RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Grin2aP35436 1464 aa14.42□□□□□ -0.1
Trim40-203ENSMUST00000172711 AqrQ8CFQ3 1481 aaKnown RBP14.41□□□□□ -0.1
Trim40-203ENSMUST00000172711 Pprc1Q6NZN1 1644 aa14.41□□□□□ -0.1
Trim40-203ENSMUST00000172711 Fgd6Q69ZL1 1399 aa14.4□□□□□ -0.1
Trim40-203ENSMUST00000172711 Efcab5A0JP43 1406 aa14.36□□□□□ -0.11
Trim40-203ENSMUST00000172711 Abcc1O35379 1528 aa14.35□□□□□ -0.11
Trim40-203ENSMUST00000172711 Chd1P40201 1711 aa14.35□□□□□ -0.11
Trim40-203ENSMUST00000172711 AknaQ80VW7 1404 aa14.33□□□□□ -0.11
Trim40-203ENSMUST00000172711 Rapgef2Q8CHG7 1496 aa14.32□□□□□ -0.12
Trim40-203ENSMUST00000172711 Ythdc2B2RR83 1445 aaKnown RBP14.31□□□□□ -0.12
Trim40-203ENSMUST00000172711 Pla2r1Q62028 1487 aa14.31□□□□□ -0.12
Trim40-203ENSMUST00000172711 Gpatch8A2A6A1 1505 aa14.28□□□□□ -0.12
Trim40-203ENSMUST00000172711 Ppargc1bQ8VHJ7 1014 aa14.25□□□□□ -0.13
Trim40-203ENSMUST00000172711 Dnmt1P13864 1620 aaKnown RBP14.25□□□□□ -0.13
Trim40-203ENSMUST00000172711 Setbp1Q9Z180 1582 aa14.25□□□□□ -0.13
Trim40-203ENSMUST00000172711 Top2aQ01320 1528 aaKnown RBP14.25□□□□□ -0.13
Trim40-203ENSMUST00000172711 BC005561E9Q5E2 1589 aa14.23□□□□□ -0.13
Trim40-203ENSMUST00000172711 SynmQ70IV5 1561 aa14.22□□□□□ -0.13
Trim40-203ENSMUST00000172711 Ccdc88bQ4QRL3 1481 aa14.22□□□□□ -0.13
Trim40-203ENSMUST00000172711 NrkQ9R0G8 1455 aa14.22□□□□□ -0.13
Trim40-203ENSMUST00000172711 Abcc2Q8VI47 1543 aa14.21□□□□□ -0.13
Trim40-203ENSMUST00000172711 Abca16E9PWJ7 1678 aa14.2□□□□□ -0.14
Trim40-203ENSMUST00000172711 CadpsQ80TJ1 1355 aa14.2□□□□□ -0.14
Trim40-203ENSMUST00000172711 Ak9G3UYQ4 1894 aa14.2□□□□□ -0.14
Trim40-203ENSMUST00000172711 Neo1P97798 1493 aa14.19□□□□□ -0.14
Trim40-203ENSMUST00000172711 Soga1E1U8D0 1418 aa14.18□□□□□ -0.14
Trim40-203ENSMUST00000172711 Shroom4Q1W617 1475 aa14.16□□□□□ -0.14
Trim40-203ENSMUST00000172711 PxdnQ3UQ28 1475 aa14.16□□□□□ -0.14
Trim40-203ENSMUST00000172711 WizO88286 1684 aaKnown RBP14.15□□□□□ -0.14
Trim40-203ENSMUST00000172711 Map3k4O08648 1597 aa14.15□□□□□ -0.14
Trim40-203ENSMUST00000172711 Ppp1r18Q8BQ30 594 aa14.12□□□□□ -0.15
Trim40-203ENSMUST00000172711 Arhgap27A2AB59 869 aa14.11□□□□□ -0.15
Trim40-203ENSMUST00000172711 Dmrt2Q8BG36 561 aa14.11□□□□□ -0.15
Trim40-203ENSMUST00000172711 TchhA0A0B4J1F9 1599 aa14.1□□□□□ -0.15
Trim40-203ENSMUST00000172711 Eif4g1Q6NZJ6 1600 aaKnown RBP14.1□□□□□ -0.15
Trim40-203ENSMUST00000172711 Gm14025A2AP89 1413 aa14.1□□□□□ -0.15
Trim40-203ENSMUST00000172711 AI481877A2ALV5 1481 aa14.1□□□□□ -0.15
Trim40-203ENSMUST00000172711 Adamts12Q811B3 1600 aa14.08□□□□□ -0.15
Trim40-203ENSMUST00000172711 Arhgef12Q8R4H2 1543 aaKnown RBP14.08□□□□□ -0.16
Trim40-203ENSMUST00000172711 Trap1aP19473 224 aa14.07□□□□□ -0.16
Trim40-203ENSMUST00000172711 Ifnlr1Q8CGK5 535 aa14.05□□□□□ -0.16
Trim40-203ENSMUST00000172711 Slx4Q6P1D7 1565 aa14.05□□□□□ -0.16
Trim40-203ENSMUST00000172711 EprsQ8CGC7 1512 aaKnown RBP14.05□□□□□ -0.16
Trim40-203ENSMUST00000172711 Ttc37F8VPK0 1563 aa14.02□□□□□ -0.16
Trim40-203ENSMUST00000172711 Zeb1Q64318 1117 aa14.01□□□□□ -0.17
Trim40-203ENSMUST00000172711 AdgbG3UZ78 1657 aa14.01□□□□□ -0.17
Trim40-203ENSMUST00000172711 Plekhg3Q4VAC9 1341 aa14.01□□□□□ -0.17
Trim40-203ENSMUST00000172711 Clasp1Q80TV8 1535 aaKnown RBP14□□□□□ -0.17
Trim40-203ENSMUST00000172711 Mapkbp1Q6NS57 1503 aa13.99□□□□□ -0.17
Trim40-203ENSMUST00000172711 Alpk3Q924C5 1678 aa13.96□□□□□ -0.17
Trim40-203ENSMUST00000172711 Depdc5P61460 1591 aa13.96□□□□□ -0.17
Trim40-203ENSMUST00000172711 Mroh2bQ7M6Y6 1581 aa13.96□□□□□ -0.18
Trim40-203ENSMUST00000172711 Jph4Q80WT0 628 aa13.94□□□□□ -0.18
Trim40-203ENSMUST00000172711 Rpap1Q80TE0 1409 aa13.94□□□□□ -0.18
Trim40-203ENSMUST00000172711 Znf608Q56A10 1511 aa13.93□□□□□ -0.18
Trim40-203ENSMUST00000172711 Fkbp15Q6P9Q6 1216 aaKnown RBP13.93□□□□□ -0.18
Trim40-203ENSMUST00000172711 Dnajc5gQ8C632 165 aa13.93□□□□□ -0.18
Trim40-203ENSMUST00000172711 Lrrc9Q8CDN9 1456 aa13.93□□□□□ -0.18
Trim40-203ENSMUST00000172711 Arid3cA6PWV5 409 aa13.92□□□□□ -0.18
Trim40-203ENSMUST00000172711 Abca5Q8K448 1642 aa13.92□□□□□ -0.18
Trim40-203ENSMUST00000172711 Arhgef11Q68FM7 1552 aa13.9□□□□□ -0.19
Trim40-203ENSMUST00000172711 Gm7298A0A0N4SVU1 1476 aa13.89□□□□□ -0.19
Trim40-203ENSMUST00000172711 Fndc1E9Q043 1732 aa13.88□□□□□ -0.19
Trim40-203ENSMUST00000172711 Zfyve16Q80U44 1528 aa13.85□□□□□ -0.19
Trim40-203ENSMUST00000172711 Cul7Q8VE73 1689 aa13.84□□□□□ -0.19
Trim40-203ENSMUST00000172711 Kdm5bQ80Y84 1544 aa13.83□□□□□ -0.19
Trim40-203ENSMUST00000172711 Carmil1Q6EDY6 1374 aa13.83□□□□□ -0.2
Trim40-203ENSMUST00000172711 Slc4a1apE9PX68 744 aa13.83□□□□□ -0.2
Trim40-203ENSMUST00000172711 Map3k1P53349 1493 aa13.83□□□□□ -0.2
Trim40-203ENSMUST00000172711 Rrbp1Q99PL5 1605 aaKnown RBP13.82□□□□□ -0.2
Trim40-203ENSMUST00000172711 WrnO09053 1401 aa13.82□□□□□ -0.2
Trim40-203ENSMUST00000172711 Wdr7Q920I9 1489 aa13.8□□□□□ -0.2
Trim40-203ENSMUST00000172711 Npm2Q80W85 207 aa13.8□□□□□ -0.2
Trim40-203ENSMUST00000172711 Igf1rQ60751 1373 aa13.79□□□□□ -0.2
Trim40-203ENSMUST00000172711 Hoxd11P23813 323 aa13.79□□□□□ -0.2
Trim40-203ENSMUST00000172711 NhsB1AV60 1647 aa13.78□□□□□ -0.2
Trim40-203ENSMUST00000172711 Arhgap35Q91YM2 1499 aa13.77□□□□□ -0.21
Trim40-203ENSMUST00000172711 Cux1P53564 1515 aa13.76□□□□□ -0.21
Trim40-203ENSMUST00000172711 AglF8VPN4 1532 aa13.72□□□□□ -0.21
Trim40-203ENSMUST00000172711 Polr1aO35134 1717 aaKnown RBP13.72□□□□□ -0.21
Trim40-203ENSMUST00000172711 MlecQ6ZQI3 291 aaKnown RBP13.71□□□□□ -0.21
Trim40-203ENSMUST00000172711 Atp10dQ8K2X1 1416 aa13.7□□□□□ -0.22
Trim40-203ENSMUST00000172711 Arhgap31A6X8Z5 1425 aa13.7□□□□□ -0.22
Trim40-203ENSMUST00000172711 Brwd3A2AHJ4 1799 aa13.69□□□□□ -0.22
Trim40-203ENSMUST00000172711 Mroh2aD3Z750 1679 aa13.69□□□□□ -0.22
Trim40-203ENSMUST00000172711 Rnf17Q99MV7 1640 aa13.68□□□□□ -0.22
Trim40-203ENSMUST00000172711 Gcc2Q8CHG3 1679 aa13.67□□□□□ -0.22
Trim40-203ENSMUST00000172711 Ccdc141E9Q8Q6 1531 aa13.67□□□□□ -0.22
Trim40-203ENSMUST00000172711 Kdm6bQ5NCY0 1641 aa13.65□□□□□ -0.22
Trim40-203ENSMUST00000172711 Cyb5rlB1AS42 316 aa13.62□□□□□ -0.23
Trim40-203ENSMUST00000172711 Abca8bQ8K440 1620 aa13.62□□□□□ -0.23
Trim40-203ENSMUST00000172711 Ercc6l2Q9JIM3 1537 aa13.6□□□□□ -0.23
Trim40-203ENSMUST00000172711 A2mQ6GQT1 1474 aa13.59□□□□□ -0.23
Trim40-203ENSMUST00000172711 Fyco1Q8VDC1 1437 aa13.59□□□□□ -0.23
Trim40-203ENSMUST00000172711 Clip1Q922J3 1391 aa13.59□□□□□ -0.23
Trim40-203ENSMUST00000172711 Hecw2Q6I6G8 1578 aa13.58□□□□□ -0.23
Trim40-203ENSMUST00000172711 Qser1A2BIE1 1698 aa13.58□□□□□ -0.24
Trim40-203ENSMUST00000172711 Kiaa1210E9Q0C6 1637 aa13.57□□□□□ -0.24
Trim40-203ENSMUST00000172711 Rapgef6Q5NCJ1 1609 aa13.55□□□□□ -0.24
Trim40-203ENSMUST00000172711 Fancd2Q80V62 1450 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms