RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Lmo7E9PYF4 1699 aaKnown RBP16.33■□□□□ 0.21
Ttc39a-202ENSMUST00000106618 Ap3b1Q9Z1T1 1105 aa16.33■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Tiam1Q60610 1591 aa16.33■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Pcf11G3X9Z4 1553 aa16.32■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Plb1Q3TTY0 1478 aa16.31■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Urb2E9Q7L1 1524 aaKnown RBP16.29■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 NefmP08553 848 aa16.29■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Polr1aO35134 1717 aaKnown RBP16.29■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Pla2r1Q62028 1487 aa16.28■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Magi3Q9EQJ9 1476 aa16.28■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Naip1Q9QWK5 1403 aa16.27■□□□□ 0.2
Ttc39a-202ENSMUST00000106618 Ncapd3Q6ZQK0 1506 aa16.27■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 Fyco1Q8VDC1 1437 aa16.25■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 Disp1Q3TDN0 1521 aa16.25■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 Setd1bQ8CFT2 1985 aa16.25■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 Rpap1Q80TE0 1409 aa16.24■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 Slx4Q6P1D7 1565 aa16.24■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 EprsQ8CGC7 1512 aaKnown RBP16.22■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 Grin2aP35436 1464 aa16.22■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 CntlnA2AM05 1397 aa16.21■□□□□ 0.19
Ttc39a-202ENSMUST00000106618 Peg3Q3URU2 1571 aa16.19■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 Lrriq1Q0P5X1 1673 aa16.19■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 BlmO88700 1416 aa16.18■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 Gpatch8A2A6A1 1505 aa16.18■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 Ift140E9PY46 1464 aa16.17■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 Pbrm1Q8BSQ9 1634 aaKnown RBP16.15■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 Abca5Q8K448 1642 aa16.15■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 Aebp1Q640N1 1128 aa16.15■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 CadpsQ80TJ1 1355 aa16.14■□□□□ 0.18
Ttc39a-202ENSMUST00000106618 Adamts12Q811B3 1600 aa16.14■□□□□ 0.17
Ttc39a-202ENSMUST00000106618 Nup160Q9Z0W3 1402 aaKnown RBP16.14■□□□□ 0.17
Ttc39a-202ENSMUST00000106618 WizO88286 1684 aaKnown RBP16.13■□□□□ 0.17
Ttc39a-202ENSMUST00000106618 Gm7298A0A0N4SVU1 1476 aa16.12■□□□□ 0.17
Ttc39a-202ENSMUST00000106618 Gm1043A0A140LJC2 1431 aa16.09■□□□□ 0.17
Ttc39a-202ENSMUST00000106618 TchhA0A0B4J1F9 1599 aa16.08■□□□□ 0.16
Ttc39a-202ENSMUST00000106618 Abca16E9PWJ7 1678 aa16.06■□□□□ 0.16
Ttc39a-202ENSMUST00000106618 Kdm5bQ80Y84 1544 aa16.06■□□□□ 0.16
Ttc39a-202ENSMUST00000106618 Lmod2Q3UHZ5 550 aa16.06■□□□□ 0.16
Ttc39a-202ENSMUST00000106618 PxdnQ3UQ28 1475 aa16.06■□□□□ 0.16
Ttc39a-202ENSMUST00000106618 Soga1E1U8D0 1418 aa16.06■□□□□ 0.16
Ttc39a-202ENSMUST00000106618 Cc2d2bA0A286YDU8 1405 aa16.02■□□□□ 0.15
Ttc39a-202ENSMUST00000106618 Pcgf6Q99NA9 353 aa16■□□□□ 0.15
Ttc39a-202ENSMUST00000106618 3425401B19RikD3Z1D3 1412 aa16■□□□□ 0.15
Ttc39a-202ENSMUST00000106618 Abcc2Q8VI47 1543 aa15.98■□□□□ 0.15
Ttc39a-202ENSMUST00000106618 Kif27Q7M6Z4 1394 aa15.97■□□□□ 0.15
Ttc39a-202ENSMUST00000106618 Rusc2Q80U22 1514 aa15.94■□□□□ 0.14
Ttc39a-202ENSMUST00000106618 Lmtk2Q3TYD6 1471 aa15.94■□□□□ 0.14
Ttc39a-202ENSMUST00000106618 Supt5hO55201 1082 aaKnown RBP15.94■□□□□ 0.14
Ttc39a-202ENSMUST00000106618 Eif4g3Q80XI3 1579 aaKnown RBP15.93■□□□□ 0.14
Ttc39a-202ENSMUST00000106618 WrnO09053 1401 aa15.92■□□□□ 0.14
Ttc39a-202ENSMUST00000106618 Shroom2A2ALU4 1481 aa15.9■□□□□ 0.14
Ttc39a-202ENSMUST00000106618 BC005561E9Q5E2 1589 aa15.9■□□□□ 0.14
Ttc39a-202ENSMUST00000106618 Arhgap27A2AB59 869 aa15.89■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Ccnb3Q810T2 1396 aa15.88■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Gcc2Q8CHG3 1679 aa15.88■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 NexmifQ5DTT1 1515 aa15.87■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Rapgef6Q5NCJ1 1609 aa15.87■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Naip2Q9QUK4 1447 aa15.85■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 A2mQ6GQT1 1474 aa15.85■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 TonslQ6NZL6 1363 aa15.85■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Map3k4O08648 1597 aa15.84■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Las1lA2BE28 776 aaKnown RBP15.84■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Fam50aQ9WV03 339 aaKnown RBP15.84■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Fhad1A6PWD2 1420 aa15.83■□□□□ 0.13
Ttc39a-202ENSMUST00000106618 Ncoa3O09000 1398 aa15.82■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Mia2Q91ZV0 1396 aa15.82■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Mug1P28665 1476 aa15.82■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Dnmt1P13864 1620 aaKnown RBP15.81■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Arhgef11Q68FM7 1552 aa15.8■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Vps8Q0P5W1 1427 aa15.8■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Zcchc11B2RX14 1644 aaKnown RBP15.79■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Cdc42bpaQ3UU96 1719 aa15.78■□□□□ 0.12
Ttc39a-202ENSMUST00000106618 Eid3Q3V124 375 aa15.76■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Arhgap31A6X8Z5 1425 aa15.76■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Sall2Q9QX96 1004 aa15.75■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Kiaa1551Q5DTW7 1521 aa15.74■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Aebp2Q9Z248 504 aaKnown RBP15.74■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Dennd4bQ3U1Y4 1499 aa15.73■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Mroh2aD3Z750 1679 aa15.72■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Neo1P97798 1493 aa15.72■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Ncoa2Q61026 1462 aa15.72■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Ccdc141E9Q8Q6 1531 aa15.72■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Fgd6Q69ZL1 1399 aa15.71■□□□□ 0.11
Ttc39a-202ENSMUST00000106618 Ccer2J3QPU5 274 aa15.71■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 UacaQ8CGB3 1411 aa15.71■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Arhgef40Q3UPH7 1517 aa15.7■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Magi1Q6RHR9 1471 aa15.69■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Arhgef12Q8R4H2 1543 aaKnown RBP15.69■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Adcy10Q8C0T9 1614 aa15.68■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Chic2Q9D9G3 165 aa15.68■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Kdm6bQ5NCY0 1641 aa15.68■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Rrbp1Q99PL5 1605 aaKnown RBP15.68■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Jph4Q80WT0 628 aa15.67■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Mapkbp1Q6NS57 1503 aa15.67■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Ankrd36D3Z4K0 1415 aa15.67■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Dhx57Q6P5D3 1388 aaKnown RBP15.67■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Fam163aQ8CAA5 168 aa15.66■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Abcc5Q9R1X5 1436 aa15.66■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 AknaQ80VW7 1404 aa15.65■□□□□ 0.1
Ttc39a-202ENSMUST00000106618 Rfx7F8VPJ6 1459 aa15.65■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms