RNA–Protein interactions for RNA: ENSMUST00000103220.3

Snrnp200-201, Transcript of U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp200, Length 6,745 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200-201ENSMUST00000103220 Chic2Q9D9G3 165 aa12.09□□□□□ -0.47
Snrnp200-201ENSMUST00000103220 Phldb1Q6PDH0 1371 aaKnown RBP12.08□□□□□ -0.47
Snrnp200-201ENSMUST00000103220 Rsf1E9PWW9 1441 aaKnown RBP12.08□□□□□ -0.48
Snrnp200-201ENSMUST00000103220 Smarca2Q6DIC0 1577 aa12.07□□□□□ -0.48
Snrnp200-201ENSMUST00000103220 CatipB9EKE5 520 aa12.06□□□□□ -0.48
Snrnp200-201ENSMUST00000103220 Upf2A2AT37 1269 aaKnown RBP12.05□□□□□ -0.48
Snrnp200-201ENSMUST00000103220 Hsp90aa1P07901 733 aaKnown RBP12□□□□□ -0.49
Snrnp200-201ENSMUST00000103220 BlmO88700 1416 aa11.99□□□□□ -0.49
Snrnp200-201ENSMUST00000103220 Fgd1P52734 960 aa11.99□□□□□ -0.49
Snrnp200-201ENSMUST00000103220 Ythdc1E9Q5K9 736 aaKnown RBP11.98□□□□□ -0.49
Snrnp200-201ENSMUST00000103220 Rad21Q61550 635 aaKnown RBP11.97□□□□□ -0.49
Snrnp200-201ENSMUST00000103220 MyclP10166 368 aa11.96□□□□□ -0.49
Snrnp200-201ENSMUST00000103220 Cep164Q5DU05 1446 aa11.96□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 IqubQ8CDK3 788 aa11.94□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Sall2Q9QX96 1004 aa11.93□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Ccdc18Q640L5 1455 aa11.92□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Calr4Q3TQS0 420 aa11.92□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Anks4bQ8K3X6 423 aa11.92□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Irx6Q9ER75 438 aa11.92□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Arhgap27A2AB59 869 aa11.91□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Ppp4r2Q0VGB7 417 aa11.9□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Znf326O88291 580 aa11.9□□□□□ -0.5
Snrnp200-201ENSMUST00000103220 Kif15Q6P9L6 1387 aa11.89□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Aplp2Q06335 707 aa11.89□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Lmod3E9QA62 571 aa11.88□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Setd5Q5XJV7 1441 aa11.87□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Smarca4Q3TKT4 1613 aaKnown RBP11.87□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Trim26Q99PN3 545 aa11.87□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Rgl3Q3UYI5 709 aa11.86□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Srpk2O54781 681 aaKnown RBP11.86□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Kdm2aP59997 1161 aa11.85□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 DekQ7TNV0 380 aaKnown RBP11.85□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Exosc9Q9JHI7 438 aaKnown RBP11.84□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Ccdc9Q8VC31 543 aaKnown RBP11.84□□□□□ -0.51
Snrnp200-201ENSMUST00000103220 Wdr43Q6ZQL4 677 aaKnown RBP11.83□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Mrs2Q5NCE8 434 aa11.83□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Vsig10D3YX43 558 aa11.82□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 NgefQ8CHT1 710 aa11.82□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Mroh3A0A1D5RM54 893 aa11.82□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Gm20521D3Z5F7 333 aa11.8□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Ppp1r18Q8BQ30 594 aa11.8□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Trim44Q9QXA7 346 aa11.79□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Rrp7aQ9D1C9 280 aaKnown RBP11.78□□□□□ -0.52
Snrnp200-201ENSMUST00000103220 Rtn4Q99P72 1162 aaKnown RBP11.76□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Stk24Q99KH8 431 aa11.75□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Grwd1Q810D6 446 aaKnown RBP11.75□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Fam71e1A1L3C1 212 aa11.75□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Zfp777B9EKF4 885 aa11.74□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Stag3O70576 1240 aa11.74□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Hsp90ab1P11499 724 aaKnown RBP11.73□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Mapk8ip3Q9ESN9 1337 aa11.73□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Ggt6Q6PDE7 497 aa11.72□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Iqcf3Q9D498 203 aa11.71□□□□□ -0.53
Snrnp200-201ENSMUST00000103220 Mtus2Q3UHD3 1353 aa11.7□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 CanxP35564 591 aaKnown RBP11.7□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 Card11Q8CIS0 1159 aa11.7□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 PtmaP26350 111 aa11.69□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 1700123L14RikQ3V2K7 440 aa11.68□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 Trim30dE9PWL0 497 aa11.67□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 Eea1Q8BL66 1411 aa11.67□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 Golga3P55937 1487 aa11.67□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 Iqgap2Q3UQ44 1575 aa11.66□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 Clstn1Q9EPL2 979 aa11.66□□□□□ -0.54
Snrnp200-201ENSMUST00000103220 CftrP26361 1476 aa11.64□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Gm6268A2A3U9 297 aa11.64□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Arid4bA2CG63 1314 aaKnown RBP11.64□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Eif4g2Q62448 906 aaKnown RBP11.63□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Cwc22Q8C5N3 908 aaKnown RBP11.63□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Htatsf1Q8BGC0 757 aa11.63□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Mrc2Q64449 1479 aa11.63□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 1700019A02RikA0A087WPV9 146 aa11.62□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Chmp4bQ9D8B3 224 aaKnown RBP11.62□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Neurod2Q62414 383 aa11.61□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 MlecQ6ZQI3 291 aaKnown RBP11.61□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Ofd1Q80Z25 1017 aa11.61□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 NudcO35685 332 aaKnown RBP11.61□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Pes1Q9EQ61 584 aaKnown RBP11.6□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Cttnbp2B9EJA2 1648 aa11.6□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 PnnO35691 725 aaKnown RBP11.6□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Arid3cA6PWV5 409 aa11.6□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Plcb2A3KGF7 1181 aa11.59□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Apbb1Q9QXJ1 710 aa11.59□□□□□ -0.55
Snrnp200-201ENSMUST00000103220 Bcl11aQ9QYE3 773 aa11.58□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Cux2P70298 1426 aa11.58□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 AknaQ80VW7 1404 aa11.58□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Cnga1P29974 684 aa11.58□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Fmn1Q05860 1466 aa11.56□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 HdgfP51859 237 aaKnown RBP11.55□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Q8BT18 775 aa11.55□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Adam1bQ8R534 806 aa11.55□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Ppm1gQ61074 542 aa11.54□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Psme1P97371 249 aa11.54□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Rtf1A2AQ19 715 aaKnown RBP11.54□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Map7O88735 730 aa11.54□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Lemd3Q9WU40 921 aa11.53□□□□□ -0.56
Snrnp200-201ENSMUST00000103220 Ccdc27Q3V036 639 aa11.52□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 BicraF8VPZ9 1578 aa11.52□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Stk26Q99JT2 416 aa11.52□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Aebp2Q9Z248 504 aaKnown RBP11.51□□□□□ -0.57
Snrnp200-201ENSMUST00000103220 Mia2Q91ZV0 1396 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 231.1 ms