RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Hdac5Q9Z2V6 1113 aa16.28■□□□□ 0.2
Pdlim5-204ENSMUST00000168967 Pip4p2Q9CZX7 257 aa16.28■□□□□ 0.2
Pdlim5-204ENSMUST00000168967 Zbtb22Q9Z0G7 638 aa16.26■□□□□ 0.19
Pdlim5-204ENSMUST00000168967 Ferd3lQ923Z4 168 aa16.24■□□□□ 0.19
Pdlim5-204ENSMUST00000168967 Rb1cc1Q9ESK9 1588 aa16.24■□□□□ 0.19
Pdlim5-204ENSMUST00000168967 Clcn6O35454 870 aa16.19■□□□□ 0.18
Pdlim5-204ENSMUST00000168967 TimelessQ9R1X4 1197 aa16.13■□□□□ 0.17
Pdlim5-204ENSMUST00000168967 Baz1aO88379 1555 aa16.13■□□□□ 0.17
Pdlim5-204ENSMUST00000168967 Slc4a2P13808 1237 aaKnown RBP16.12■□□□□ 0.17
Pdlim5-204ENSMUST00000168967 Zbtb7bQ64321 544 aa16.1■□□□□ 0.17
Pdlim5-204ENSMUST00000168967 Kdm5dQ62240 1548 aa16.09■□□□□ 0.17
Pdlim5-204ENSMUST00000168967 NacadQ5SWP3 1504 aa16.07■□□□□ 0.16
Pdlim5-204ENSMUST00000168967 SnphQ80U23 495 aa16.07■□□□□ 0.16
Pdlim5-204ENSMUST00000168967 Prdm16A2A935 1275 aa16.05■□□□□ 0.16
Pdlim5-204ENSMUST00000168967 Gm13697A2AK42 830 aa16.01■□□□□ 0.15
Pdlim5-204ENSMUST00000168967 Skap1Q3UUV5 355 aa16.01■□□□□ 0.15
Pdlim5-204ENSMUST00000168967 Cep164Q5DU05 1446 aa16.01■□□□□ 0.15
Pdlim5-204ENSMUST00000168967 Ccdc136Q3TVA9 1136 aa16■□□□□ 0.15
Pdlim5-204ENSMUST00000168967 PygbQ8CI94 843 aaKnown RBP15.99■□□□□ 0.15
Pdlim5-204ENSMUST00000168967 Atad2Q8CDM1 1040 aa15.98■□□□□ 0.15
Pdlim5-204ENSMUST00000168967 Pdap1Q3UHX2 181 aaKnown RBP15.98■□□□□ 0.15
Pdlim5-204ENSMUST00000168967 Chrm1P12657 460 aa15.92■□□□□ 0.14
Pdlim5-204ENSMUST00000168967 CrebzfQ91ZR3 358 aa15.91■□□□□ 0.14
Pdlim5-204ENSMUST00000168967 Cacnb1Q8R3Z5 597 aa15.9■□□□□ 0.14
Pdlim5-204ENSMUST00000168967 Crybg2B7ZCC2 1516 aa15.9■□□□□ 0.14
Pdlim5-204ENSMUST00000168967 Slc24a1Q91WD8 1130 aa15.88■□□□□ 0.13
Pdlim5-204ENSMUST00000168967 Dok7Q18PE0 504 aa15.87■□□□□ 0.13
Pdlim5-204ENSMUST00000168967 Taok2Q6ZQ29 1240 aa15.87■□□□□ 0.13
Pdlim5-204ENSMUST00000168967 Rgl2Q61193 778 aa15.86■□□□□ 0.13
Pdlim5-204ENSMUST00000168967 Supt5hO55201 1082 aaKnown RBP15.82■□□□□ 0.12
Pdlim5-204ENSMUST00000168967 Smarca2Q6DIC0 1577 aa15.8■□□□□ 0.12
Pdlim5-204ENSMUST00000168967 Rsph6aQ8CDR2 708 aa15.79■□□□□ 0.12
Pdlim5-204ENSMUST00000168967 Sycp2Q9CUU3 1500 aa15.78■□□□□ 0.12
Pdlim5-204ENSMUST00000168967 Arid3aQ62431 601 aa15.75■□□□□ 0.11
Pdlim5-204ENSMUST00000168967 Noa1Q9JJG9 693 aaKnown RBP15.74■□□□□ 0.11
Pdlim5-204ENSMUST00000168967 NefmP08553 848 aa15.73■□□□□ 0.11
Pdlim5-204ENSMUST00000168967 UncxO08934 530 aa15.71■□□□□ 0.11
Pdlim5-204ENSMUST00000168967 Las1lA2BE28 776 aaKnown RBP15.7■□□□□ 0.1
Pdlim5-204ENSMUST00000168967 Stk3Q9JI10 497 aa15.7■□□□□ 0.1
Pdlim5-204ENSMUST00000168967 Zeb1Q64318 1117 aa15.64■□□□□ 0.1
Pdlim5-204ENSMUST00000168967 Mkrn3Q60764 544 aa15.63■□□□□ 0.09
Pdlim5-204ENSMUST00000168967 Neurod1Q60867 357 aa15.62■□□□□ 0.09
Pdlim5-204ENSMUST00000168967 BicraF8VPZ9 1578 aa15.6■□□□□ 0.09
Pdlim5-204ENSMUST00000168967 Stk25Q9Z2W1 426 aa15.58■□□□□ 0.08
Pdlim5-204ENSMUST00000168967 Cngb1E1AZ71 1325 aa15.57■□□□□ 0.08
Pdlim5-204ENSMUST00000168967 Dnajc5P60904 198 aa15.56■□□□□ 0.08
Pdlim5-204ENSMUST00000168967 P3h3Q8CG70 732 aa15.56■□□□□ 0.08
Pdlim5-204ENSMUST00000168967 Pcdhb17Q91VD8 799 aa15.52■□□□□ 0.08
Pdlim5-204ENSMUST00000168967 Stk24Q99KH8 431 aa15.52■□□□□ 0.07
Pdlim5-204ENSMUST00000168967 Rsf1E9PWW9 1441 aaKnown RBP15.5■□□□□ 0.07
Pdlim5-204ENSMUST00000168967 Map4k4P97820 1233 aaKnown RBP15.47■□□□□ 0.07
Pdlim5-204ENSMUST00000168967 Brd4Q9ESU6 1400 aaKnown RBP15.47■□□□□ 0.07
Pdlim5-204ENSMUST00000168967 Ndufv2Q9D6J6 248 aa15.47■□□□□ 0.07
Pdlim5-204ENSMUST00000168967 Arhgef1Q61210 920 aaKnown RBP15.43■□□□□ 0.06
Pdlim5-204ENSMUST00000168967 Zranb1Q7M760 708 aa15.43■□□□□ 0.06
Pdlim5-204ENSMUST00000168967 Anks4bQ8K3X6 423 aa15.42■□□□□ 0.06
Pdlim5-204ENSMUST00000168967 Mier1Q5UAK0 511 aa15.41■□□□□ 0.06
Pdlim5-204ENSMUST00000168967 Znf579Q80VM4 562 aa15.41■□□□□ 0.06
Pdlim5-204ENSMUST00000168967 Golga3P55937 1487 aa15.4■□□□□ 0.06
Pdlim5-204ENSMUST00000168967 Cypt1Q8CH20 168 aa15.4■□□□□ 0.06
Pdlim5-204ENSMUST00000168967 Sgip1Q8VD37 806 aa15.36■□□□□ 0.05
Pdlim5-204ENSMUST00000168967 Tulp1Q9Z273 543 aa15.36■□□□□ 0.05
Pdlim5-204ENSMUST00000168967 Bclaf1Q8K019 919 aaKnown RBP15.34■□□□□ 0.05
Pdlim5-204ENSMUST00000168967 Sall2Q9QX96 1004 aa15.34■□□□□ 0.05
Pdlim5-204ENSMUST00000168967 Esf1Q3V1V3 845 aaKnown RBP15.32■□□□□ 0.04
Pdlim5-204ENSMUST00000168967 Ccdc88bQ4QRL3 1481 aa15.31■□□□□ 0.04
Pdlim5-204ENSMUST00000168967 Myt1Q8CFC2 1127 aa15.31■□□□□ 0.04
Pdlim5-204ENSMUST00000168967 Gjc2Q8BQU6 440 aa15.26■□□□□ 0.03
Pdlim5-204ENSMUST00000168967 E9Q0B3 247 aa15.25■□□□□ 0.03
Pdlim5-204ENSMUST00000168967 Prim1P20664 417 aa15.25■□□□□ 0.03
Pdlim5-204ENSMUST00000168967 Znf516Q7TSH3 1157 aa15.25■□□□□ 0.03
Pdlim5-204ENSMUST00000168967 Znf710Q3U288 666 aa15.24■□□□□ 0.03
Pdlim5-204ENSMUST00000168967 Foxp4Q9DBY0 795 aaKnown RBP15.24■□□□□ 0.03
Pdlim5-204ENSMUST00000168967 Map3k10Q66L42 940 aa15.22■□□□□ 0.03
Pdlim5-204ENSMUST00000168967 Top2bQ64511 1612 aa15.19■□□□□ 0.02
Pdlim5-204ENSMUST00000168967 Gm45233A0A0N4SVE0 221 aa15.19■□□□□ 0.02
Pdlim5-204ENSMUST00000168967 Synj1Q8CHC4 1574 aa15.18■□□□□ 0.02
Pdlim5-204ENSMUST00000168967 Aplp2Q06335 707 aa15.16■□□□□ 0.02
Pdlim5-204ENSMUST00000168967 ClspnQ80YR7 1315 aa15.14■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Cecr2E9Q2Z1 1453 aa15.14■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Spryd3E9Q9B3 442 aa15.14■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Cnksr2Q80YA9 1032 aa15.14■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 ChgaP26339 463 aaKnown RBP15.13■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Cdk11bP24788 784 aaKnown RBP15.11■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Pds5bQ4VA53 1446 aaKnown RBP15.1■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Rapgef2Q8CHG7 1496 aa15.09■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 1700006A11RikB9EHI3 544 aa15.09■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 ArntlQ9WTL8 632 aa15.09■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 CftrP26361 1476 aa15.09■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Erich4Q3UNU4 136 aa15.08■□□□□ 0.01
Pdlim5-204ENSMUST00000168967 Kank4Q6P9J5 1016 aa15.08■□□□□ 0
Pdlim5-204ENSMUST00000168967 Pdzrn4E9PUZ9 1014 aa15.07■□□□□ 0
Pdlim5-204ENSMUST00000168967 Csrnp3P59055 597 aa15.07■□□□□ 0
Pdlim5-204ENSMUST00000168967 CenpbP27790 599 aa15.05■□□□□ -0
Pdlim5-204ENSMUST00000168967 Nop58Q6DFW4 536 aaKnown RBP15.05■□□□□ -0
Pdlim5-204ENSMUST00000168967 Nap1l5Q9JJF0 156 aa15.05■□□□□ -0
Pdlim5-204ENSMUST00000168967 Cttnbp2B9EJA2 1648 aa15.04■□□□□ -0
Pdlim5-204ENSMUST00000168967 Jph4Q80WT0 628 aa15.02□□□□□ -0.01
Pdlim5-204ENSMUST00000168967 Thoc2B1AZI6 1594 aaKnown RBP15.01□□□□□ -0.01
Pdlim5-204ENSMUST00000168967 Wdr66E9Q743 1299 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms