RNA–Protein interactions for RNA: ENSMUST00000103650.2

Trav12-1-201, Transcript of T cell receptor alpha variable 12-1 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav12-1, Length 344 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1-201ENSMUST00000103650 Samd9lQ69Z37 1561 aa13.75□□□□□ -0.21
Trav12-1-201ENSMUST00000103650 Slc34a2Q9DBP0 697 aa13.73□□□□□ -0.21
Trav12-1-201ENSMUST00000103650 Nup160Q9Z0W3 1402 aaKnown RBP13.73□□□□□ -0.21
Trav12-1-201ENSMUST00000103650 Cc2d2bA0A286YDU8 1405 aa13.72□□□□□ -0.21
Trav12-1-201ENSMUST00000103650 Pabpn1Q8CCS6 302 aaKnown RBP13.7□□□□□ -0.22
Trav12-1-201ENSMUST00000103650 Shroom4Q1W617 1475 aa13.69□□□□□ -0.22
Trav12-1-201ENSMUST00000103650 PtprkP35822 1457 aa13.68□□□□□ -0.22
Trav12-1-201ENSMUST00000103650 Rad54l2Q99NG0 1466 aa13.68□□□□□ -0.22
Trav12-1-201ENSMUST00000103650 Pbrm1Q8BSQ9 1634 aaKnown RBP13.68□□□□□ -0.22
Trav12-1-201ENSMUST00000103650 Grin2aP35436 1464 aa13.65□□□□□ -0.22
Trav12-1-201ENSMUST00000103650 Magi3Q9EQJ9 1476 aa13.65□□□□□ -0.22
Trav12-1-201ENSMUST00000103650 Setd1bQ8CFT2 1985 aa13.62□□□□□ -0.23
Trav12-1-201ENSMUST00000103650 HrcG5E8J6 738 aa13.62□□□□□ -0.23
Trav12-1-201ENSMUST00000103650 AqrQ8CFQ3 1481 aaKnown RBP13.61□□□□□ -0.23
Trav12-1-201ENSMUST00000103650 Pelp1Q9DBD5 1123 aaKnown RBP13.6□□□□□ -0.23
Trav12-1-201ENSMUST00000103650 Col17a1Q07563 1470 aa13.59□□□□□ -0.23
Trav12-1-201ENSMUST00000103650 SynmQ70IV5 1561 aa13.58□□□□□ -0.24
Trav12-1-201ENSMUST00000103650 Pla2r1Q62028 1487 aa13.57□□□□□ -0.24
Trav12-1-201ENSMUST00000103650 Zeb1Q64318 1117 aa13.57□□□□□ -0.24
Trav12-1-201ENSMUST00000103650 Fgd6Q69ZL1 1399 aa13.56□□□□□ -0.24
Trav12-1-201ENSMUST00000103650 Gpatch8A2A6A1 1505 aa13.54□□□□□ -0.24
Trav12-1-201ENSMUST00000103650 Npm2Q80W85 207 aa13.54□□□□□ -0.24
Trav12-1-201ENSMUST00000103650 Mroh2bQ7M6Y6 1581 aa13.52□□□□□ -0.25
Trav12-1-201ENSMUST00000103650 Sox12Q04890 314 aa13.47□□□□□ -0.25
Trav12-1-201ENSMUST00000103650 Zcchc11B2RX14 1644 aaKnown RBP13.46□□□□□ -0.25
Trav12-1-201ENSMUST00000103650 Rapgef2Q8CHG7 1496 aa13.45□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 WdpcpQ8C456 722 aa13.44□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 AknaQ80VW7 1404 aa13.44□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 EprsQ8CGC7 1512 aaKnown RBP13.44□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 Carmil1Q6EDY6 1374 aa13.43□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 CadpsQ80TJ1 1355 aa13.43□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 Arhgap35Q91YM2 1499 aa13.42□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 Arhgap27A2AB59 869 aa13.42□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 Map3k1P53349 1493 aa13.42□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 Gapvd1Q6PAR5 1458 aa13.4□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 TchhA0A0B4J1F9 1599 aa13.4□□□□□ -0.26
Trav12-1-201ENSMUST00000103650 Abcc1O35379 1528 aa13.39□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Adamts12Q811B3 1600 aa13.39□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 PxdnQ3UQ28 1475 aa13.39□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Abcc2Q8VI47 1543 aa13.39□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 WizO88286 1684 aaKnown RBP13.38□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Gm156Q58A37 223 aa13.37□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Dnmt1P13864 1620 aaKnown RBP13.37□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Abca16E9PWJ7 1678 aa13.37□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Adgrl3Q80TS3 1537 aa13.36□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Cep162Q6ZQ06 1403 aa13.36□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Map3k4O08648 1597 aa13.36□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Cep170Q6A065 1588 aa13.36□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Fam71e1A1L3C1 212 aa13.35□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Ythdc2B2RR83 1445 aaKnown RBP13.35□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Soga1E1U8D0 1418 aa13.34□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Neo1P97798 1493 aa13.34□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Clip1Q922J3 1391 aa13.33□□□□□ -0.27
Trav12-1-201ENSMUST00000103650 Rpap1Q80TE0 1409 aa13.33□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 Gm7298A0A0N4SVU1 1476 aa13.33□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 Eif4g1Q6NZJ6 1600 aaKnown RBP13.32□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 Gm14025A2AP89 1413 aa13.31□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 Polr1aO35134 1717 aaKnown RBP13.3□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 PtprtQ99M80 1454 aa13.29□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 BC005561E9Q5E2 1589 aa13.29□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 Slx4Q6P1D7 1565 aa13.29□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 Chd1P40201 1711 aa13.28□□□□□ -0.28
Trav12-1-201ENSMUST00000103650 Myt1lP97500 1187 aa13.27□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Jph4Q80WT0 628 aa13.27□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Abca5Q8K448 1642 aa13.24□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Arhgef5E9Q7D5 1581 aa13.24□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Cux1P53564 1515 aa13.24□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Fyco1Q8VDC1 1437 aa13.23□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Ttbk1Q6PCN3 1308 aa13.23□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Cdca7Q9D0M2 382 aa13.23□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 WrnO09053 1401 aa13.22□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Arhgef12Q8R4H2 1543 aaKnown RBP13.22□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 Nlrp6Q91WS2 869 aa13.21□□□□□ -0.29
Trav12-1-201ENSMUST00000103650 AI481877A2ALV5 1481 aa13.19□□□□□ -0.3
Trav12-1-201ENSMUST00000103650 Pprc1Q6NZN1 1644 aa13.17□□□□□ -0.3
Trav12-1-201ENSMUST00000103650 Setbp1Q9Z180 1582 aa13.16□□□□□ -0.3
Trav12-1-201ENSMUST00000103650 Fkbp15Q6P9Q6 1216 aaKnown RBP13.15□□□□□ -0.3
Trav12-1-201ENSMUST00000103650 Igf1rQ60751 1373 aa13.13□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Pcdh10E9PXQ7 1057 aa13.13□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Ankrd26Q811D2 1581 aa13.12□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Rrbp1Q99PL5 1605 aaKnown RBP13.12□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Aebp1Q640N1 1128 aa13.11□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Kdm5bQ80Y84 1544 aa13.11□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Ube2uB1AUC4 352 aa13.1□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Ifnlr1Q8CGK5 535 aa13.1□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 C1qtnf12Q8R2Z0 308 aa13.1□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Arhgap31A6X8Z5 1425 aa13.1□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Setd5Q5XJV7 1441 aa13.09□□□□□ -0.31
Trav12-1-201ENSMUST00000103650 Ppp1r18Q8BQ30 594 aa13.08□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 Eea1Q8BL66 1411 aa13.06□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 Ak9G3UYQ4 1894 aa13.06□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 Kif27Q7M6Z4 1394 aa13.05□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 BlmO88700 1416 aa13.05□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 Ccdc141E9Q8Q6 1531 aa13.04□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 Lrrc9Q8CDN9 1456 aa13.04□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 Arid3cA6PWV5 409 aa13.03□□□□□ -0.32
Trav12-1-201ENSMUST00000103650 Clasp1Q80TV8 1535 aaKnown RBP13.02□□□□□ -0.33
Trav12-1-201ENSMUST00000103650 Ncoa2Q61026 1462 aa13.01□□□□□ -0.33
Trav12-1-201ENSMUST00000103650 Wdr7Q920I9 1489 aa13.01□□□□□ -0.33
Trav12-1-201ENSMUST00000103650 Erich3F6QRE9 1637 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms