RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Tiam1Q60610 1591 aa16.58■□□□□ 0.24
Vps54-202ENSMUST00000109578 Baz1bQ9Z277 1479 aa16.56■□□□□ 0.24
Vps54-202ENSMUST00000109578 Grin2bQ01097 1482 aa16.55■□□□□ 0.24
Vps54-202ENSMUST00000109578 Mroh2bQ7M6Y6 1581 aa16.55■□□□□ 0.24
Vps54-202ENSMUST00000109578 Unc13aQ4KUS2 1712 aa16.52■□□□□ 0.24
Vps54-202ENSMUST00000109578 Ercc6F8VPZ5 1481 aa16.52■□□□□ 0.24
Vps54-202ENSMUST00000109578 Ankrd26Q811D2 1581 aa16.51■□□□□ 0.23
Vps54-202ENSMUST00000109578 Slx4Q6P1D7 1565 aa16.49■□□□□ 0.23
Vps54-202ENSMUST00000109578 NclP09405 707 aaKnown RBP16.48■□□□□ 0.23
Vps54-202ENSMUST00000109578 Pcf11G3X9Z4 1553 aa16.47■□□□□ 0.23
Vps54-202ENSMUST00000109578 Hnrnpul2Q00PI9 745 aaKnown RBP16.47■□□□□ 0.23
Vps54-202ENSMUST00000109578 CenpbP27790 599 aa16.47■□□□□ 0.23
Vps54-202ENSMUST00000109578 TchhA0A0B4J1F9 1599 aa16.45■□□□□ 0.22
Vps54-202ENSMUST00000109578 Erich3F6QRE9 1637 aa16.44■□□□□ 0.22
Vps54-202ENSMUST00000109578 Npm1Q61937 292 aaKnown RBP16.42■□□□□ 0.22
Vps54-202ENSMUST00000109578 SafbD3YXK2 937 aaKnown RBP16.42■□□□□ 0.22
Vps54-202ENSMUST00000109578 Hspa5P20029 655 aaKnown RBP16.42■□□□□ 0.22
Vps54-202ENSMUST00000109578 3425401B19RikD3Z1D3 1412 aa16.41■□□□□ 0.22
Vps54-202ENSMUST00000109578 Cux1P53564 1515 aa16.41■□□□□ 0.22
Vps54-202ENSMUST00000109578 Cux2P70298 1426 aa16.4■□□□□ 0.22
Vps54-202ENSMUST00000109578 Rpap1Q80TE0 1409 aa16.38■□□□□ 0.21
Vps54-202ENSMUST00000109578 Ubl4bQ9CQ84 188 aa16.37■□□□□ 0.21
Vps54-202ENSMUST00000109578 CntlnA2AM05 1397 aa16.37■□□□□ 0.21
Vps54-202ENSMUST00000109578 Carmil1Q6EDY6 1374 aa16.36■□□□□ 0.21
Vps54-202ENSMUST00000109578 Lmo7E9PYF4 1699 aaKnown RBP16.35■□□□□ 0.21
Vps54-202ENSMUST00000109578 Aebp1Q640N1 1128 aa16.32■□□□□ 0.2
Vps54-202ENSMUST00000109578 Efcab5A0JP43 1406 aa16.31■□□□□ 0.2
Vps54-202ENSMUST00000109578 LrpprcQ6PB66 1392 aaKnown RBP16.31■□□□□ 0.2
Vps54-202ENSMUST00000109578 Phldb1Q6PDH0 1371 aaKnown RBP16.31■□□□□ 0.2
Vps54-202ENSMUST00000109578 Ube2uB1AUC4 352 aa16.3■□□□□ 0.2
Vps54-202ENSMUST00000109578 Fyco1Q8VDC1 1437 aa16.29■□□□□ 0.2
Vps54-202ENSMUST00000109578 Tnnt3Q9QZ47 272 aa16.29■□□□□ 0.2
Vps54-202ENSMUST00000109578 Dhx29Q6PGC1 1365 aaKnown RBP16.29■□□□□ 0.2
Vps54-202ENSMUST00000109578 Duox2A2AQ99 1517 aa16.29■□□□□ 0.2
Vps54-202ENSMUST00000109578 Chic2Q9D9G3 165 aa16.27■□□□□ 0.2
Vps54-202ENSMUST00000109578 Fhad1A6PWD2 1420 aa16.27■□□□□ 0.19
Vps54-202ENSMUST00000109578 Urb2E9Q7L1 1524 aaKnown RBP16.27■□□□□ 0.19
Vps54-202ENSMUST00000109578 Znf710Q3U288 666 aa16.26■□□□□ 0.19
Vps54-202ENSMUST00000109578 PogzQ8BZH4 1409 aaKnown RBP16.25■□□□□ 0.19
Vps54-202ENSMUST00000109578 Sin3aQ60520 1274 aaKnown RBP16.25■□□□□ 0.19
Vps54-202ENSMUST00000109578 UacaQ8CGB3 1411 aa16.25■□□□□ 0.19
Vps54-202ENSMUST00000109578 Mia2Q91ZV0 1396 aa16.25■□□□□ 0.19
Vps54-202ENSMUST00000109578 Gm13697A2AK42 830 aa16.23■□□□□ 0.19
Vps54-202ENSMUST00000109578 Ccer2J3QPU5 274 aa16.23■□□□□ 0.19
Vps54-202ENSMUST00000109578 Gm1043A0A140LJC2 1431 aa16.23■□□□□ 0.19
Vps54-202ENSMUST00000109578 Gm7298A0A0N4SVU1 1476 aa16.23■□□□□ 0.19
Vps54-202ENSMUST00000109578 Naip2Q9QUK4 1447 aa16.22■□□□□ 0.19
Vps54-202ENSMUST00000109578 Ankrd36D3Z4K0 1415 aa16.21■□□□□ 0.19
Vps54-202ENSMUST00000109578 Vps8Q0P5W1 1427 aa16.21■□□□□ 0.19
Vps54-202ENSMUST00000109578 Rad54l2Q99NG0 1466 aa16.21■□□□□ 0.18
Vps54-202ENSMUST00000109578 Fam71e1A1L3C1 212 aa16.19■□□□□ 0.18
Vps54-202ENSMUST00000109578 Slc24a1Q91WD8 1130 aa16.17■□□□□ 0.18
Vps54-202ENSMUST00000109578 A2mQ6GQT1 1474 aa16.17■□□□□ 0.18
Vps54-202ENSMUST00000109578 Samd9lQ69Z37 1561 aa16.17■□□□□ 0.18
Vps54-202ENSMUST00000109578 Peg3Q3URU2 1571 aa16.16■□□□□ 0.18
Vps54-202ENSMUST00000109578 SynmQ70IV5 1561 aa16.16■□□□□ 0.18
Vps54-202ENSMUST00000109578 Ccnb3Q810T2 1396 aa16.15■□□□□ 0.18
Vps54-202ENSMUST00000109578 Stra8P70278 393 aa16.15■□□□□ 0.18
Vps54-202ENSMUST00000109578 Dennd4bQ3U1Y4 1499 aa16.11■□□□□ 0.17
Vps54-202ENSMUST00000109578 Crocc2F6XLV1 1638 aa16.1■□□□□ 0.17
Vps54-202ENSMUST00000109578 Thoc2B1AZI6 1594 aaKnown RBP16.1■□□□□ 0.17
Vps54-202ENSMUST00000109578 Naip5Q9R016 1403 aa16.09■□□□□ 0.17
Vps54-202ENSMUST00000109578 Polr1aO35134 1717 aaKnown RBP16.06■□□□□ 0.16
Vps54-202ENSMUST00000109578 Myt1Q8CFC2 1127 aa16.05■□□□□ 0.16
Vps54-202ENSMUST00000109578 Smg6P61406 1418 aaKnown RBP16.05■□□□□ 0.16
Vps54-202ENSMUST00000109578 Mphosph9A6H5Y1 991 aa16.04■□□□□ 0.16
Vps54-202ENSMUST00000109578 EprsQ8CGC7 1512 aaKnown RBP16.04■□□□□ 0.16
Vps54-202ENSMUST00000109578 Kif27Q7M6Z4 1394 aa16.03■□□□□ 0.16
Vps54-202ENSMUST00000109578 Gpatch8A2A6A1 1505 aa16.03■□□□□ 0.16
Vps54-202ENSMUST00000109578 Calr4Q3TQS0 420 aa16.02■□□□□ 0.16
Vps54-202ENSMUST00000109578 CadpsQ80TJ1 1355 aa16.02■□□□□ 0.15
Vps54-202ENSMUST00000109578 Ncoa2Q61026 1462 aa16.01■□□□□ 0.15
Vps54-202ENSMUST00000109578 Zfp644E9QA22 1323 aa16.01■□□□□ 0.15
Vps54-202ENSMUST00000109578 Cabp1Q9JLK7 227 aa16■□□□□ 0.15
Vps54-202ENSMUST00000109578 Lmtk2Q3TYD6 1471 aa15.99■□□□□ 0.15
Vps54-202ENSMUST00000109578 Pla2r1Q62028 1487 aa15.99■□□□□ 0.15
Vps54-202ENSMUST00000109578 Camsap2Q8C1B1 1461 aa15.99■□□□□ 0.15
Vps54-202ENSMUST00000109578 Fam135aQ6NS59 1506 aa15.97■□□□□ 0.15
Vps54-202ENSMUST00000109578 Anp32aO35381 247 aa15.97■□□□□ 0.15
Vps54-202ENSMUST00000109578 NexmifQ5DTT1 1515 aa15.96■□□□□ 0.15
Vps54-202ENSMUST00000109578 Nolc1E9Q5C9 702 aaKnown RBP15.96■□□□□ 0.14
Vps54-202ENSMUST00000109578 Eif5bQ05D44 1216 aaKnown RBP15.96■□□□□ 0.14
Vps54-202ENSMUST00000109578 BC005561E9Q5E2 1589 aa15.95■□□□□ 0.14
Vps54-202ENSMUST00000109578 Cul7Q8VE73 1689 aa15.95■□□□□ 0.14
Vps54-202ENSMUST00000109578 Pkd2O35245 966 aa15.94■□□□□ 0.14
Vps54-202ENSMUST00000109578 Mrs2Q5NCE8 434 aa15.92■□□□□ 0.14
Vps54-202ENSMUST00000109578 Magi3Q9EQJ9 1476 aa15.92■□□□□ 0.14
Vps54-202ENSMUST00000109578 Wwc2Q6NXJ0 1187 aa15.91■□□□□ 0.14
Vps54-202ENSMUST00000109578 Usp47Q8BY87 1376 aa15.91■□□□□ 0.14
Vps54-202ENSMUST00000109578 Abca5Q8K448 1642 aa15.9■□□□□ 0.14
Vps54-202ENSMUST00000109578 Kif21aQ9QXL2 1672 aa15.88■□□□□ 0.13
Vps54-202ENSMUST00000109578 Grin2aP35436 1464 aa15.88■□□□□ 0.13
Vps54-202ENSMUST00000109578 WizO88286 1684 aaKnown RBP15.88■□□□□ 0.13
Vps54-202ENSMUST00000109578 Mug1P28665 1476 aa15.87■□□□□ 0.13
Vps54-202ENSMUST00000109578 Fhod3Q76LL6 1578 aa15.87■□□□□ 0.13
Vps54-202ENSMUST00000109578 Slc4a2P13808 1237 aaKnown RBP15.87■□□□□ 0.13
Vps54-202ENSMUST00000109578 P3h3Q8CG70 732 aa15.87■□□□□ 0.13
Vps54-202ENSMUST00000109578 Abcc5Q9R1X5 1436 aa15.87■□□□□ 0.13
Vps54-202ENSMUST00000109578 Ift140E9PY46 1464 aa15.86■□□□□ 0.13
Vps54-202ENSMUST00000109578 Pprc1Q6NZN1 1644 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms