RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Hsp90ab1P11499 724 aaKnown RBP14.11□□□□□ -0.15
Vcan-202ENSMUST00000109544 Fgd1P52734 960 aa14.08□□□□□ -0.15
Vcan-202ENSMUST00000109544 Rad21Q61550 635 aaKnown RBP14.08□□□□□ -0.16
Vcan-202ENSMUST00000109544 Adam1bQ8R534 806 aa14.06□□□□□ -0.16
Vcan-202ENSMUST00000109544 PtmaP26350 111 aa14.05□□□□□ -0.16
Vcan-202ENSMUST00000109544 Ppm1gQ61074 542 aa14.04□□□□□ -0.16
Vcan-202ENSMUST00000109544 Trim30dE9PWL0 497 aa14.02□□□□□ -0.17
Vcan-202ENSMUST00000109544 Chmp4bQ9D8B3 224 aaKnown RBP13.98□□□□□ -0.17
Vcan-202ENSMUST00000109544 Vsig10D3YX43 558 aa13.97□□□□□ -0.17
Vcan-202ENSMUST00000109544 Fam71e1A1L3C1 212 aa13.95□□□□□ -0.18
Vcan-202ENSMUST00000109544 Ifnlr1Q8CGK5 535 aa13.95□□□□□ -0.18
Vcan-202ENSMUST00000109544 1700123L14RikQ3V2K7 440 aa13.95□□□□□ -0.18
Vcan-202ENSMUST00000109544 Ofd1Q80Z25 1017 aa13.94□□□□□ -0.18
Vcan-202ENSMUST00000109544 Plcb2A3KGF7 1181 aa13.93□□□□□ -0.18
Vcan-202ENSMUST00000109544 Irx3P81067 507 aa13.92□□□□□ -0.18
Vcan-202ENSMUST00000109544 Rangap1P46061 589 aaKnown RBP13.92□□□□□ -0.18
Vcan-202ENSMUST00000109544 Map7O88735 730 aa13.91□□□□□ -0.18
Vcan-202ENSMUST00000109544 BlmO88700 1416 aa13.91□□□□□ -0.18
Vcan-202ENSMUST00000109544 Mbd3Q9Z2D8 285 aaKnown RBP13.9□□□□□ -0.18
Vcan-202ENSMUST00000109544 Cwc22Q8C5N3 908 aaKnown RBP13.89□□□□□ -0.19
Vcan-202ENSMUST00000109544 AU015836B2RUM3 263 aa13.88□□□□□ -0.19
Vcan-202ENSMUST00000109544 Casc1Q6TDU8 730 aa13.87□□□□□ -0.19
Vcan-202ENSMUST00000109544 Chic2Q9D9G3 165 aa13.87□□□□□ -0.19
Vcan-202ENSMUST00000109544 Zfp777B9EKF4 885 aa13.86□□□□□ -0.19
Vcan-202ENSMUST00000109544 Fkbp15Q6P9Q6 1216 aaKnown RBP13.85□□□□□ -0.19
Vcan-202ENSMUST00000109544 Tnnt2P50752 301 aa13.85□□□□□ -0.19
Vcan-202ENSMUST00000109544 PtmsQ9D0J8 101 aaKnown RBP13.85□□□□□ -0.19
Vcan-202ENSMUST00000109544 PnnO35691 725 aaKnown RBP13.84□□□□□ -0.19
Vcan-202ENSMUST00000109544 Znf326O88291 580 aa13.82□□□□□ -0.2
Vcan-202ENSMUST00000109544 Calcoco2A2A6M5 331 aa13.81□□□□□ -0.2
Vcan-202ENSMUST00000109544 Bcl11aQ9QYE3 773 aa13.8□□□□□ -0.2
Vcan-202ENSMUST00000109544 Gm973E9Q295 1059 aa13.79□□□□□ -0.2
Vcan-202ENSMUST00000109544 Trim26Q99PN3 545 aa13.79□□□□□ -0.2
Vcan-202ENSMUST00000109544 NudcO35685 332 aaKnown RBP13.79□□□□□ -0.2
Vcan-202ENSMUST00000109544 Setd5Q5XJV7 1441 aa13.79□□□□□ -0.2
Vcan-202ENSMUST00000109544 IqubQ8CDK3 788 aa13.79□□□□□ -0.2
Vcan-202ENSMUST00000109544 Abcc8B2RUS7 1588 aa13.78□□□□□ -0.2
Vcan-202ENSMUST00000109544 KnstrnQ9D9Z1 312 aaKnown RBP13.77□□□□□ -0.21
Vcan-202ENSMUST00000109544 Mapk8ip3Q9ESN9 1337 aa13.77□□□□□ -0.21
Vcan-202ENSMUST00000109544 Rgl3Q3UYI5 709 aa13.76□□□□□ -0.21
Vcan-202ENSMUST00000109544 MccE9PWI3 1003 aa13.74□□□□□ -0.21
Vcan-202ENSMUST00000109544 Iqcf3Q9D498 203 aa13.73□□□□□ -0.21
Vcan-202ENSMUST00000109544 Tcerg1Q8CGF7 1100 aaKnown RBP13.73□□□□□ -0.21
Vcan-202ENSMUST00000109544 Card11Q8CIS0 1159 aa13.72□□□□□ -0.21
Vcan-202ENSMUST00000109544 Arid4bA2CG63 1314 aaKnown RBP13.72□□□□□ -0.21
Vcan-202ENSMUST00000109544 MsnP26041 577 aaKnown RBP13.71□□□□□ -0.21
Vcan-202ENSMUST00000109544 Wwc2Q6NXJ0 1187 aa13.71□□□□□ -0.21
Vcan-202ENSMUST00000109544 Pes1Q9EQ61 584 aaKnown RBP13.7□□□□□ -0.22
Vcan-202ENSMUST00000109544 HnrnpuQ8VEK3 800 aaKnown RBP13.69□□□□□ -0.22
Vcan-202ENSMUST00000109544 Aebp2Q9Z248 504 aaKnown RBP13.69□□□□□ -0.22
Vcan-202ENSMUST00000109544 Srpk2O54781 681 aaKnown RBP13.68□□□□□ -0.22
Vcan-202ENSMUST00000109544 P3h3Q8CG70 732 aa13.68□□□□□ -0.22
Vcan-202ENSMUST00000109544 Dnttip2Q8R2M2 758 aaKnown RBP13.67□□□□□ -0.22
Vcan-202ENSMUST00000109544 Mia2Q91ZV0 1396 aa13.67□□□□□ -0.22
Vcan-202ENSMUST00000109544 Pde3bQ61409 1100 aa13.67□□□□□ -0.22
Vcan-202ENSMUST00000109544 Rwdd1Q9CQK7 243 aa13.66□□□□□ -0.22
Vcan-202ENSMUST00000109544 4933402E13RikQ9D4D2 429 aa13.66□□□□□ -0.22
Vcan-202ENSMUST00000109544 Ubl4bQ9CQ84 188 aa13.65□□□□□ -0.22
Vcan-202ENSMUST00000109544 Eea1Q8BL66 1411 aa13.65□□□□□ -0.22
Vcan-202ENSMUST00000109544 Rrp12Q6P5B0 1295 aaKnown RBP13.65□□□□□ -0.22
Vcan-202ENSMUST00000109544 Safb2Q80YR5 991 aaKnown RBP13.65□□□□□ -0.22
Vcan-202ENSMUST00000109544 Mak16Q8BGS0 296 aaKnown RBP13.64□□□□□ -0.23
Vcan-202ENSMUST00000109544 Dnai1Q8C0M8 701 aa13.64□□□□□ -0.23
Vcan-202ENSMUST00000109544 Erich6bQ9D4S6 220 aa13.64□□□□□ -0.23
Vcan-202ENSMUST00000109544 Exosc9Q9JHI7 438 aaKnown RBP13.64□□□□□ -0.23
Vcan-202ENSMUST00000109544 Hsp90b1P08113 802 aaKnown RBP13.64□□□□□ -0.23
Vcan-202ENSMUST00000109544 Gm6268A2A3U9 297 aa13.63□□□□□ -0.23
Vcan-202ENSMUST00000109544 Apbb1Q9QXJ1 710 aa13.63□□□□□ -0.23
Vcan-202ENSMUST00000109544 Mroh3A0A1D5RM54 893 aa13.63□□□□□ -0.23
Vcan-202ENSMUST00000109544 Neurod2Q62414 383 aa13.61□□□□□ -0.23
Vcan-202ENSMUST00000109544 Gm20521D3Z5F7 333 aa13.61□□□□□ -0.23
Vcan-202ENSMUST00000109544 Ipo9Q91YE6 1041 aa13.61□□□□□ -0.23
Vcan-202ENSMUST00000109544 Rb1cc1Q9ESK9 1588 aa13.6□□□□□ -0.23
Vcan-202ENSMUST00000109544 SetQ9EQU5 289 aaKnown RBP13.6□□□□□ -0.23
Vcan-202ENSMUST00000109544 EspnQ9ET47 871 aa13.59□□□□□ -0.23
Vcan-202ENSMUST00000109544 Znf316Q6PGE4 1016 aa13.59□□□□□ -0.23
Vcan-202ENSMUST00000109544 Ddrgk1Q80WW9 315 aa13.59□□□□□ -0.23
Vcan-202ENSMUST00000109544 RdxP26043 583 aaKnown RBP13.59□□□□□ -0.23
Vcan-202ENSMUST00000109544 Dbr1Q923B1 550 aa13.58□□□□□ -0.24
Vcan-202ENSMUST00000109544 Map7d2A2AG50 781 aa13.57□□□□□ -0.24
Vcan-202ENSMUST00000109544 Grwd1Q810D6 446 aaKnown RBP13.57□□□□□ -0.24
Vcan-202ENSMUST00000109544 Chmp5Q9D7S9 219 aa13.57□□□□□ -0.24
Vcan-202ENSMUST00000109544 Spryd3E9Q9B3 442 aa13.56□□□□□ -0.24
Vcan-202ENSMUST00000109544 Kdm2aP59997 1161 aa13.56□□□□□ -0.24
Vcan-202ENSMUST00000109544 B4galnt3Q6L8S8 986 aa13.55□□□□□ -0.24
Vcan-202ENSMUST00000109544 Sart3Q9JLI8 962 aaKnown RBP13.55□□□□□ -0.24
Vcan-202ENSMUST00000109544 Cald1E9QA15 768 aaKnown RBP13.55□□□□□ -0.24
Vcan-202ENSMUST00000109544 Supt16hQ920B9 1047 aa13.55□□□□□ -0.24
Vcan-202ENSMUST00000109544 Mtus2Q3UHD3 1353 aa13.55□□□□□ -0.24
Vcan-202ENSMUST00000109544 Golga3P55937 1487 aa13.54□□□□□ -0.24
Vcan-202ENSMUST00000109544 Irx6Q9ER75 438 aa13.53□□□□□ -0.24
Vcan-202ENSMUST00000109544 R3hcc1Q8BSI6 488 aa13.53□□□□□ -0.24
Vcan-202ENSMUST00000109544 Eif4g2Q62448 906 aaKnown RBP13.53□□□□□ -0.24
Vcan-202ENSMUST00000109544 Ipo8Q7TMY7 1010 aa13.51□□□□□ -0.25
Vcan-202ENSMUST00000109544 Smarce1O54941 411 aaKnown RBP13.51□□□□□ -0.25
Vcan-202ENSMUST00000109544 Sh3bp5Q9Z131 463 aa13.51□□□□□ -0.25
Vcan-202ENSMUST00000109544 Fhad1A6PWD2 1420 aa13.51□□□□□ -0.25
Vcan-202ENSMUST00000109544 Cspp1B2RX88 1205 aa13.5□□□□□ -0.25
Vcan-202ENSMUST00000109544 Tpm3-rs7D3Z2H9 248 aa13.5□□□□□ -0.25
Vcan-202ENSMUST00000109544 Rsf1E9PWW9 1441 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms