RNA–Protein interactions for RNA: ENSMUST00000167924.1

Tnf-202, Transcript of Tumor necrosis factor, mousemouse

TSL 1 (best) BASIC

Gene Tnf, Length 1,462 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnf-202ENSMUST00000167924 Arap1Q4LDD4 1452 aa13.52□□□□□ -0.24
Tnf-202ENSMUST00000167924 Carmil1Q6EDY6 1374 aa13.49□□□□□ -0.25
Tnf-202ENSMUST00000167924 Kcna4Q61423 654 aa13.48□□□□□ -0.25
Tnf-202ENSMUST00000167924 Arhgef5E9Q7D5 1581 aa13.48□□□□□ -0.25
Tnf-202ENSMUST00000167924 Setd5Q5XJV7 1441 aa13.47□□□□□ -0.25
Tnf-202ENSMUST00000167924 Mier1Q5UAK0 511 aa13.46□□□□□ -0.25
Tnf-202ENSMUST00000167924 UbtfP25976 765 aaKnown RBP13.45□□□□□ -0.26
Tnf-202ENSMUST00000167924 Rad54l2Q99NG0 1466 aa13.45□□□□□ -0.26
Tnf-202ENSMUST00000167924 Cux1P53564 1515 aa13.45□□□□□ -0.26
Tnf-202ENSMUST00000167924 Pcf11G3X9Z4 1553 aa13.44□□□□□ -0.26
Tnf-202ENSMUST00000167924 Trap1aP19473 224 aa13.44□□□□□ -0.26
Tnf-202ENSMUST00000167924 Plekhg3Q4VAC9 1341 aa13.43□□□□□ -0.26
Tnf-202ENSMUST00000167924 Lmo7E9PYF4 1699 aaKnown RBP13.43□□□□□ -0.26
Tnf-202ENSMUST00000167924 Tiam1Q60610 1591 aa13.42□□□□□ -0.26
Tnf-202ENSMUST00000167924 Znf219Q6IQX8 726 aa13.42□□□□□ -0.26
Tnf-202ENSMUST00000167924 Plb1Q3TTY0 1478 aa13.41□□□□□ -0.26
Tnf-202ENSMUST00000167924 Polr1aO35134 1717 aaKnown RBP13.41□□□□□ -0.26
Tnf-202ENSMUST00000167924 Urb2E9Q7L1 1524 aaKnown RBP13.41□□□□□ -0.26
Tnf-202ENSMUST00000167924 Ap3b1Q9Z1T1 1105 aa13.4□□□□□ -0.26
Tnf-202ENSMUST00000167924 Pla2r1Q62028 1487 aa13.39□□□□□ -0.27
Tnf-202ENSMUST00000167924 Magi3Q9EQJ9 1476 aa13.38□□□□□ -0.27
Tnf-202ENSMUST00000167924 Fyco1Q8VDC1 1437 aa13.36□□□□□ -0.27
Tnf-202ENSMUST00000167924 Slx4Q6P1D7 1565 aa13.36□□□□□ -0.27
Tnf-202ENSMUST00000167924 Lrriq1Q0P5X1 1673 aa13.36□□□□□ -0.27
Tnf-202ENSMUST00000167924 Pbrm1Q8BSQ9 1634 aaKnown RBP13.35□□□□□ -0.27
Tnf-202ENSMUST00000167924 Grin2aP35436 1464 aa13.35□□□□□ -0.27
Tnf-202ENSMUST00000167924 Naip1Q9QWK5 1403 aa13.34□□□□□ -0.27
Tnf-202ENSMUST00000167924 Gpatch8A2A6A1 1505 aa13.34□□□□□ -0.27
Tnf-202ENSMUST00000167924 Disp1Q3TDN0 1521 aa13.34□□□□□ -0.27
Tnf-202ENSMUST00000167924 Peg3Q3URU2 1571 aa13.34□□□□□ -0.27
Tnf-202ENSMUST00000167924 EprsQ8CGC7 1512 aaKnown RBP13.33□□□□□ -0.27
Tnf-202ENSMUST00000167924 Ncapd3Q6ZQK0 1506 aa13.33□□□□□ -0.28
Tnf-202ENSMUST00000167924 Rpap1Q80TE0 1409 aa13.33□□□□□ -0.28
Tnf-202ENSMUST00000167924 Ift140E9PY46 1464 aa13.32□□□□□ -0.28
Tnf-202ENSMUST00000167924 NefmP08553 848 aa13.32□□□□□ -0.28
Tnf-202ENSMUST00000167924 Abca5Q8K448 1642 aa13.31□□□□□ -0.28
Tnf-202ENSMUST00000167924 Setd1bQ8CFT2 1985 aa13.3□□□□□ -0.28
Tnf-202ENSMUST00000167924 CntlnA2AM05 1397 aa13.29□□□□□ -0.28
Tnf-202ENSMUST00000167924 WizO88286 1684 aaKnown RBP13.28□□□□□ -0.28
Tnf-202ENSMUST00000167924 Adamts12Q811B3 1600 aa13.28□□□□□ -0.28
Tnf-202ENSMUST00000167924 BlmO88700 1416 aa13.28□□□□□ -0.28
Tnf-202ENSMUST00000167924 Nup160Q9Z0W3 1402 aaKnown RBP13.26□□□□□ -0.29
Tnf-202ENSMUST00000167924 Abca16E9PWJ7 1678 aa13.25□□□□□ -0.29
Tnf-202ENSMUST00000167924 Gm7298A0A0N4SVU1 1476 aa13.25□□□□□ -0.29
Tnf-202ENSMUST00000167924 TchhA0A0B4J1F9 1599 aa13.25□□□□□ -0.29
Tnf-202ENSMUST00000167924 Slc34a2Q9DBP0 697 aa13.23□□□□□ -0.29
Tnf-202ENSMUST00000167924 CadpsQ80TJ1 1355 aa13.23□□□□□ -0.29
Tnf-202ENSMUST00000167924 Aebp1Q640N1 1128 aa13.22□□□□□ -0.29
Tnf-202ENSMUST00000167924 PxdnQ3UQ28 1475 aa13.2□□□□□ -0.3
Tnf-202ENSMUST00000167924 Gm1043A0A140LJC2 1431 aa13.19□□□□□ -0.3
Tnf-202ENSMUST00000167924 Soga1E1U8D0 1418 aa13.19□□□□□ -0.3
Tnf-202ENSMUST00000167924 Lmod2Q3UHZ5 550 aa13.17□□□□□ -0.3
Tnf-202ENSMUST00000167924 Eif4g3Q80XI3 1579 aaKnown RBP13.17□□□□□ -0.3
Tnf-202ENSMUST00000167924 Cc2d2bA0A286YDU8 1405 aa13.16□□□□□ -0.3
Tnf-202ENSMUST00000167924 Rusc2Q80U22 1514 aa13.16□□□□□ -0.3
Tnf-202ENSMUST00000167924 Kdm5bQ80Y84 1544 aa13.15□□□□□ -0.3
Tnf-202ENSMUST00000167924 Abcc2Q8VI47 1543 aa13.14□□□□□ -0.31
Tnf-202ENSMUST00000167924 Kif27Q7M6Z4 1394 aa13.11□□□□□ -0.31
Tnf-202ENSMUST00000167924 3425401B19RikD3Z1D3 1412 aa13.1□□□□□ -0.31
Tnf-202ENSMUST00000167924 Lmtk2Q3TYD6 1471 aa13.08□□□□□ -0.31
Tnf-202ENSMUST00000167924 Gcc2Q8CHG3 1679 aa13.08□□□□□ -0.32
Tnf-202ENSMUST00000167924 BC005561E9Q5E2 1589 aa13.07□□□□□ -0.32
Tnf-202ENSMUST00000167924 WrnO09053 1401 aa13.07□□□□□ -0.32
Tnf-202ENSMUST00000167924 Rapgef6Q5NCJ1 1609 aa13.07□□□□□ -0.32
Tnf-202ENSMUST00000167924 Shroom2A2ALU4 1481 aa13.07□□□□□ -0.32
Tnf-202ENSMUST00000167924 NexmifQ5DTT1 1515 aa13.07□□□□□ -0.32
Tnf-202ENSMUST00000167924 Map3k4O08648 1597 aa13.06□□□□□ -0.32
Tnf-202ENSMUST00000167924 Arhgap27A2AB59 869 aa13.05□□□□□ -0.32
Tnf-202ENSMUST00000167924 Ccnb3Q810T2 1396 aa13.03□□□□□ -0.32
Tnf-202ENSMUST00000167924 Pcgf6Q99NA9 353 aa13.03□□□□□ -0.32
Tnf-202ENSMUST00000167924 Dnmt1P13864 1620 aaKnown RBP13.02□□□□□ -0.32
Tnf-202ENSMUST00000167924 A2mQ6GQT1 1474 aa13.01□□□□□ -0.33
Tnf-202ENSMUST00000167924 Arhgef11Q68FM7 1552 aa13.01□□□□□ -0.33
Tnf-202ENSMUST00000167924 Zcchc11B2RX14 1644 aaKnown RBP13.01□□□□□ -0.33
Tnf-202ENSMUST00000167924 Supt5hO55201 1082 aaKnown RBP13□□□□□ -0.33
Tnf-202ENSMUST00000167924 Mug1P28665 1476 aa12.99□□□□□ -0.33
Tnf-202ENSMUST00000167924 Fhad1A6PWD2 1420 aa12.99□□□□□ -0.33
Tnf-202ENSMUST00000167924 Fam50aQ9WV03 339 aaKnown RBP12.99□□□□□ -0.33
Tnf-202ENSMUST00000167924 Naip2Q9QUK4 1447 aa12.99□□□□□ -0.33
Tnf-202ENSMUST00000167924 Las1lA2BE28 776 aaKnown RBP12.98□□□□□ -0.33
Tnf-202ENSMUST00000167924 TonslQ6NZL6 1363 aa12.98□□□□□ -0.33
Tnf-202ENSMUST00000167924 Mia2Q91ZV0 1396 aa12.98□□□□□ -0.33
Tnf-202ENSMUST00000167924 Cdc42bpaQ3UU96 1719 aa12.98□□□□□ -0.33
Tnf-202ENSMUST00000167924 Col17a1Q07563 1470 aa12.97□□□□□ -0.33
Tnf-202ENSMUST00000167924 Ncoa3O09000 1398 aa12.97□□□□□ -0.33
Tnf-202ENSMUST00000167924 Vps8Q0P5W1 1427 aa12.96□□□□□ -0.33
Tnf-202ENSMUST00000167924 Ccdc141E9Q8Q6 1531 aa12.96□□□□□ -0.34
Tnf-202ENSMUST00000167924 Ncoa2Q61026 1462 aa12.95□□□□□ -0.34
Tnf-202ENSMUST00000167924 Arhgap31A6X8Z5 1425 aa12.95□□□□□ -0.34
Tnf-202ENSMUST00000167924 Mroh2aD3Z750 1679 aa12.94□□□□□ -0.34
Tnf-202ENSMUST00000167924 Neo1P97798 1493 aa12.94□□□□□ -0.34
Tnf-202ENSMUST00000167924 Kiaa1551Q5DTW7 1521 aa12.94□□□□□ -0.34
Tnf-202ENSMUST00000167924 Rrbp1Q99PL5 1605 aaKnown RBP12.93□□□□□ -0.34
Tnf-202ENSMUST00000167924 Fgd6Q69ZL1 1399 aa12.92□□□□□ -0.34
Tnf-202ENSMUST00000167924 Arhgef12Q8R4H2 1543 aaKnown RBP12.91□□□□□ -0.34
Tnf-202ENSMUST00000167924 Adcy10Q8C0T9 1614 aa12.9□□□□□ -0.34
Tnf-202ENSMUST00000167924 Magi1Q6RHR9 1471 aa12.9□□□□□ -0.34
Tnf-202ENSMUST00000167924 AknaQ80VW7 1404 aa12.89□□□□□ -0.35
Tnf-202ENSMUST00000167924 UacaQ8CGB3 1411 aa12.89□□□□□ -0.35
Tnf-202ENSMUST00000167924 Dhx57Q6P5D3 1388 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 262.2 ms