RNA–Protein interactions for RNA: ENSMUST00000176698.8

Smarca2-213, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-213ENSMUST00000176698 Ccdc180J3QNE4 1664 aa13.33□□□□□ -0.28
Smarca2-213ENSMUST00000176698 Os9Q8K2C7 672 aa13.31□□□□□ -0.28
Smarca2-213ENSMUST00000176698 MycnP03966 462 aaKnown RBP13.3□□□□□ -0.28
Smarca2-213ENSMUST00000176698 Ferd3lQ923Z4 168 aa13.3□□□□□ -0.28
Smarca2-213ENSMUST00000176698 Zbtb12Q9Z150 459 aa13.29□□□□□ -0.28
Smarca2-213ENSMUST00000176698 Ildr2B5TVM2 661 aa13.28□□□□□ -0.28
Smarca2-213ENSMUST00000176698 Crybg2B7ZCC2 1516 aa13.27□□□□□ -0.29
Smarca2-213ENSMUST00000176698 Baz1aO88379 1555 aa13.27□□□□□ -0.29
Smarca2-213ENSMUST00000176698 Zbtb7aO88939 569 aaKnown RBP13.26□□□□□ -0.29
Smarca2-213ENSMUST00000176698 Noa1Q9JJG9 693 aaKnown RBP13.26□□□□□ -0.29
Smarca2-213ENSMUST00000176698 TimelessQ9R1X4 1197 aa13.22□□□□□ -0.29
Smarca2-213ENSMUST00000176698 DiexfQ8BTT6 772 aaKnown RBP13.21□□□□□ -0.29
Smarca2-213ENSMUST00000176698 Rnf216P58283 853 aa13.2□□□□□ -0.3
Smarca2-213ENSMUST00000176698 Rsph6aQ8CDR2 708 aa13.18□□□□□ -0.3
Smarca2-213ENSMUST00000176698 VaspP70460 375 aaKnown RBP13.16□□□□□ -0.3
Smarca2-213ENSMUST00000176698 Cnksr2Q80YA9 1032 aa13.16□□□□□ -0.3
Smarca2-213ENSMUST00000176698 Pelp1Q9DBD5 1123 aaKnown RBP13.15□□□□□ -0.3
Smarca2-213ENSMUST00000176698 Rgl2Q61193 778 aa13.11□□□□□ -0.31
Smarca2-213ENSMUST00000176698 Prr29B1ARI9 187 aa13.09□□□□□ -0.31
Smarca2-213ENSMUST00000176698 Kcnn1Q9EQR3 537 aa13.07□□□□□ -0.32
Smarca2-213ENSMUST00000176698 Lrrc43Q3V0L5 667 aa13.06□□□□□ -0.32
Smarca2-213ENSMUST00000176698 Map4k4P97820 1233 aaKnown RBP13.05□□□□□ -0.32
Smarca2-213ENSMUST00000176698 UncxO08934 530 aa13.03□□□□□ -0.32
Smarca2-213ENSMUST00000176698 Kdm2aP59997 1161 aa13.03□□□□□ -0.32
Smarca2-213ENSMUST00000176698 ChgaP26339 463 aaKnown RBP13.02□□□□□ -0.33
Smarca2-213ENSMUST00000176698 Abcb7Q61102 752 aaKnown RBP13.01□□□□□ -0.33
Smarca2-213ENSMUST00000176698 Gtpbp6Q3U6U5 514 aa12.98□□□□□ -0.33
Smarca2-213ENSMUST00000176698 Scaf1Q5U4C3 1256 aaKnown RBP12.98□□□□□ -0.33
Smarca2-213ENSMUST00000176698 Hdac5Q9Z2V6 1113 aa12.98□□□□□ -0.33
Smarca2-213ENSMUST00000176698 Zcchc6Q5BLK4 1491 aaKnown RBP12.97□□□□□ -0.33
Smarca2-213ENSMUST00000176698 Fam117bQ3U3E2 584 aa12.93□□□□□ -0.34
Smarca2-213ENSMUST00000176698 Ggt6Q6PDE7 497 aa12.93□□□□□ -0.34
Smarca2-213ENSMUST00000176698 Smarca2Q6DIC0 1577 aa12.92□□□□□ -0.34
Smarca2-213ENSMUST00000176698 Zc3h15Q3TIV5 426 aaKnown RBP12.9□□□□□ -0.34
Smarca2-213ENSMUST00000176698 Jarid2Q62315 1234 aa12.87□□□□□ -0.35
Smarca2-213ENSMUST00000176698 Ric3Q8BPM6 367 aa12.86□□□□□ -0.35
Smarca2-213ENSMUST00000176698 Pds5bQ4VA53 1446 aaKnown RBP12.86□□□□□ -0.35
Smarca2-213ENSMUST00000176698 Rad21Q61550 635 aaKnown RBP12.84□□□□□ -0.35
Smarca2-213ENSMUST00000176698 Npm1Q61937 292 aaKnown RBP12.84□□□□□ -0.35
Smarca2-213ENSMUST00000176698 Cecr2E9Q2Z1 1453 aa12.84□□□□□ -0.35
Smarca2-213ENSMUST00000176698 Slc7a3P70423 618 aa12.83□□□□□ -0.36
Smarca2-213ENSMUST00000176698 Stk25Q9Z2W1 426 aa12.83□□□□□ -0.36
Smarca2-213ENSMUST00000176698 Arhgef1Q61210 920 aaKnown RBP12.82□□□□□ -0.36
Smarca2-213ENSMUST00000176698 Repin1Q5U4E2 545 aa12.81□□□□□ -0.36
Smarca2-213ENSMUST00000176698 Atad2bE9Q166 1460 aaKnown RBP12.8□□□□□ -0.36
Smarca2-213ENSMUST00000176698 Dhx30Q99PU8 1217 aaKnown RBP12.8□□□□□ -0.36
Smarca2-213ENSMUST00000176698 TprnA2AI08 749 aaKnown RBP12.79□□□□□ -0.36
Smarca2-213ENSMUST00000176698 Pde4dQ01063 747 aa12.78□□□□□ -0.36
Smarca2-213ENSMUST00000176698 Nkx1-1G3UXB3 402 aa12.75□□□□□ -0.37
Smarca2-213ENSMUST00000176698 Smarca4Q3TKT4 1613 aaKnown RBP12.75□□□□□ -0.37
Smarca2-213ENSMUST00000176698 Ak7Q9D2H2 614 aa12.75□□□□□ -0.37
Smarca2-213ENSMUST00000176698 Stk3Q9JI10 497 aa12.75□□□□□ -0.37
Smarca2-213ENSMUST00000176698 Gm13697A2AK42 830 aa12.71□□□□□ -0.37
Smarca2-213ENSMUST00000176698 Thoc2B1AZI6 1594 aaKnown RBP12.71□□□□□ -0.37
Smarca2-213ENSMUST00000176698 Hnrnpul2Q00PI9 745 aaKnown RBP12.7□□□□□ -0.38
Smarca2-213ENSMUST00000176698 Chrm1P12657 460 aa12.69□□□□□ -0.38
Smarca2-213ENSMUST00000176698 Stk24Q99KH8 431 aa12.68□□□□□ -0.38
Smarca2-213ENSMUST00000176698 Brpf1B2RRD7 1212 aa12.66□□□□□ -0.38
Smarca2-213ENSMUST00000176698 Slc24a3Q99PD7 645 aa12.66□□□□□ -0.38
Smarca2-213ENSMUST00000176698 Ccdc96Q9CR92 584 aa12.66□□□□□ -0.38
Smarca2-213ENSMUST00000176698 Iqgap2Q3UQ44 1575 aa12.65□□□□□ -0.38
Smarca2-213ENSMUST00000176698 Sra1Q80VJ2 232 aa12.63□□□□□ -0.39
Smarca2-213ENSMUST00000176698 Pip4p2Q9CZX7 257 aa12.63□□□□□ -0.39
Smarca2-213ENSMUST00000176698 Clcn6O35454 870 aa12.61□□□□□ -0.39
Smarca2-213ENSMUST00000176698 Apba2P98084 750 aa12.61□□□□□ -0.39
Smarca2-213ENSMUST00000176698 Sgip1Q8VD37 806 aa12.58□□□□□ -0.4
Smarca2-213ENSMUST00000176698 Ccdc136Q3TVA9 1136 aa12.56□□□□□ -0.4
Smarca2-213ENSMUST00000176698 CftrP26361 1476 aa12.55□□□□□ -0.4
Smarca2-213ENSMUST00000176698 Frmpd1A2AKB4 1549 aa12.54□□□□□ -0.4
Smarca2-213ENSMUST00000176698 Mier1Q5UAK0 511 aa12.54□□□□□ -0.4
Smarca2-213ENSMUST00000176698 Wdr62Q3U3T8 1523 aa12.53□□□□□ -0.4
Smarca2-213ENSMUST00000176698 Synj1Q8CHC4 1574 aa12.53□□□□□ -0.4
Smarca2-213ENSMUST00000176698 Fam117aQ7TNF9 451 aa12.52□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Brd4Q9ESU6 1400 aaKnown RBP12.52□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Ercc6F8VPZ5 1481 aa12.52□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Pdap1Q3UHX2 181 aaKnown RBP12.51□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Q8BT18 775 aa12.51□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Kank3Q9Z1P7 791 aa12.51□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Bcl2l13P59017 434 aa12.5□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Zbtb7bQ64321 544 aa12.5□□□□□ -0.41
Smarca2-213ENSMUST00000176698 PrimpolQ6P1E7 537 aa12.5□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Cttnbp2B9EJA2 1648 aa12.48□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Cc2d2aQ8CFW7 1633 aa12.48□□□□□ -0.41
Smarca2-213ENSMUST00000176698 Cypt1Q8CH20 168 aa12.45□□□□□ -0.42
Smarca2-213ENSMUST00000176698 Fam135aQ6NS59 1506 aa12.45□□□□□ -0.42
Smarca2-213ENSMUST00000176698 HrcG5E8J6 738 aa12.44□□□□□ -0.42
Smarca2-213ENSMUST00000176698 Atad2Q8CDM1 1040 aa12.42□□□□□ -0.42
Smarca2-213ENSMUST00000176698 Phldb1Q6PDH0 1371 aaKnown RBP12.4□□□□□ -0.42
Smarca2-213ENSMUST00000176698 Unc13aQ4KUS2 1712 aa12.4□□□□□ -0.43
Smarca2-213ENSMUST00000176698 NclP09405 707 aaKnown RBP12.39□□□□□ -0.43
Smarca2-213ENSMUST00000176698 Gpr37l1Q99JG2 481 aa12.37□□□□□ -0.43
Smarca2-213ENSMUST00000176698 E2f4Q8R0K9 410 aa12.35□□□□□ -0.43
Smarca2-213ENSMUST00000176698 Pitpnm1O35954 1243 aa12.34□□□□□ -0.43
Smarca2-213ENSMUST00000176698 Irx6Q9ER75 438 aa12.34□□□□□ -0.43
Smarca2-213ENSMUST00000176698 Ciz1Q8VEH2 845 aa12.33□□□□□ -0.44
Smarca2-213ENSMUST00000176698 Rtl5Q5DTT4 599 aa12.32□□□□□ -0.44
Smarca2-213ENSMUST00000176698 GopcQ8BH60 463 aa12.32□□□□□ -0.44
Smarca2-213ENSMUST00000176698 Nap1l5Q9JJF0 156 aa12.31□□□□□ -0.44
Smarca2-213ENSMUST00000176698 Baz1bQ9Z277 1479 aa12.3□□□□□ -0.44
Smarca2-213ENSMUST00000176698 Erich4Q3UNU4 136 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms