RNA–Protein interactions for RNA: ENSMUST00000102823.9

Ttc39b-203, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ttc39b, Length 8,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-203ENSMUST00000102823 Kif27Q7M6Z4 1394 aa12.97□□□□□ -0.33
Ttc39b-203ENSMUST00000102823 Nlrp6Q91WS2 869 aa12.96□□□□□ -0.33
Ttc39b-203ENSMUST00000102823 Dhx57Q6P5D3 1388 aaKnown RBP12.96□□□□□ -0.33
Ttc39b-203ENSMUST00000102823 AknaQ80VW7 1404 aa12.94□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Rsph4aQ8BYM7 716 aa12.94□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Plppr3Q7TPB0 716 aa12.93□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Rpap1Q80TE0 1409 aa12.93□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Chic2Q9D9G3 165 aa12.93□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Carmil1Q6EDY6 1374 aa12.92□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Fyco1Q8VDC1 1437 aa12.92□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Ccdc88bQ4QRL3 1481 aa12.91□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Eid3Q3V124 375 aa12.9□□□□□ -0.34
Ttc39b-203ENSMUST00000102823 Zfp777B9EKF4 885 aa12.89□□□□□ -0.35
Ttc39b-203ENSMUST00000102823 Pcgf6Q99NA9 353 aa12.89□□□□□ -0.35
Ttc39b-203ENSMUST00000102823 CntlnA2AM05 1397 aa12.88□□□□□ -0.35
Ttc39b-203ENSMUST00000102823 Dhx29Q6PGC1 1365 aaKnown RBP12.88□□□□□ -0.35
Ttc39b-203ENSMUST00000102823 Efcab5A0JP43 1406 aa12.85□□□□□ -0.35
Ttc39b-203ENSMUST00000102823 Cc2d2aQ8CFW7 1633 aa12.84□□□□□ -0.35
Ttc39b-203ENSMUST00000102823 Upf2A2AT37 1269 aaKnown RBP12.84□□□□□ -0.35
Ttc39b-203ENSMUST00000102823 IqubQ8CDK3 788 aa12.83□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 BicraF8VPZ9 1578 aa12.82□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Aebp1Q640N1 1128 aa12.81□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Mrc2Q64449 1479 aa12.81□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Lemd3Q9WU40 921 aa12.8□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Cwc22Q8C5N3 908 aaKnown RBP12.8□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Eif5bQ05D44 1216 aaKnown RBP12.79□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Ppp1r18Q8BQ30 594 aa12.79□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Mroh3A0A1D5RM54 893 aa12.79□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Rrp7aQ9D1C9 280 aaKnown RBP12.78□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 P3h3Q8CG70 732 aa12.77□□□□□ -0.36
Ttc39b-203ENSMUST00000102823 Ncoa2Q61026 1462 aa12.76□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 DiexfQ8BTT6 772 aaKnown RBP12.75□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Arhgap35Q91YM2 1499 aa12.75□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Srpk2O54781 681 aaKnown RBP12.75□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Pabpn1Q8CCS6 302 aaKnown RBP12.75□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Plekhh2Q8C115 1491 aa12.74□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 WrnO09053 1401 aa12.74□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Zbtb4Q5F293 982 aa12.73□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 NrkQ9R0G8 1455 aa12.73□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Rgl3Q3UYI5 709 aa12.73□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Cux1P53564 1515 aa12.73□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Shroom4Q1W617 1475 aa12.72□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Wdr62Q3U3T8 1523 aa12.71□□□□□ -0.37
Ttc39b-203ENSMUST00000102823 Rapgef2Q8CHG7 1496 aa12.71□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Frmpd1A2AKB4 1549 aa12.71□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Top2aQ01320 1528 aaKnown RBP12.7□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Soga1E1U8D0 1418 aa12.7□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 UacaQ8CGB3 1411 aa12.69□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Map3k1P53349 1493 aa12.69□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Supt5hO55201 1082 aaKnown RBP12.69□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Arid4bA2CG63 1314 aaKnown RBP12.68□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Exosc9Q9JHI7 438 aaKnown RBP12.68□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Duox2A2AQ99 1517 aa12.67□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 Top2bQ64511 1612 aa12.65□□□□□ -0.38
Ttc39b-203ENSMUST00000102823 MyclP10166 368 aa12.64□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Ift140E9PY46 1464 aa12.64□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Urb2E9Q7L1 1524 aaKnown RBP12.64□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Crocc2F6XLV1 1638 aa12.64□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Rtl5Q5DTT4 599 aa12.64□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Cc2d2bA0A286YDU8 1405 aa12.63□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Arid3cA6PWV5 409 aa12.63□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Map4P27546 1125 aaKnown RBP12.63□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Gm20521D3Z5F7 333 aa12.62□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Kdm2aP59997 1161 aa12.62□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Card11Q8CIS0 1159 aa12.61□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Ppargc1bQ8VHJ7 1014 aa12.61□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Prdm10Q3UTQ7 1184 aa12.6□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Stard8Q8K031 1019 aa12.6□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Fhad1A6PWD2 1420 aa12.59□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Lamc3Q9R0B6 1581 aa12.59□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 Camsap1A2AHC3 1581 aa12.58□□□□□ -0.39
Ttc39b-203ENSMUST00000102823 PogzQ8BZH4 1409 aaKnown RBP12.58□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Grin2bQ01097 1482 aa12.58□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Iqcf3Q9D498 203 aa12.56□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 HdgfP51859 237 aaKnown RBP12.56□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Myt1Q8CFC2 1127 aa12.56□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Fgd6Q69ZL1 1399 aa12.55□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Polr3glQ8R0C0 218 aa12.55□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Stag3O70576 1240 aa12.55□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Jph4Q80WT0 628 aa12.55□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Mrs2Q5NCE8 434 aa12.54□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Grwd1Q810D6 446 aaKnown RBP12.52□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Pkd2O35245 966 aa12.52□□□□□ -0.4
Ttc39b-203ENSMUST00000102823 Stk24Q99KH8 431 aa12.52□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Chmp4bQ9D8B3 224 aaKnown RBP12.51□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Ccnb3Q810T2 1396 aa12.51□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Nup155Q99P88 1391 aaKnown RBP12.51□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Cabp1Q9JLK7 227 aa12.5□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 CadpsQ80TJ1 1355 aa12.5□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Mroh2bQ7M6Y6 1581 aa12.49□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Sart1Q9Z315 806 aaKnown RBP12.49□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Trak1Q6PD31 939 aa12.48□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 TchhA0A0B4J1F9 1599 aa12.48□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Rock2P70336 1388 aa12.48□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Kif3bQ61771 747 aa12.47□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Ccdc141E9Q8Q6 1531 aa12.47□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Mapk8ip3Q9ESN9 1337 aa12.47□□□□□ -0.41
Ttc39b-203ENSMUST00000102823 Anp32aO35381 247 aa12.46□□□□□ -0.42
Ttc39b-203ENSMUST00000102823 Gm14025A2AP89 1413 aa12.45□□□□□ -0.42
Ttc39b-203ENSMUST00000102823 SynmQ70IV5 1561 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms