RNA–Protein interactions for RNA: ENSMUST00000102838.9

Sptbn1-203, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptbn1, Length 9,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-203ENSMUST00000102838 Aplp2Q06335 707 aa11.72□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Noc3lQ8VI84 807 aaKnown RBP11.72□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 HdgfP51859 237 aaKnown RBP11.71□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Pes1Q9EQ61 584 aaKnown RBP11.71□□□□□ -0.53
Sptbn1-203ENSMUST00000102838 Gm6268A2A3U9 297 aa11.7□□□□□ -0.54
Sptbn1-203ENSMUST00000102838 Exosc9Q9JHI7 438 aaKnown RBP11.7□□□□□ -0.54
Sptbn1-203ENSMUST00000102838 Iqcf3Q9D498 203 aa11.69□□□□□ -0.54
Sptbn1-203ENSMUST00000102838 Q8BT18 775 aa11.68□□□□□ -0.54
Sptbn1-203ENSMUST00000102838 NgefQ8CHT1 710 aa11.67□□□□□ -0.54
Sptbn1-203ENSMUST00000102838 Ccdc9Q8VC31 543 aaKnown RBP11.65□□□□□ -0.54
Sptbn1-203ENSMUST00000102838 PtmaP26350 111 aa11.65□□□□□ -0.54
Sptbn1-203ENSMUST00000102838 Grwd1Q810D6 446 aaKnown RBP11.64□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Vsig10D3YX43 558 aa11.64□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Rb1cc1Q9ESK9 1588 aa11.62□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Ppp1r18Q8BQ30 594 aa11.62□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Trim26Q99PN3 545 aa11.61□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Rad21Q61550 635 aaKnown RBP11.61□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Prm3Q62100 101 aa11.61□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Chmp4bQ9D8B3 224 aaKnown RBP11.61□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Srpk2O54781 681 aaKnown RBP11.6□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Trim44Q9QXA7 346 aa11.6□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 Nol10Q5RJG1 687 aaKnown RBP11.6□□□□□ -0.55
Sptbn1-203ENSMUST00000102838 MlecQ6ZQI3 291 aaKnown RBP11.58□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Mapk8ip3Q9ESN9 1337 aa11.57□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Sh3bp5Q9Z131 463 aa11.57□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 ClspnQ80YR7 1315 aa11.55□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Csrnp3P59055 597 aa11.55□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Isy1Q69ZQ2 285 aaKnown RBP11.54□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Anapc15P60007 132 aa11.54□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Clip1Q922J3 1391 aa11.54□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Mier1Q5UAK0 511 aa11.53□□□□□ -0.56
Sptbn1-203ENSMUST00000102838 Brd4Q9ESU6 1400 aaKnown RBP11.52□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Adam1bQ8R534 806 aa11.52□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Supt5hO55201 1082 aaKnown RBP11.49□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Kdm2aP59997 1161 aa11.49□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Chic2Q9D9G3 165 aa11.49□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Stag3O70576 1240 aa11.48□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 NacadQ5SWP3 1504 aa11.48□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Mroh3A0A1D5RM54 893 aa11.47□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Tpm3-rs7D3Z2H9 248 aa11.47□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Gm20521D3Z5F7 333 aa11.47□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Pde3bQ61409 1100 aa11.47□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Rassf8Q8CJ96 419 aa11.46□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 NudcO35685 332 aaKnown RBP11.46□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Ciz1Q8VEH2 845 aa11.46□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Arid4bA2CG63 1314 aaKnown RBP11.46□□□□□ -0.57
Sptbn1-203ENSMUST00000102838 Vps53Q8CCB4 832 aa11.45□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Baz1aO88379 1555 aa11.45□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Wwc2Q6NXJ0 1187 aa11.45□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Hsp90ab1P11499 724 aaKnown RBP11.45□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Rtf1A2AQ19 715 aaKnown RBP11.44□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 1700019A02RikA0A087WPV9 146 aa11.44□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Gm973E9Q295 1059 aa11.44□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 MccE9PWI3 1003 aa11.44□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Calr4Q3TQS0 420 aa11.44□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Casc1Q6TDU8 730 aa11.44□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Eid3Q3V124 375 aa11.43□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Ercc6F8VPZ5 1481 aa11.42□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Mapk8ip2Q9ERE9 830 aa11.42□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Mak16Q8BGS0 296 aaKnown RBP11.42□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Trim30dE9PWL0 497 aa11.42□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Map7O88735 730 aa11.42□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Hsp90b1P08113 802 aaKnown RBP11.41□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Ubap1lG3UW59 384 aa11.4□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 BlmO88700 1416 aa11.4□□□□□ -0.58
Sptbn1-203ENSMUST00000102838 Tomm22Q9CPQ3 142 aa11.39□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Rgl3Q3UYI5 709 aa11.39□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Arhgap27A2AB59 869 aa11.38□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Tnnt2P50752 301 aa11.38□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Paf1Q8K2T8 535 aa11.38□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Stk24Q99KH8 431 aa11.37□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Calcoco2A2A6M5 331 aa11.36□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Sart3Q9JLI8 962 aaKnown RBP11.35□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Psme1P97371 249 aa11.34□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Ccdc18Q640L5 1455 aa11.34□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Ppp4r2Q0VGB7 417 aa11.34□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Crybg2B7ZCC2 1516 aa11.34□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Ddx11Q6AXC6 880 aa11.34□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Chrna2Q91X60 512 aa11.34□□□□□ -0.59
Sptbn1-203ENSMUST00000102838 Fbln2P37889 1221 aa11.33□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Hs1bp3Q3TC93 395 aa11.33□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Rsph4aQ8BYM7 716 aa11.33□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Mrs2Q5NCE8 434 aa11.33□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 HnrnpuQ8VEK3 800 aaKnown RBP11.32□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Odf2A3KGV1 830 aaKnown RBP11.32□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Rrp7aQ9D1C9 280 aaKnown RBP11.32□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Htatsf1Q8BGC0 757 aa11.31□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Kri1Q8VDQ9 704 aaKnown RBP11.31□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Plcb2A3KGF7 1181 aa11.31□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Spag9Q58A65 1321 aaKnown RBP11.29□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Sf3b2Q3UJB0 878 aaKnown RBP11.29□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Bcl11bQ99PV8 884 aa11.29□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Egfem1Q8C088 590 aa11.29□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Ccar1Q8CH18 1146 aaKnown RBP11.29□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Chmp3Q9CQ10 224 aa11.29□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Txndc2Q6P902 515 aa11.28□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Mtus2Q3UHD3 1353 aa11.28□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Iffo2Q8R2V2 512 aa11.28□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 Ccdc47Q9D024 483 aaKnown RBP11.28□□□□□ -0.6
Sptbn1-203ENSMUST00000102838 KnstrnQ9D9Z1 312 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms