RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Rgl3Q3UYI5 709 aa15.48■□□□□ 0.07
Trim9-202ENSMUST00000110522 Atad2bE9Q166 1460 aaKnown RBP15.47■□□□□ 0.07
Trim9-202ENSMUST00000110522 Mrs2Q5NCE8 434 aa15.46■□□□□ 0.06
Trim9-202ENSMUST00000110522 Ttbk1Q6PCN3 1308 aa15.44■□□□□ 0.06
Trim9-202ENSMUST00000110522 Cux2P70298 1426 aa15.44■□□□□ 0.06
Trim9-202ENSMUST00000110522 Smarca4Q3TKT4 1613 aaKnown RBP15.43■□□□□ 0.06
Trim9-202ENSMUST00000110522 Plppr3Q7TPB0 716 aa15.43■□□□□ 0.06
Trim9-202ENSMUST00000110522 Hspa5P20029 655 aaKnown RBP15.42■□□□□ 0.06
Trim9-202ENSMUST00000110522 Aebp1Q640N1 1128 aa15.41■□□□□ 0.06
Trim9-202ENSMUST00000110522 Grwd1Q810D6 446 aaKnown RBP15.37■□□□□ 0.05
Trim9-202ENSMUST00000110522 Nlrp6Q91WS2 869 aa15.36■□□□□ 0.05
Trim9-202ENSMUST00000110522 Baz1bQ9Z277 1479 aa15.36■□□□□ 0.05
Trim9-202ENSMUST00000110522 Clstn2Q9ER65 966 aa15.34■□□□□ 0.05
Trim9-202ENSMUST00000110522 Phldb1Q6PDH0 1371 aaKnown RBP15.33■□□□□ 0.04
Trim9-202ENSMUST00000110522 Kif27Q7M6Z4 1394 aa15.33■□□□□ 0.04
Trim9-202ENSMUST00000110522 Cttnbp2B9EJA2 1648 aa15.32■□□□□ 0.04
Trim9-202ENSMUST00000110522 Rad21Q61550 635 aaKnown RBP15.31■□□□□ 0.04
Trim9-202ENSMUST00000110522 Anp32aO35381 247 aa15.31■□□□□ 0.04
Trim9-202ENSMUST00000110522 Rrp7aQ9D1C9 280 aaKnown RBP15.29■□□□□ 0.04
Trim9-202ENSMUST00000110522 Calr4Q3TQS0 420 aa15.29■□□□□ 0.04
Trim9-202ENSMUST00000110522 Polr3glQ8R0C0 218 aa15.28■□□□□ 0.04
Trim9-202ENSMUST00000110522 Mtus2Q3UHD3 1353 aa15.28■□□□□ 0.04
Trim9-202ENSMUST00000110522 Gm13695A2AK44 830 aa15.27■□□□□ 0.04
Trim9-202ENSMUST00000110522 Amer1Q7TS75 1132 aa15.27■□□□□ 0.04
Trim9-202ENSMUST00000110522 Aplp2Q06335 707 aa15.27■□□□□ 0.04
Trim9-202ENSMUST00000110522 Iqgap2Q3UQ44 1575 aa15.27■□□□□ 0.03
Trim9-202ENSMUST00000110522 Rpap1Q80TE0 1409 aa15.26■□□□□ 0.03
Trim9-202ENSMUST00000110522 Mia2Q91ZV0 1396 aa15.26■□□□□ 0.03
Trim9-202ENSMUST00000110522 Hdac5Q9Z2V6 1113 aa15.26■□□□□ 0.03
Trim9-202ENSMUST00000110522 1700123L14RikQ3V2K7 440 aa15.26■□□□□ 0.03
Trim9-202ENSMUST00000110522 Cabp1Q9JLK7 227 aa15.25■□□□□ 0.03
Trim9-202ENSMUST00000110522 Kdm2aP59997 1161 aa15.24■□□□□ 0.03
Trim9-202ENSMUST00000110522 LrpprcQ6PB66 1392 aaKnown RBP15.23■□□□□ 0.03
Trim9-202ENSMUST00000110522 Sin3aQ60520 1274 aaKnown RBP15.23■□□□□ 0.03
Trim9-202ENSMUST00000110522 P3h3Q8CG70 732 aa15.23■□□□□ 0.03
Trim9-202ENSMUST00000110522 Ppp4r2Q0VGB7 417 aa15.21■□□□□ 0.03
Trim9-202ENSMUST00000110522 Myt1Q8CFC2 1127 aa15.2■□□□□ 0.02
Trim9-202ENSMUST00000110522 CntlnA2AM05 1397 aa15.2■□□□□ 0.02
Trim9-202ENSMUST00000110522 Carmil1Q6EDY6 1374 aa15.2■□□□□ 0.02
Trim9-202ENSMUST00000110522 Pkd2O35245 966 aa15.2■□□□□ 0.02
Trim9-202ENSMUST00000110522 4933416C03RikQ3V063 378 aa15.2■□□□□ 0.02
Trim9-202ENSMUST00000110522 Card11Q8CIS0 1159 aa15.2■□□□□ 0.02
Trim9-202ENSMUST00000110522 Rangap1P46061 589 aaKnown RBP15.18■□□□□ 0.02
Trim9-202ENSMUST00000110522 Fyco1Q8VDC1 1437 aa15.18■□□□□ 0.02
Trim9-202ENSMUST00000110522 Mroh3A0A1D5RM54 893 aa15.17■□□□□ 0.02
Trim9-202ENSMUST00000110522 Dhx29Q6PGC1 1365 aaKnown RBP15.17■□□□□ 0.02
Trim9-202ENSMUST00000110522 AknaQ80VW7 1404 aa15.14■□□□□ 0.01
Trim9-202ENSMUST00000110522 Mphosph9A6H5Y1 991 aa15.13■□□□□ 0.01
Trim9-202ENSMUST00000110522 Wwc2Q6NXJ0 1187 aa15.13■□□□□ 0.01
Trim9-202ENSMUST00000110522 Trak1Q6PD31 939 aa15.13■□□□□ 0.01
Trim9-202ENSMUST00000110522 Map4P27546 1125 aaKnown RBP15.12■□□□□ 0.01
Trim9-202ENSMUST00000110522 Arid3cA6PWV5 409 aa15.11■□□□□ 0.01
Trim9-202ENSMUST00000110522 Cc2d2aQ8CFW7 1633 aa15.11■□□□□ 0.01
Trim9-202ENSMUST00000110522 BicraF8VPZ9 1578 aa15.11■□□□□ 0.01
Trim9-202ENSMUST00000110522 Arhgap35Q91YM2 1499 aa15.1■□□□□ 0.01
Trim9-202ENSMUST00000110522 Ofd1Q80Z25 1017 aa15.09■□□□□ 0.01
Trim9-202ENSMUST00000110522 Stk24Q99KH8 431 aa15.08■□□□□ 0.01
Trim9-202ENSMUST00000110522 Ccnb3Q810T2 1396 aa15.08■□□□□ 0
Trim9-202ENSMUST00000110522 Wdr43Q6ZQL4 677 aaKnown RBP15.08■□□□□ 0
Trim9-202ENSMUST00000110522 SafbD3YXK2 937 aaKnown RBP15.07■□□□□ 0
Trim9-202ENSMUST00000110522 ArxO35085 564 aa15.07■□□□□ 0
Trim9-202ENSMUST00000110522 Cwc22Q8C5N3 908 aaKnown RBP15.06■□□□□ 0
Trim9-202ENSMUST00000110522 Gm20521D3Z5F7 333 aa15.05■□□□□ -0
Trim9-202ENSMUST00000110522 Top2aQ01320 1528 aaKnown RBP15.04■□□□□ -0
Trim9-202ENSMUST00000110522 Rundc1Q0VDN7 615 aa15.04■□□□□ -0
Trim9-202ENSMUST00000110522 Srpk2O54781 681 aaKnown RBP15.03■□□□□ -0
Trim9-202ENSMUST00000110522 Rtl5Q5DTT4 599 aa15.01□□□□□ -0.01
Trim9-202ENSMUST00000110522 Trim26Q99PN3 545 aa15□□□□□ -0.01
Trim9-202ENSMUST00000110522 PtprkP35822 1457 aa15□□□□□ -0.01
Trim9-202ENSMUST00000110522 Shroom4Q1W617 1475 aa15□□□□□ -0.01
Trim9-202ENSMUST00000110522 Safb2Q80YR5 991 aaKnown RBP14.99□□□□□ -0.01
Trim9-202ENSMUST00000110522 WrnO09053 1401 aa14.99□□□□□ -0.01
Trim9-202ENSMUST00000110522 Upf2A2AT37 1269 aaKnown RBP14.99□□□□□ -0.01
Trim9-202ENSMUST00000110522 Rad54l2Q99NG0 1466 aa14.98□□□□□ -0.01
Trim9-202ENSMUST00000110522 Frmpd1A2AKB4 1549 aa14.97□□□□□ -0.01
Trim9-202ENSMUST00000110522 Ifit1bl1D3Z6F0 470 aa14.96□□□□□ -0.01
Trim9-202ENSMUST00000110522 Efcab5A0JP43 1406 aa14.96□□□□□ -0.01
Trim9-202ENSMUST00000110522 Exoc6Q8R313 802 aa14.96□□□□□ -0.02
Trim9-202ENSMUST00000110522 Cnga1P29974 684 aa14.95□□□□□ -0.02
Trim9-202ENSMUST00000110522 DaxxO35613 739 aa14.95□□□□□ -0.02
Trim9-202ENSMUST00000110522 Fam71e1A1L3C1 212 aa14.95□□□□□ -0.02
Trim9-202ENSMUST00000110522 Apbb1Q9QXJ1 710 aa14.95□□□□□ -0.02
Trim9-202ENSMUST00000110522 Neurod2Q62414 383 aa14.93□□□□□ -0.02
Trim9-202ENSMUST00000110522 Sart1Q9Z315 806 aaKnown RBP14.92□□□□□ -0.02
Trim9-202ENSMUST00000110522 IqubQ8CDK3 788 aa14.91□□□□□ -0.02
Trim9-202ENSMUST00000110522 Plekhh2Q8C115 1491 aa14.91□□□□□ -0.02
Trim9-202ENSMUST00000110522 Exosc9Q9JHI7 438 aaKnown RBP14.9□□□□□ -0.02
Trim9-202ENSMUST00000110522 Arap1Q4LDD4 1452 aa14.9□□□□□ -0.02
Trim9-202ENSMUST00000110522 Nup155Q99P88 1391 aaKnown RBP14.9□□□□□ -0.02
Trim9-202ENSMUST00000110522 Duox2A2AQ99 1517 aa14.89□□□□□ -0.03
Trim9-202ENSMUST00000110522 Naip1Q9QWK5 1403 aa14.89□□□□□ -0.03
Trim9-202ENSMUST00000110522 Stag3O70576 1240 aa14.88□□□□□ -0.03
Trim9-202ENSMUST00000110522 Lemd3Q9WU40 921 aa14.88□□□□□ -0.03
Trim9-202ENSMUST00000110522 Kif3bQ61771 747 aa14.86□□□□□ -0.03
Trim9-202ENSMUST00000110522 NrkQ9R0G8 1455 aa14.86□□□□□ -0.03
Trim9-202ENSMUST00000110522 Usp47Q8BY87 1376 aa14.86□□□□□ -0.03
Trim9-202ENSMUST00000110522 Tdrd9Q14BI7 1383 aa14.85□□□□□ -0.03
Trim9-202ENSMUST00000110522 Zfp644E9QA22 1323 aa14.85□□□□□ -0.03
Trim9-202ENSMUST00000110522 Grin2bQ01097 1482 aa14.84□□□□□ -0.03
Trim9-202ENSMUST00000110522 Dhx57Q6P5D3 1388 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms