RNA–Protein interactions for RNA: ENSMUST00000110053.8

Use1-202, Transcript of Vesicle transport protein USE1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Use1, Length 1,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Use1-202ENSMUST00000110053 Arhgef5E9Q7D5 1581 aa19.4■□□□□ 0.7
Use1-202ENSMUST00000110053 Abcc1O35379 1528 aa19.4■□□□□ 0.7
Use1-202ENSMUST00000110053 Gm156Q58A37 223 aa19.38■□□□□ 0.69
Use1-202ENSMUST00000110053 Pcdh10E9PXQ7 1057 aa19.36■□□□□ 0.69
Use1-202ENSMUST00000110053 Ttbk1Q6PCN3 1308 aa19.34■□□□□ 0.69
Use1-202ENSMUST00000110053 PtprtQ99M80 1454 aa19.34■□□□□ 0.69
Use1-202ENSMUST00000110053 Zeb1Q64318 1117 aa19.32■□□□□ 0.68
Use1-202ENSMUST00000110053 Ythdc2B2RR83 1445 aaKnown RBP19.31■□□□□ 0.68
Use1-202ENSMUST00000110053 Abcc2Q8VI47 1543 aa19.3■□□□□ 0.68
Use1-202ENSMUST00000110053 Dnmt1P13864 1620 aaKnown RBP19.3■□□□□ 0.68
Use1-202ENSMUST00000110053 Abca16E9PWJ7 1678 aa19.3■□□□□ 0.68
Use1-202ENSMUST00000110053 Chd1P40201 1711 aa19.29■□□□□ 0.68
Use1-202ENSMUST00000110053 CadpsQ80TJ1 1355 aa19.29■□□□□ 0.68
Use1-202ENSMUST00000110053 PxdnQ3UQ28 1475 aa19.28■□□□□ 0.68
Use1-202ENSMUST00000110053 TchhA0A0B4J1F9 1599 aa19.27■□□□□ 0.67
Use1-202ENSMUST00000110053 BC005561E9Q5E2 1589 aa19.27■□□□□ 0.67
Use1-202ENSMUST00000110053 Neo1P97798 1493 aa19.26■□□□□ 0.67
Use1-202ENSMUST00000110053 Rapgef2Q8CHG7 1496 aa19.26■□□□□ 0.67
Use1-202ENSMUST00000110053 WizO88286 1684 aaKnown RBP19.26■□□□□ 0.67
Use1-202ENSMUST00000110053 Pprc1Q6NZN1 1644 aa19.25■□□□□ 0.67
Use1-202ENSMUST00000110053 Map3k4O08648 1597 aa19.25■□□□□ 0.67
Use1-202ENSMUST00000110053 Arhgap27A2AB59 869 aa19.23■□□□□ 0.67
Use1-202ENSMUST00000110053 EprsQ8CGC7 1512 aaKnown RBP19.22■□□□□ 0.67
Use1-202ENSMUST00000110053 Soga1E1U8D0 1418 aa19.22■□□□□ 0.67
Use1-202ENSMUST00000110053 Mroh2bQ7M6Y6 1581 aa19.22■□□□□ 0.67
Use1-202ENSMUST00000110053 Adamts12Q811B3 1600 aa19.22■□□□□ 0.67
Use1-202ENSMUST00000110053 Eif4g1Q6NZJ6 1600 aaKnown RBP19.16■□□□□ 0.66
Use1-202ENSMUST00000110053 Npm2Q80W85 207 aa19.16■□□□□ 0.66
Use1-202ENSMUST00000110053 Gm14025A2AP89 1413 aa19.16■□□□□ 0.66
Use1-202ENSMUST00000110053 Setbp1Q9Z180 1582 aa19.14■□□□□ 0.65
Use1-202ENSMUST00000110053 Slx4Q6P1D7 1565 aa19.12■□□□□ 0.65
Use1-202ENSMUST00000110053 Rpap1Q80TE0 1409 aa19.08■□□□□ 0.64
Use1-202ENSMUST00000110053 Carmil1Q6EDY6 1374 aa19.07■□□□□ 0.64
Use1-202ENSMUST00000110053 Arhgef12Q8R4H2 1543 aaKnown RBP19.07■□□□□ 0.64
Use1-202ENSMUST00000110053 AI481877A2ALV5 1481 aa19.07■□□□□ 0.64
Use1-202ENSMUST00000110053 Gm7298A0A0N4SVU1 1476 aa19.04■□□□□ 0.64
Use1-202ENSMUST00000110053 Map3k1P53349 1493 aa19.04■□□□□ 0.64
Use1-202ENSMUST00000110053 Arhgap35Q91YM2 1499 aa19.04■□□□□ 0.64
Use1-202ENSMUST00000110053 Ak9G3UYQ4 1894 aa19.02■□□□□ 0.64
Use1-202ENSMUST00000110053 Ppp1r18Q8BQ30 594 aa19■□□□□ 0.63
Use1-202ENSMUST00000110053 Jph4Q80WT0 628 aa18.99■□□□□ 0.63
Use1-202ENSMUST00000110053 Ifnlr1Q8CGK5 535 aa18.99■□□□□ 0.63
Use1-202ENSMUST00000110053 Abca5Q8K448 1642 aa18.99■□□□□ 0.63
Use1-202ENSMUST00000110053 Gab3Q8BSM5 595 aa18.97■□□□□ 0.63
Use1-202ENSMUST00000110053 Fkbp15Q6P9Q6 1216 aaKnown RBP18.93■□□□□ 0.62
Use1-202ENSMUST00000110053 WrnO09053 1401 aa18.91■□□□□ 0.62
Use1-202ENSMUST00000110053 Polr1aO35134 1717 aaKnown RBP18.91■□□□□ 0.62
Use1-202ENSMUST00000110053 Cux1P53564 1515 aa18.91■□□□□ 0.62
Use1-202ENSMUST00000110053 Clasp1Q80TV8 1535 aaKnown RBP18.87■□□□□ 0.61
Use1-202ENSMUST00000110053 Lrrc9Q8CDN9 1456 aa18.85■□□□□ 0.61
Use1-202ENSMUST00000110053 Rrbp1Q99PL5 1605 aaKnown RBP18.85■□□□□ 0.61
Use1-202ENSMUST00000110053 Clip1Q922J3 1391 aa18.84■□□□□ 0.61
Use1-202ENSMUST00000110053 Ttc37F8VPK0 1563 aa18.84■□□□□ 0.61
Use1-202ENSMUST00000110053 Znf608Q56A10 1511 aa18.84■□□□□ 0.61
Use1-202ENSMUST00000110053 Kdm5bQ80Y84 1544 aa18.84■□□□□ 0.61
Use1-202ENSMUST00000110053 Arid3cA6PWV5 409 aa18.83■□□□□ 0.6
Use1-202ENSMUST00000110053 Cep162Q6ZQ06 1403 aa18.83■□□□□ 0.6
Use1-202ENSMUST00000110053 Mapkbp1Q6NS57 1503 aa18.8■□□□□ 0.6
Use1-202ENSMUST00000110053 AdgbG3UZ78 1657 aa18.79■□□□□ 0.6
Use1-202ENSMUST00000110053 Depdc5P61460 1591 aa18.79■□□□□ 0.6
Use1-202ENSMUST00000110053 Fyco1Q8VDC1 1437 aa18.78■□□□□ 0.6
Use1-202ENSMUST00000110053 Igf1rQ60751 1373 aa18.77■□□□□ 0.6
Use1-202ENSMUST00000110053 Myt1lP97500 1187 aa18.75■□□□□ 0.59
Use1-202ENSMUST00000110053 Wdr7Q920I9 1489 aa18.75■□□□□ 0.59
Use1-202ENSMUST00000110053 Arhgap31A6X8Z5 1425 aa18.74■□□□□ 0.59
Use1-202ENSMUST00000110053 Cul7Q8VE73 1689 aa18.73■□□□□ 0.59
Use1-202ENSMUST00000110053 HrcG5E8J6 738 aa18.73■□□□□ 0.59
Use1-202ENSMUST00000110053 NhsB1AV60 1647 aa18.73■□□□□ 0.59
Use1-202ENSMUST00000110053 Ccdc141E9Q8Q6 1531 aa18.71■□□□□ 0.59
Use1-202ENSMUST00000110053 Zfyve16Q80U44 1528 aa18.7■□□□□ 0.58
Use1-202ENSMUST00000110053 Ankrd26Q811D2 1581 aa18.68■□□□□ 0.58
Use1-202ENSMUST00000110053 Atp10dQ8K2X1 1416 aa18.66■□□□□ 0.58
Use1-202ENSMUST00000110053 Mroh2aD3Z750 1679 aa18.65■□□□□ 0.58
Use1-202ENSMUST00000110053 Arhgef11Q68FM7 1552 aa18.64■□□□□ 0.58
Use1-202ENSMUST00000110053 Fndc1E9Q043 1732 aa18.64■□□□□ 0.57
Use1-202ENSMUST00000110053 Gcc2Q8CHG3 1679 aa18.6■□□□□ 0.57
Use1-202ENSMUST00000110053 Plekhg3Q4VAC9 1341 aa18.6■□□□□ 0.57
Use1-202ENSMUST00000110053 Dnajc5gQ8C632 165 aa18.59■□□□□ 0.57
Use1-202ENSMUST00000110053 Rapgef6Q5NCJ1 1609 aa18.59■□□□□ 0.57
Use1-202ENSMUST00000110053 Plppr3Q7TPB0 716 aa18.57■□□□□ 0.56
Use1-202ENSMUST00000110053 AglF8VPN4 1532 aa18.57■□□□□ 0.56
Use1-202ENSMUST00000110053 BlmO88700 1416 aa18.57■□□□□ 0.56
Use1-202ENSMUST00000110053 Alpk3Q924C5 1678 aa18.55■□□□□ 0.56
Use1-202ENSMUST00000110053 Ncoa2Q61026 1462 aa18.55■□□□□ 0.56
Use1-202ENSMUST00000110053 Fancd2Q80V62 1450 aa18.55■□□□□ 0.56
Use1-202ENSMUST00000110053 Aebp1Q640N1 1128 aa18.55■□□□□ 0.56
Use1-202ENSMUST00000110053 Kif27Q7M6Z4 1394 aa18.54■□□□□ 0.56
Use1-202ENSMUST00000110053 Kiaa1210E9Q0C6 1637 aa18.53■□□□□ 0.56
Use1-202ENSMUST00000110053 Abca8bQ8K440 1620 aa18.53■□□□□ 0.56
Use1-202ENSMUST00000110053 Arap1Q4LDD4 1452 aa18.52■□□□□ 0.56
Use1-202ENSMUST00000110053 Magi1Q6RHR9 1471 aa18.49■□□□□ 0.55
Use1-202ENSMUST00000110053 Lmo7E9PYF4 1699 aaKnown RBP18.47■□□□□ 0.55
Use1-202ENSMUST00000110053 Erich3F6QRE9 1637 aa18.47■□□□□ 0.55
Use1-202ENSMUST00000110053 Setd5Q5XJV7 1441 aa18.47■□□□□ 0.55
Use1-202ENSMUST00000110053 Prex2Q3LAC4 1598 aa18.47■□□□□ 0.55
Use1-202ENSMUST00000110053 A2mQ6GQT1 1474 aa18.46■□□□□ 0.55
Use1-202ENSMUST00000110053 Ap3b1Q9Z1T1 1105 aa18.45■□□□□ 0.54
Use1-202ENSMUST00000110053 Pcf11G3X9Z4 1553 aa18.45■□□□□ 0.54
Use1-202ENSMUST00000110053 Rnf17Q99MV7 1640 aa18.42■□□□□ 0.54
Use1-202ENSMUST00000110053 Ncoa3O09000 1398 aa18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms