ -0.76
Trps1-206ENSMUST00000184458 Aebp2Q9Z248 504 aaKnown RBP10.31□□□□□ -0.76
Trps1-206ENSMUST00000184458 Abcc8B2RUS7 1588 aa10.31□□□□□ -0.76
Trps1-206ENSMUST00000184458 Dnai2A2AC93 623 aa10.31□□□□□ -0.76
Trps1-206ENSMUST00000184458 Dnai1Q8C0M8 701 aa10.31□□□□□ -0.76
Trps1-206ENSMUST00000184458 Anapc15P60007 132 aa10.3□□□□□ -0.76
Trps1-206ENSMUST00000184458 RdxP26043 583 aaKnown RBP10.3□□□□□ -0.76
Trps1-206ENSMUST00000184458 Rrp12Q6P5B0 1295 aaKnown RBP10.3□□□□□ -0.76
Trps1-206ENSMUST00000184458 Spryd3E9Q9B3 442 aa10.3□□□□□ -0.76
Trps1-206ENSMUST00000184458 Mtus2Q3UHD3 1353 aa10.29□□□□□ -0.76
Trps1-206ENSMUST00000184458 Tpm3-rs7D3Z2H9 248 aa10.29□□□□□ -0.76
Trps1-206ENSMUST00000184458 Stag3O70576 1240 aa10.29□□□□□ -0.76
Trps1-206ENSMUST00000184458 B4galnt3Q6L8S8 986 aa10.29□□□□□ -0.76
Trps1-206ENSMUST00000184458 R3hcc1Q8BSI6 488 aa10.29□□□□□ -0.76
Trps1-206ENSMUST00000184458 Cald1E9QA15 768 aaKnown RBP10.28□□□□□ -0.76
Trps1-206ENSMUST00000184458 4933402E13RikQ9D4D2 429 aa10.28□□□□□ -0.76
Trps1-206ENSMUST00000184458 EspnQ9ET47 871 aa10.28□□□□□ -0.76
Trps1-206ENSMUST00000184458 Chmp5Q9D7S9 219 aa10.28□□□□□ -0.76
Trps1-206ENSMUST00000184458 Rtn4Q99P72 1162 aaKnown RBP10.27□□□□□ -0.76
Trps1-206ENSMUST00000184458 Armcx1Q9CX83 456 aa10.27□□□□□ -0.77
Trps1-206ENSMUST00000184458 Clstn1Q9EPL2 979 aa10.27□□□□□ -0.77
Trps1-206ENSMUST00000184458 Map7d2A2AG50 781 aa10.26□□□□□ -0.77
Trps1-206ENSMUST00000184458 Pcmtd1P59913 357 aa10.26□□□□□ -0.77
Trps1-206ENSMUST00000184458 Ddrgk1Q80WW9 315 aa10.26□□□□□ -0.77
Trps1-206ENSMUST00000184458 Rassf8Q8CJ96 419 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms