RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Prdm10Q3UTQ7 1184 aa13.29□□□□□ -0.28
Trim9-201ENSMUST00000110520 Erich6D3Z6S9 713 aa13.28□□□□□ -0.28
Trim9-201ENSMUST00000110520 Cux2P70298 1426 aa13.28□□□□□ -0.28
Trim9-201ENSMUST00000110520 Baz1bQ9Z277 1479 aa13.27□□□□□ -0.28
Trim9-201ENSMUST00000110520 Aebp1Q640N1 1128 aa13.27□□□□□ -0.28
Trim9-201ENSMUST00000110520 Pelp1Q9DBD5 1123 aaKnown RBP13.27□□□□□ -0.28
Trim9-201ENSMUST00000110520 Arhgap27A2AB59 869 aa13.27□□□□□ -0.29
Trim9-201ENSMUST00000110520 Sin3aQ60520 1274 aaKnown RBP13.26□□□□□ -0.29
Trim9-201ENSMUST00000110520 Mrs2Q5NCE8 434 aa13.25□□□□□ -0.29
Trim9-201ENSMUST00000110520 Rgl3Q3UYI5 709 aa13.24□□□□□ -0.29
Trim9-201ENSMUST00000110520 SafbD3YXK2 937 aaKnown RBP13.22□□□□□ -0.29
Trim9-201ENSMUST00000110520 Anp32bQ9EST5 272 aaKnown RBP13.21□□□□□ -0.29
Trim9-201ENSMUST00000110520 P3h3Q8CG70 732 aa13.19□□□□□ -0.3
Trim9-201ENSMUST00000110520 PtprkP35822 1457 aa13.19□□□□□ -0.3
Trim9-201ENSMUST00000110520 Ttbk1Q6PCN3 1308 aa13.19□□□□□ -0.3
Trim9-201ENSMUST00000110520 Aplp2Q06335 707 aa13.18□□□□□ -0.3
Trim9-201ENSMUST00000110520 Grwd1Q810D6 446 aaKnown RBP13.18□□□□□ -0.3
Trim9-201ENSMUST00000110520 Top2aQ01320 1528 aaKnown RBP13.18□□□□□ -0.3
Trim9-201ENSMUST00000110520 Calr4Q3TQS0 420 aa13.14□□□□□ -0.31
Trim9-201ENSMUST00000110520 Cabp1Q9JLK7 227 aa13.14□□□□□ -0.31
Trim9-201ENSMUST00000110520 Phldb1Q6PDH0 1371 aaKnown RBP13.14□□□□□ -0.31
Trim9-201ENSMUST00000110520 Kif27Q7M6Z4 1394 aa13.12□□□□□ -0.31
Trim9-201ENSMUST00000110520 Top2bQ64511 1612 aa13.12□□□□□ -0.31
Trim9-201ENSMUST00000110520 LrpprcQ6PB66 1392 aaKnown RBP13.11□□□□□ -0.31
Trim9-201ENSMUST00000110520 Arhgap35Q91YM2 1499 aa13.11□□□□□ -0.31
Trim9-201ENSMUST00000110520 Rpap1Q80TE0 1409 aa13.11□□□□□ -0.31
Trim9-201ENSMUST00000110520 Wwc2Q6NXJ0 1187 aa13.09□□□□□ -0.31
Trim9-201ENSMUST00000110520 Rad21Q61550 635 aaKnown RBP13.09□□□□□ -0.31
Trim9-201ENSMUST00000110520 Anp32aO35381 247 aa13.08□□□□□ -0.32
Trim9-201ENSMUST00000110520 NeflP08551 543 aa13.08□□□□□ -0.32
Trim9-201ENSMUST00000110520 Ppp4r2Q0VGB7 417 aa13.08□□□□□ -0.32
Trim9-201ENSMUST00000110520 Arap1Q4LDD4 1452 aa13.07□□□□□ -0.32
Trim9-201ENSMUST00000110520 CntlnA2AM05 1397 aa13.07□□□□□ -0.32
Trim9-201ENSMUST00000110520 Carmil1Q6EDY6 1374 aa13.07□□□□□ -0.32
Trim9-201ENSMUST00000110520 Pkd2O35245 966 aa13.07□□□□□ -0.32
Trim9-201ENSMUST00000110520 Frmpd1A2AKB4 1549 aa13.07□□□□□ -0.32
Trim9-201ENSMUST00000110520 Mia2Q91ZV0 1396 aa13.06□□□□□ -0.32
Trim9-201ENSMUST00000110520 Dhx29Q6PGC1 1365 aaKnown RBP13.05□□□□□ -0.32
Trim9-201ENSMUST00000110520 Fyco1Q8VDC1 1437 aa13.05□□□□□ -0.32
Trim9-201ENSMUST00000110520 Mphosph9A6H5Y1 991 aa13.04□□□□□ -0.32
Trim9-201ENSMUST00000110520 Gm13697A2AK42 830 aa13.03□□□□□ -0.32
Trim9-201ENSMUST00000110520 Shroom4Q1W617 1475 aa13.03□□□□□ -0.32
Trim9-201ENSMUST00000110520 Rrp7aQ9D1C9 280 aaKnown RBP13.02□□□□□ -0.32
Trim9-201ENSMUST00000110520 Mtus2Q3UHD3 1353 aa13.02□□□□□ -0.33
Trim9-201ENSMUST00000110520 Ccnb3Q810T2 1396 aa13.02□□□□□ -0.33
Trim9-201ENSMUST00000110520 Fam71e1A1L3C1 212 aa13.02□□□□□ -0.33
Trim9-201ENSMUST00000110520 Atp1b4Q99ME6 356 aa13□□□□□ -0.33
Trim9-201ENSMUST00000110520 Rad54l2Q99NG0 1466 aa13□□□□□ -0.33
Trim9-201ENSMUST00000110520 Trak1Q6PD31 939 aa13□□□□□ -0.33
Trim9-201ENSMUST00000110520 Kdm2aP59997 1161 aa12.99□□□□□ -0.33
Trim9-201ENSMUST00000110520 Naip1Q9QWK5 1403 aa12.99□□□□□ -0.33
Trim9-201ENSMUST00000110520 Card11Q8CIS0 1159 aa12.98□□□□□ -0.33
Trim9-201ENSMUST00000110520 Ncapd3Q6ZQK0 1506 aa12.97□□□□□ -0.33
Trim9-201ENSMUST00000110520 Plppr3Q7TPB0 716 aa12.96□□□□□ -0.34
Trim9-201ENSMUST00000110520 Zfp644E9QA22 1323 aa12.95□□□□□ -0.34
Trim9-201ENSMUST00000110520 Nlrp6Q91WS2 869 aa12.94□□□□□ -0.34
Trim9-201ENSMUST00000110520 Rangap1P46061 589 aaKnown RBP12.94□□□□□ -0.34
Trim9-201ENSMUST00000110520 Polr3glQ8R0C0 218 aa12.93□□□□□ -0.34
Trim9-201ENSMUST00000110520 Wdr43Q6ZQL4 677 aaKnown RBP12.93□□□□□ -0.34
Trim9-201ENSMUST00000110520 Ofd1Q80Z25 1017 aa12.93□□□□□ -0.34
Trim9-201ENSMUST00000110520 Rundc1Q0VDN7 615 aa12.92□□□□□ -0.34
Trim9-201ENSMUST00000110520 Exoc6Q8R313 802 aa12.92□□□□□ -0.34
Trim9-201ENSMUST00000110520 Grin2bQ01097 1482 aa12.92□□□□□ -0.34
Trim9-201ENSMUST00000110520 Map4P27546 1125 aaKnown RBP12.91□□□□□ -0.34
Trim9-201ENSMUST00000110520 Duox2A2AQ99 1517 aa12.91□□□□□ -0.34
Trim9-201ENSMUST00000110520 Efcab5A0JP43 1406 aa12.91□□□□□ -0.34
Trim9-201ENSMUST00000110520 AqrQ8CFQ3 1481 aaKnown RBP12.91□□□□□ -0.34
Trim9-201ENSMUST00000110520 Slc4a3P16283 1227 aa12.9□□□□□ -0.34
Trim9-201ENSMUST00000110520 NrkQ9R0G8 1455 aa12.9□□□□□ -0.34
Trim9-201ENSMUST00000110520 Mroh2bQ7M6Y6 1581 aa12.9□□□□□ -0.34
Trim9-201ENSMUST00000110520 WrnO09053 1401 aa12.9□□□□□ -0.34
Trim9-201ENSMUST00000110520 AknaQ80VW7 1404 aa12.9□□□□□ -0.34
Trim9-201ENSMUST00000110520 Clstn2Q9ER65 966 aa12.9□□□□□ -0.34
Trim9-201ENSMUST00000110520 Mroh3A0A1D5RM54 893 aa12.89□□□□□ -0.35
Trim9-201ENSMUST00000110520 Arhgef5E9Q7D5 1581 aa12.89□□□□□ -0.35
Trim9-201ENSMUST00000110520 ArxO35085 564 aa12.86□□□□□ -0.35
Trim9-201ENSMUST00000110520 Wdr62Q3U3T8 1523 aa12.86□□□□□ -0.35
Trim9-201ENSMUST00000110520 Arid3cA6PWV5 409 aa12.86□□□□□ -0.35
Trim9-201ENSMUST00000110520 Myt1Q8CFC2 1127 aa12.84□□□□□ -0.35
Trim9-201ENSMUST00000110520 Camsap1A2AHC3 1581 aa12.84□□□□□ -0.35
Trim9-201ENSMUST00000110520 Stk24Q99KH8 431 aa12.84□□□□□ -0.35
Trim9-201ENSMUST00000110520 Usp47Q8BY87 1376 aa12.83□□□□□ -0.35
Trim9-201ENSMUST00000110520 Amer1Q7TS75 1132 aa12.83□□□□□ -0.36
Trim9-201ENSMUST00000110520 Apbb1Q9QXJ1 710 aa12.83□□□□□ -0.36
Trim9-201ENSMUST00000110520 Dnajc5bQ9CQ94 199 aa12.83□□□□□ -0.36
Trim9-201ENSMUST00000110520 4933416C03RikQ3V063 378 aa12.82□□□□□ -0.36
Trim9-201ENSMUST00000110520 PogzQ8BZH4 1409 aaKnown RBP12.82□□□□□ -0.36
Trim9-201ENSMUST00000110520 Cwc22Q8C5N3 908 aaKnown RBP12.81□□□□□ -0.36
Trim9-201ENSMUST00000110520 Ifit1bl1D3Z6F0 470 aa12.81□□□□□ -0.36
Trim9-201ENSMUST00000110520 Ecm2Q5FW85 670 aa12.8□□□□□ -0.36
Trim9-201ENSMUST00000110520 Tiam1Q60610 1591 aa12.79□□□□□ -0.36
Trim9-201ENSMUST00000110520 Trim26Q99PN3 545 aa12.79□□□□□ -0.36
Trim9-201ENSMUST00000110520 Tdrd9Q14BI7 1383 aa12.79□□□□□ -0.36
Trim9-201ENSMUST00000110520 Cnga1P29974 684 aa12.79□□□□□ -0.36
Trim9-201ENSMUST00000110520 Map3k1P53349 1493 aa12.78□□□□□ -0.36
Trim9-201ENSMUST00000110520 Plekhh2Q8C115 1491 aa12.78□□□□□ -0.36
Trim9-201ENSMUST00000110520 Neurod2Q62414 383 aa12.77□□□□□ -0.36
Trim9-201ENSMUST00000110520 Fhad1A6PWD2 1420 aa12.77□□□□□ -0.36
Trim9-201ENSMUST00000110520 Gm20521D3Z5F7 333 aa12.77□□□□□ -0.37
Trim9-201ENSMUST00000110520 Sart1Q9Z315 806 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms