RNA–Protein interactions for RNA: ENSMUST00000113697.7

Tpm1-213, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-213ENSMUST00000113697 Rsph4aQ8BYM7 716 aa16.2■□□□□ 0.18
Tpm1-213ENSMUST00000113697 PogzQ8BZH4 1409 aaKnown RBP16.18■□□□□ 0.18
Tpm1-213ENSMUST00000113697 Grin2bQ01097 1482 aa16.16■□□□□ 0.18
Tpm1-213ENSMUST00000113697 Crocc2F6XLV1 1638 aa16.16■□□□□ 0.18
Tpm1-213ENSMUST00000113697 C1qtnf12Q8R2Z0 308 aa16.16■□□□□ 0.18
Tpm1-213ENSMUST00000113697 Plb1Q3TTY0 1478 aa16.15■□□□□ 0.18
Tpm1-213ENSMUST00000113697 Urb2E9Q7L1 1524 aaKnown RBP16.14■□□□□ 0.17
Tpm1-213ENSMUST00000113697 Znf219Q6IQX8 726 aa16.14■□□□□ 0.17
Tpm1-213ENSMUST00000113697 Duox2A2AQ99 1517 aa16.12■□□□□ 0.17
Tpm1-213ENSMUST00000113697 NrkQ9R0G8 1455 aa16.08■□□□□ 0.16
Tpm1-213ENSMUST00000113697 Eif4g3Q80XI3 1579 aaKnown RBP16.05■□□□□ 0.16
Tpm1-213ENSMUST00000113697 Shroom4Q1W617 1475 aa16.02■□□□□ 0.15
Tpm1-213ENSMUST00000113697 Efcab5A0JP43 1406 aa16.02■□□□□ 0.15
Tpm1-213ENSMUST00000113697 PtprkP35822 1457 aa16.01■□□□□ 0.15
Tpm1-213ENSMUST00000113697 Rimbp2Q80U40 1072 aa16.01■□□□□ 0.15
Tpm1-213ENSMUST00000113697 Samd9lQ69Z37 1561 aa16■□□□□ 0.15
Tpm1-213ENSMUST00000113697 Ift140E9PY46 1464 aa15.99■□□□□ 0.15
Tpm1-213ENSMUST00000113697 Rpgrip1Q9EPQ2 1331 aa15.97■□□□□ 0.15
Tpm1-213ENSMUST00000113697 Rapgef2Q8CHG7 1496 aa15.95■□□□□ 0.14
Tpm1-213ENSMUST00000113697 Disp1Q3TDN0 1521 aa15.93■□□□□ 0.14
Tpm1-213ENSMUST00000113697 Rad54l2Q99NG0 1466 aa15.92■□□□□ 0.14
Tpm1-213ENSMUST00000113697 Setd1bQ8CFT2 1985 aa15.91■□□□□ 0.14
Tpm1-213ENSMUST00000113697 Eif4g1Q6NZJ6 1600 aaKnown RBP15.89■□□□□ 0.13
Tpm1-213ENSMUST00000113697 Zeb1Q64318 1117 aa15.88■□□□□ 0.13
Tpm1-213ENSMUST00000113697 Rusc2Q80U22 1514 aa15.88■□□□□ 0.13
Tpm1-213ENSMUST00000113697 Pbrm1Q8BSQ9 1634 aaKnown RBP15.87■□□□□ 0.13
Tpm1-213ENSMUST00000113697 Bach1P97302 739 aa15.87■□□□□ 0.13
Tpm1-213ENSMUST00000113697 Vsig10D3YX43 558 aa15.84■□□□□ 0.13
Tpm1-213ENSMUST00000113697 Nup160Q9Z0W3 1402 aaKnown RBP15.84■□□□□ 0.13
Tpm1-213ENSMUST00000113697 SynmQ70IV5 1561 aa15.83■□□□□ 0.13
Tpm1-213ENSMUST00000113697 Magi3Q9EQJ9 1476 aa15.83■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Mroh2bQ7M6Y6 1581 aa15.82■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Grin2aP35436 1464 aa15.82■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Cep162Q6ZQ06 1403 aa15.81■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Arhgap35Q91YM2 1499 aa15.8■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Gpatch8A2A6A1 1505 aa15.8■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Map3k1P53349 1493 aa15.79■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Cc2d2bA0A286YDU8 1405 aa15.79■□□□□ 0.12
Tpm1-213ENSMUST00000113697 Pla2r1Q62028 1487 aa15.77■□□□□ 0.12
Tpm1-213ENSMUST00000113697 AqrQ8CFQ3 1481 aaKnown RBP15.73■□□□□ 0.11
Tpm1-213ENSMUST00000113697 ArxO35085 564 aa15.68■□□□□ 0.1
Tpm1-213ENSMUST00000113697 Tcf3P15806 651 aa15.68■□□□□ 0.1
Tpm1-213ENSMUST00000113697 Myt1lP97500 1187 aa15.68■□□□□ 0.1
Tpm1-213ENSMUST00000113697 Dnajc5P60904 198 aa15.66■□□□□ 0.1
Tpm1-213ENSMUST00000113697 Carmil1Q6EDY6 1374 aa15.66■□□□□ 0.1
Tpm1-213ENSMUST00000113697 Shroom2A2ALU4 1481 aa15.66■□□□□ 0.1
Tpm1-213ENSMUST00000113697 EprsQ8CGC7 1512 aaKnown RBP15.63■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Ms4a5Q810P8 197 aa15.63■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Polr1aO35134 1717 aaKnown RBP15.62■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Clip1Q922J3 1391 aa15.61■□□□□ 0.09
Tpm1-213ENSMUST00000113697 WizO88286 1684 aaKnown RBP15.61■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Adamts12Q811B3 1600 aa15.61■□□□□ 0.09
Tpm1-213ENSMUST00000113697 WdpcpQ8C456 722 aa15.61■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Pabpn1Q8CCS6 302 aaKnown RBP15.6■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Pelp1Q9DBD5 1123 aaKnown RBP15.6■□□□□ 0.09
Tpm1-213ENSMUST00000113697 TchhA0A0B4J1F9 1599 aa15.59■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Fgd6Q69ZL1 1399 aa15.59■□□□□ 0.09
Tpm1-213ENSMUST00000113697 Abca16E9PWJ7 1678 aa15.59■□□□□ 0.09
Tpm1-213ENSMUST00000113697 PxdnQ3UQ28 1475 aa15.58■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Arhgap27A2AB59 869 aa15.56■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Acin1Q9JIX8 1338 aaKnown RBP15.55■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Cux1P53564 1515 aa15.54■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Abcc2Q8VI47 1543 aa15.54■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Rpap1Q80TE0 1409 aa15.53■□□□□ 0.08
Tpm1-213ENSMUST00000113697 AknaQ80VW7 1404 aa15.53■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Fam163aQ8CAA5 168 aa15.53■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Ankrd26Q811D2 1581 aa15.53■□□□□ 0.08
Tpm1-213ENSMUST00000113697 CadpsQ80TJ1 1355 aa15.52■□□□□ 0.08
Tpm1-213ENSMUST00000113697 Gm7298A0A0N4SVU1 1476 aa15.52■□□□□ 0.07
Tpm1-213ENSMUST00000113697 Erich3F6QRE9 1637 aa15.52■□□□□ 0.07
Tpm1-213ENSMUST00000113697 Abca5Q8K448 1642 aa15.51■□□□□ 0.07
Tpm1-213ENSMUST00000113697 Dnmt1P13864 1620 aaKnown RBP15.49■□□□□ 0.07
Tpm1-213ENSMUST00000113697 Fyco1Q8VDC1 1437 aa15.48■□□□□ 0.07
Tpm1-213ENSMUST00000113697 Map3k4O08648 1597 aa15.48■□□□□ 0.07
Tpm1-213ENSMUST00000113697 Soga1E1U8D0 1418 aa15.46■□□□□ 0.07
Tpm1-213ENSMUST00000113697 Neo1P97798 1493 aa15.46■□□□□ 0.06
Tpm1-213ENSMUST00000113697 BC005561E9Q5E2 1589 aa15.46■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Abcc1O35379 1528 aa15.45■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Lmo7E9PYF4 1699 aaKnown RBP15.44■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Eea1Q8BL66 1411 aa15.43■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Skap1Q3UUV5 355 aa15.42■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Col17a1Q07563 1470 aa15.41■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Slx4Q6P1D7 1565 aa15.41■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Setd5Q5XJV7 1441 aa15.4■□□□□ 0.06
Tpm1-213ENSMUST00000113697 Chd1P40201 1711 aa15.39■□□□□ 0.05
Tpm1-213ENSMUST00000113697 WrnO09053 1401 aa15.38■□□□□ 0.05
Tpm1-213ENSMUST00000113697 ArsiQ32KI9 573 aa15.38■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Gapvd1Q6PAR5 1458 aa15.38■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Pcf11G3X9Z4 1553 aa15.37■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Ap3b1Q9Z1T1 1105 aa15.37■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Arap1Q4LDD4 1452 aa15.37■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Gm14025A2AP89 1413 aa15.36■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Cep170Q6A065 1588 aa15.35■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Jph4Q80WT0 628 aa15.34■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Slc34a2Q9DBP0 697 aa15.34■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Ythdc2B2RR83 1445 aaKnown RBP15.34■□□□□ 0.05
Tpm1-213ENSMUST00000113697 Arhgef5E9Q7D5 1581 aa15.33■□□□□ 0.04
Tpm1-213ENSMUST00000113697 Ttbk1Q6PCN3 1308 aa15.33■□□□□ 0.04
Tpm1-213ENSMUST00000113697 Aebp1Q640N1 1128 aa15.32■□□□□ 0.04
Tpm1-213ENSMUST00000113697 Ppp6r1Q7TSI3 856 aa15.32■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms