RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 CenpbP27790 599 aa18.36■□□□□ 0.53
Vamp1-203ENSMUST00000100942 Ankrd26Q811D2 1581 aa18.35■□□□□ 0.53
Vamp1-203ENSMUST00000100942 Anks4bQ8K3X6 423 aa18.35■□□□□ 0.53
Vamp1-203ENSMUST00000100942 Setd5Q5XJV7 1441 aa18.35■□□□□ 0.53
Vamp1-203ENSMUST00000100942 Samd9lQ69Z37 1561 aa18.31■□□□□ 0.52
Vamp1-203ENSMUST00000100942 Dhx29Q6PGC1 1365 aaKnown RBP18.29■□□□□ 0.52
Vamp1-203ENSMUST00000100942 Kif21aQ9QXL2 1672 aa18.28■□□□□ 0.52
Vamp1-203ENSMUST00000100942 Tiam1Q60610 1591 aa18.27■□□□□ 0.52
Vamp1-203ENSMUST00000100942 Carmil1Q6EDY6 1374 aa18.27■□□□□ 0.52
Vamp1-203ENSMUST00000100942 Ncapd3Q6ZQK0 1506 aa18.27■□□□□ 0.52
Vamp1-203ENSMUST00000100942 Mrc2Q64449 1479 aa18.27■□□□□ 0.51
Vamp1-203ENSMUST00000100942 SynmQ70IV5 1561 aa18.26■□□□□ 0.51
Vamp1-203ENSMUST00000100942 Dnajc5bQ9CQ94 199 aa18.25■□□□□ 0.51
Vamp1-203ENSMUST00000100942 Lmo7E9PYF4 1699 aaKnown RBP18.24■□□□□ 0.51
Vamp1-203ENSMUST00000100942 Crocc2F6XLV1 1638 aa18.24■□□□□ 0.51
Vamp1-203ENSMUST00000100942 Cux1P53564 1515 aa18.24■□□□□ 0.51
Vamp1-203ENSMUST00000100942 Pcf11G3X9Z4 1553 aa18.23■□□□□ 0.51
Vamp1-203ENSMUST00000100942 Ap3b1Q9Z1T1 1105 aa18.23■□□□□ 0.51
Vamp1-203ENSMUST00000100942 Naip1Q9QWK5 1403 aa18.2■□□□□ 0.5
Vamp1-203ENSMUST00000100942 Urb2E9Q7L1 1524 aaKnown RBP18.17■□□□□ 0.5
Vamp1-203ENSMUST00000100942 Slx4Q6P1D7 1565 aa18.17■□□□□ 0.5
Vamp1-203ENSMUST00000100942 Rad54l2Q99NG0 1466 aa18.17■□□□□ 0.5
Vamp1-203ENSMUST00000100942 Aplp2Q06335 707 aa18.13■□□□□ 0.49
Vamp1-203ENSMUST00000100942 Aebp2Q9Z248 504 aaKnown RBP18.13■□□□□ 0.49
Vamp1-203ENSMUST00000100942 Polr1aO35134 1717 aaKnown RBP18.13■□□□□ 0.49
Vamp1-203ENSMUST00000100942 Fyco1Q8VDC1 1437 aa18.11■□□□□ 0.49
Vamp1-203ENSMUST00000100942 Peg3Q3URU2 1571 aa18.09■□□□□ 0.49
Vamp1-203ENSMUST00000100942 CntlnA2AM05 1397 aa18.08■□□□□ 0.49
Vamp1-203ENSMUST00000100942 BlmO88700 1416 aa18.08■□□□□ 0.49
Vamp1-203ENSMUST00000100942 Pla2r1Q62028 1487 aa18.07■□□□□ 0.48
Vamp1-203ENSMUST00000100942 Magi3Q9EQJ9 1476 aa18.06■□□□□ 0.48
Vamp1-203ENSMUST00000100942 Rpap1Q80TE0 1409 aa18.06■□□□□ 0.48
Vamp1-203ENSMUST00000100942 Kdm5bQ80Y84 1544 aa18.06■□□□□ 0.48
Vamp1-203ENSMUST00000100942 TchhA0A0B4J1F9 1599 aa18.05■□□□□ 0.48
Vamp1-203ENSMUST00000100942 Plb1Q3TTY0 1478 aa18.04■□□□□ 0.48
Vamp1-203ENSMUST00000100942 EprsQ8CGC7 1512 aaKnown RBP18.03■□□□□ 0.48
Vamp1-203ENSMUST00000100942 Grin2aP35436 1464 aa17.99■□□□□ 0.47
Vamp1-203ENSMUST00000100942 Disp1Q3TDN0 1521 aa17.99■□□□□ 0.47
Vamp1-203ENSMUST00000100942 Setd1bQ8CFT2 1985 aa17.99■□□□□ 0.47
Vamp1-203ENSMUST00000100942 Aebp1Q640N1 1128 aa17.98■□□□□ 0.47
Vamp1-203ENSMUST00000100942 Abca5Q8K448 1642 aa17.98■□□□□ 0.47
Vamp1-203ENSMUST00000100942 Gm1043A0A140LJC2 1431 aa17.95■□□□□ 0.46
Vamp1-203ENSMUST00000100942 Gpatch8A2A6A1 1505 aa17.94■□□□□ 0.46
Vamp1-203ENSMUST00000100942 CadpsQ80TJ1 1355 aa17.94■□□□□ 0.46
Vamp1-203ENSMUST00000100942 Nop58Q6DFW4 536 aaKnown RBP17.93■□□□□ 0.46
Vamp1-203ENSMUST00000100942 Adamts12Q811B3 1600 aa17.93■□□□□ 0.46
Vamp1-203ENSMUST00000100942 WizO88286 1684 aaKnown RBP17.93■□□□□ 0.46
Vamp1-203ENSMUST00000100942 Cdk11bP24788 784 aaKnown RBP17.92■□□□□ 0.46
Vamp1-203ENSMUST00000100942 Lmod2Q3UHZ5 550 aa17.92■□□□□ 0.46
Vamp1-203ENSMUST00000100942 Gm7298A0A0N4SVU1 1476 aa17.91■□□□□ 0.46
Vamp1-203ENSMUST00000100942 3425401B19RikD3Z1D3 1412 aa17.91■□□□□ 0.46
Vamp1-203ENSMUST00000100942 DiexfQ8BTT6 772 aaKnown RBP17.9■□□□□ 0.46
Vamp1-203ENSMUST00000100942 Pbrm1Q8BSQ9 1634 aaKnown RBP17.89■□□□□ 0.46
Vamp1-203ENSMUST00000100942 TonslQ6NZL6 1363 aa17.88■□□□□ 0.45
Vamp1-203ENSMUST00000100942 Ift140E9PY46 1464 aa17.88■□□□□ 0.45
Vamp1-203ENSMUST00000100942 Lrriq1Q0P5X1 1673 aa17.87■□□□□ 0.45
Vamp1-203ENSMUST00000100942 Nup160Q9Z0W3 1402 aaKnown RBP17.86■□□□□ 0.45
Vamp1-203ENSMUST00000100942 Abca16E9PWJ7 1678 aa17.84■□□□□ 0.45
Vamp1-203ENSMUST00000100942 Soga1E1U8D0 1418 aa17.83■□□□□ 0.45
Vamp1-203ENSMUST00000100942 PxdnQ3UQ28 1475 aa17.82■□□□□ 0.44
Vamp1-203ENSMUST00000100942 Lmtk2Q3TYD6 1471 aa17.79■□□□□ 0.44
Vamp1-203ENSMUST00000100942 Kif27Q7M6Z4 1394 aa17.76■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Fam50aQ9WV03 339 aaKnown RBP17.74■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Fhad1A6PWD2 1420 aa17.74■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Naip2Q9QUK4 1447 aa17.74■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Mapk8ip2Q9ERE9 830 aa17.74■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Gcc2Q8CHG3 1679 aa17.74■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Eid3Q3V124 375 aa17.73■□□□□ 0.43
Vamp1-203ENSMUST00000100942 BC005561E9Q5E2 1589 aa17.73■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Ccnb3Q810T2 1396 aa17.72■□□□□ 0.43
Vamp1-203ENSMUST00000100942 A2mQ6GQT1 1474 aa17.72■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Mia2Q91ZV0 1396 aa17.72■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Abcc2Q8VI47 1543 aa17.71■□□□□ 0.43
Vamp1-203ENSMUST00000100942 Cc2d2bA0A286YDU8 1405 aa17.71■□□□□ 0.42
Vamp1-203ENSMUST00000100942 NexmifQ5DTT1 1515 aa17.7■□□□□ 0.42
Vamp1-203ENSMUST00000100942 Vps8Q0P5W1 1427 aa17.7■□□□□ 0.42
Vamp1-203ENSMUST00000100942 ClspnQ80YR7 1315 aa17.69■□□□□ 0.42
Vamp1-203ENSMUST00000100942 WrnO09053 1401 aa17.68■□□□□ 0.42
Vamp1-203ENSMUST00000100942 Bcl11aQ9QYE3 773 aa17.67■□□□□ 0.42
Vamp1-203ENSMUST00000100942 Rapgef6Q5NCJ1 1609 aa17.66■□□□□ 0.42
Vamp1-203ENSMUST00000100942 SafbD3YXK2 937 aaKnown RBP17.65■□□□□ 0.42
Vamp1-203ENSMUST00000100942 Shroom2A2ALU4 1481 aa17.64■□□□□ 0.42
Vamp1-203ENSMUST00000100942 Rusc2Q80U22 1514 aa17.62■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Arhgap27A2AB59 869 aa17.62■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Dennd4bQ3U1Y4 1499 aa17.62■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Mug1P28665 1476 aa17.61■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Ncoa3O09000 1398 aa17.61■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Ankrd36D3Z4K0 1415 aa17.6■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Ccer2J3QPU5 274 aa17.6■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Arhgef11Q68FM7 1552 aa17.59■□□□□ 0.41
Vamp1-203ENSMUST00000100942 Cdc42bpaQ3UU96 1719 aa17.58■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Eif4g3Q80XI3 1579 aaKnown RBP17.58■□□□□ 0.4
Vamp1-203ENSMUST00000100942 UacaQ8CGB3 1411 aa17.56■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Map3k4O08648 1597 aa17.55■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Fhod3Q76LL6 1578 aa17.55■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Zcchc11B2RX14 1644 aaKnown RBP17.54■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Dnmt1P13864 1620 aaKnown RBP17.53■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Kiaa1551Q5DTW7 1521 aa17.53■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Chic2Q9D9G3 165 aa17.52■□□□□ 0.4
Vamp1-203ENSMUST00000100942 Cul7Q8VE73 1689 aa17.52■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms