RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Cdk11bP24788 784 aaKnown RBP17■□□□□ 0.31
Trim11-202ENSMUST00000108809 1700123L14RikQ3V2K7 440 aa16.96■□□□□ 0.31
Trim11-202ENSMUST00000108809 Ap3b1Q9Z1T1 1105 aa16.96■□□□□ 0.31
Trim11-202ENSMUST00000108809 Thoc2B1AZI6 1594 aaKnown RBP16.96■□□□□ 0.31
Trim11-202ENSMUST00000108809 Ppargc1bQ8VHJ7 1014 aa16.93■□□□□ 0.3
Trim11-202ENSMUST00000108809 Peg3Q3URU2 1571 aa16.93■□□□□ 0.3
Trim11-202ENSMUST00000108809 Cux1P53564 1515 aa16.92■□□□□ 0.3
Trim11-202ENSMUST00000108809 Csrnp3P59055 597 aa16.91■□□□□ 0.3
Trim11-202ENSMUST00000108809 Phldb1Q6PDH0 1371 aaKnown RBP16.91■□□□□ 0.3
Trim11-202ENSMUST00000108809 Efcab5A0JP43 1406 aa16.91■□□□□ 0.3
Trim11-202ENSMUST00000108809 BlmO88700 1416 aa16.89■□□□□ 0.29
Trim11-202ENSMUST00000108809 Carmil1Q6EDY6 1374 aa16.88■□□□□ 0.29
Trim11-202ENSMUST00000108809 Cux2P70298 1426 aa16.88■□□□□ 0.29
Trim11-202ENSMUST00000108809 Urb2E9Q7L1 1524 aaKnown RBP16.87■□□□□ 0.29
Trim11-202ENSMUST00000108809 CntlnA2AM05 1397 aa16.85■□□□□ 0.29
Trim11-202ENSMUST00000108809 PogzQ8BZH4 1409 aaKnown RBP16.84■□□□□ 0.29
Trim11-202ENSMUST00000108809 3425401B19RikD3Z1D3 1412 aa16.84■□□□□ 0.29
Trim11-202ENSMUST00000108809 Eid3Q3V124 375 aa16.84■□□□□ 0.29
Trim11-202ENSMUST00000108809 Duox2A2AQ99 1517 aa16.82■□□□□ 0.28
Trim11-202ENSMUST00000108809 Fam135aQ6NS59 1506 aa16.81■□□□□ 0.28
Trim11-202ENSMUST00000108809 LrpprcQ6PB66 1392 aaKnown RBP16.81■□□□□ 0.28
Trim11-202ENSMUST00000108809 SynmQ70IV5 1561 aa16.8■□□□□ 0.28
Trim11-202ENSMUST00000108809 Samd9lQ69Z37 1561 aa16.78■□□□□ 0.28
Trim11-202ENSMUST00000108809 Fyco1Q8VDC1 1437 aa16.76■□□□□ 0.27
Trim11-202ENSMUST00000108809 Fhad1A6PWD2 1420 aa16.76■□□□□ 0.27
Trim11-202ENSMUST00000108809 Gm1043A0A140LJC2 1431 aa16.75■□□□□ 0.27
Trim11-202ENSMUST00000108809 UacaQ8CGB3 1411 aa16.74■□□□□ 0.27
Trim11-202ENSMUST00000108809 Polr1aO35134 1717 aaKnown RBP16.74■□□□□ 0.27
Trim11-202ENSMUST00000108809 Ankrd36D3Z4K0 1415 aa16.73■□□□□ 0.27
Trim11-202ENSMUST00000108809 Aplp2Q06335 707 aa16.73■□□□□ 0.27
Trim11-202ENSMUST00000108809 Crocc2F6XLV1 1638 aa16.73■□□□□ 0.27
Trim11-202ENSMUST00000108809 Vps8Q0P5W1 1427 aa16.71■□□□□ 0.27
Trim11-202ENSMUST00000108809 Npm1Q61937 292 aaKnown RBP16.71■□□□□ 0.27
Trim11-202ENSMUST00000108809 Gm7298A0A0N4SVU1 1476 aa16.69■□□□□ 0.26
Trim11-202ENSMUST00000108809 Mia2Q91ZV0 1396 aa16.69■□□□□ 0.26
Trim11-202ENSMUST00000108809 Naip2Q9QUK4 1447 aa16.69■□□□□ 0.26
Trim11-202ENSMUST00000108809 Ubl4bQ9CQ84 188 aa16.69■□□□□ 0.26
Trim11-202ENSMUST00000108809 Rpap1Q80TE0 1409 aa16.67■□□□□ 0.26
Trim11-202ENSMUST00000108809 Dhx29Q6PGC1 1365 aaKnown RBP16.67■□□□□ 0.26
Trim11-202ENSMUST00000108809 Lmod2Q3UHZ5 550 aa16.65■□□□□ 0.26
Trim11-202ENSMUST00000108809 Aebp1Q640N1 1128 aa16.64■□□□□ 0.25
Trim11-202ENSMUST00000108809 Fam50aQ9WV03 339 aaKnown RBP16.64■□□□□ 0.25
Trim11-202ENSMUST00000108809 Cul7Q8VE73 1689 aa16.63■□□□□ 0.25
Trim11-202ENSMUST00000108809 Kif21aQ9QXL2 1672 aa16.63■□□□□ 0.25
Trim11-202ENSMUST00000108809 Dennd4bQ3U1Y4 1499 aa16.62■□□□□ 0.25
Trim11-202ENSMUST00000108809 Ccer2J3QPU5 274 aa16.62■□□□□ 0.25
Trim11-202ENSMUST00000108809 Lmtk2Q3TYD6 1471 aa16.62■□□□□ 0.25
Trim11-202ENSMUST00000108809 A2mQ6GQT1 1474 aa16.62■□□□□ 0.25
Trim11-202ENSMUST00000108809 Camsap2Q8C1B1 1461 aa16.62■□□□□ 0.25
Trim11-202ENSMUST00000108809 Rad54l2Q99NG0 1466 aa16.61■□□□□ 0.25
Trim11-202ENSMUST00000108809 Fhod3Q76LL6 1578 aa16.61■□□□□ 0.25
Trim11-202ENSMUST00000108809 Abca5Q8K448 1642 aa16.61■□□□□ 0.25
Trim11-202ENSMUST00000108809 CenpbP27790 599 aa16.59■□□□□ 0.25
Trim11-202ENSMUST00000108809 Pla2r1Q62028 1487 aa16.58■□□□□ 0.24
Trim11-202ENSMUST00000108809 EprsQ8CGC7 1512 aaKnown RBP16.57■□□□□ 0.24
Trim11-202ENSMUST00000108809 Gcc2Q8CHG3 1679 aa16.56■□□□□ 0.24
Trim11-202ENSMUST00000108809 Hspa5P20029 655 aaKnown RBP16.55■□□□□ 0.24
Trim11-202ENSMUST00000108809 Gpatch8A2A6A1 1505 aa16.54■□□□□ 0.24
Trim11-202ENSMUST00000108809 Magi3Q9EQJ9 1476 aa16.53■□□□□ 0.24
Trim11-202ENSMUST00000108809 Gm13697A2AK42 830 aa16.53■□□□□ 0.24
Trim11-202ENSMUST00000108809 NclP09405 707 aaKnown RBP16.52■□□□□ 0.23
Trim11-202ENSMUST00000108809 Naip5Q9R016 1403 aa16.51■□□□□ 0.23
Trim11-202ENSMUST00000108809 Ccnb3Q810T2 1396 aa16.5■□□□□ 0.23
Trim11-202ENSMUST00000108809 CadpsQ80TJ1 1355 aa16.5■□□□□ 0.23
Trim11-202ENSMUST00000108809 Myt1Q8CFC2 1127 aa16.49■□□□□ 0.23
Trim11-202ENSMUST00000108809 Gm38655A0A286YDK6 273 aa16.49■□□□□ 0.23
Trim11-202ENSMUST00000108809 Setbp1Q9Z180 1582 aa16.48■□□□□ 0.23
Trim11-202ENSMUST00000108809 Ncoa2Q61026 1462 aa16.48■□□□□ 0.23
Trim11-202ENSMUST00000108809 Adamts12Q811B3 1600 aa16.47■□□□□ 0.23
Trim11-202ENSMUST00000108809 Hnrnpul2Q00PI9 745 aaKnown RBP16.46■□□□□ 0.23
Trim11-202ENSMUST00000108809 Tnnt3Q9QZ47 272 aa16.46■□□□□ 0.23
Trim11-202ENSMUST00000108809 NexmifQ5DTT1 1515 aa16.45■□□□□ 0.22
Trim11-202ENSMUST00000108809 BC005561E9Q5E2 1589 aa16.45■□□□□ 0.22
Trim11-202ENSMUST00000108809 WizO88286 1684 aaKnown RBP16.44■□□□□ 0.22
Trim11-202ENSMUST00000108809 Mapk8ip2Q9ERE9 830 aa16.44■□□□□ 0.22
Trim11-202ENSMUST00000108809 Grin2aP35436 1464 aa16.44■□□□□ 0.22
Trim11-202ENSMUST00000108809 Znf710Q3U288 666 aa16.43■□□□□ 0.22
Trim11-202ENSMUST00000108809 Pprc1Q6NZN1 1644 aa16.42■□□□□ 0.22
Trim11-202ENSMUST00000108809 Rfx7F8VPJ6 1459 aa16.41■□□□□ 0.22
Trim11-202ENSMUST00000108809 Kif27Q7M6Z4 1394 aa16.4■□□□□ 0.22
Trim11-202ENSMUST00000108809 Soga1E1U8D0 1418 aa16.4■□□□□ 0.22
Trim11-202ENSMUST00000108809 Setd1bQ8CFT2 1985 aa16.39■□□□□ 0.22
Trim11-202ENSMUST00000108809 Mrc2Q64449 1479 aa16.39■□□□□ 0.21
Trim11-202ENSMUST00000108809 Disp1Q3TDN0 1521 aa16.38■□□□□ 0.21
Trim11-202ENSMUST00000108809 Abca16E9PWJ7 1678 aa16.36■□□□□ 0.21
Trim11-202ENSMUST00000108809 Chic2Q9D9G3 165 aa16.34■□□□□ 0.21
Trim11-202ENSMUST00000108809 Plb1Q3TTY0 1478 aa16.34■□□□□ 0.21
Trim11-202ENSMUST00000108809 PxdnQ3UQ28 1475 aa16.34■□□□□ 0.21
Trim11-202ENSMUST00000108809 Stra8P70278 393 aa16.33■□□□□ 0.21
Trim11-202ENSMUST00000108809 Mug1P28665 1476 aa16.33■□□□□ 0.21
Trim11-202ENSMUST00000108809 Smg6P61406 1418 aaKnown RBP16.33■□□□□ 0.2
Trim11-202ENSMUST00000108809 SafbD3YXK2 937 aaKnown RBP16.31■□□□□ 0.2
Trim11-202ENSMUST00000108809 Kif21bQ9QXL1 1668 aa16.3■□□□□ 0.2
Trim11-202ENSMUST00000108809 Dnajc5bQ9CQ94 199 aa16.3■□□□□ 0.2
Trim11-202ENSMUST00000108809 Ift140E9PY46 1464 aa16.3■□□□□ 0.2
Trim11-202ENSMUST00000108809 Mphosph9A6H5Y1 991 aa16.29■□□□□ 0.2
Trim11-202ENSMUST00000108809 Lamc1P02468 1607 aaKnown RBP16.29■□□□□ 0.2
Trim11-202ENSMUST00000108809 Sin3aQ60520 1274 aaKnown RBP16.29■□□□□ 0.2
Trim11-202ENSMUST00000108809 Pbrm1Q8BSQ9 1634 aaKnown RBP16.29■□□□□ 0.2
Trim11-202ENSMUST00000108809 Abcc5Q9R1X5 1436 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms