RNA–Protein interactions for RNA: ENSMUST00000098613.8

Usp3-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

TSL 1 (best) BASIC

Gene Usp3, Length 2,797 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3-202ENSMUST00000098613 BlmO88700 1416 aa12.28□□□□□ -0.44
Usp3-202ENSMUST00000098613 AqrQ8CFQ3 1481 aaKnown RBP12.28□□□□□ -0.44
Usp3-202ENSMUST00000098613 Hspa5P20029 655 aaKnown RBP12.28□□□□□ -0.44
Usp3-202ENSMUST00000098613 Nolc1E9Q5C9 702 aaKnown RBP12.27□□□□□ -0.44
Usp3-202ENSMUST00000098613 Ifnlr1Q8CGK5 535 aa12.27□□□□□ -0.45
Usp3-202ENSMUST00000098613 NrkQ9R0G8 1455 aa12.26□□□□□ -0.45
Usp3-202ENSMUST00000098613 Ccdc18Q640L5 1455 aa12.26□□□□□ -0.45
Usp3-202ENSMUST00000098613 Anp32aO35381 247 aa12.25□□□□□ -0.45
Usp3-202ENSMUST00000098613 Calr4Q3TQS0 420 aa12.23□□□□□ -0.45
Usp3-202ENSMUST00000098613 Sin3aQ60520 1274 aaKnown RBP12.23□□□□□ -0.45
Usp3-202ENSMUST00000098613 Lamc3Q9R0B6 1581 aa12.22□□□□□ -0.45
Usp3-202ENSMUST00000098613 Tiam1Q60610 1591 aa12.22□□□□□ -0.45
Usp3-202ENSMUST00000098613 Naip1Q9QWK5 1403 aa12.21□□□□□ -0.45
Usp3-202ENSMUST00000098613 Pds5bQ4VA53 1446 aaKnown RBP12.21□□□□□ -0.46
Usp3-202ENSMUST00000098613 Wdr62Q3U3T8 1523 aa12.2□□□□□ -0.46
Usp3-202ENSMUST00000098613 Stra8P70278 393 aa12.19□□□□□ -0.46
Usp3-202ENSMUST00000098613 Map3k1P53349 1493 aa12.18□□□□□ -0.46
Usp3-202ENSMUST00000098613 Frmpd1A2AKB4 1549 aa12.18□□□□□ -0.46
Usp3-202ENSMUST00000098613 Slx4Q6P1D7 1565 aa12.18□□□□□ -0.46
Usp3-202ENSMUST00000098613 Shroom4Q1W617 1475 aa12.17□□□□□ -0.46
Usp3-202ENSMUST00000098613 TchhA0A0B4J1F9 1599 aa12.17□□□□□ -0.46
Usp3-202ENSMUST00000098613 Camsap1A2AHC3 1581 aa12.17□□□□□ -0.46
Usp3-202ENSMUST00000098613 Eif5bQ05D44 1216 aaKnown RBP12.17□□□□□ -0.46
Usp3-202ENSMUST00000098613 Unc13aQ4KUS2 1712 aa12.15□□□□□ -0.46
Usp3-202ENSMUST00000098613 Ube2uB1AUC4 352 aa12.14□□□□□ -0.47
Usp3-202ENSMUST00000098613 3425401B19RikD3Z1D3 1412 aa12.14□□□□□ -0.47
Usp3-202ENSMUST00000098613 Erich3F6QRE9 1637 aa12.14□□□□□ -0.47
Usp3-202ENSMUST00000098613 Kif15Q6P9L6 1387 aa12.14□□□□□ -0.47
Usp3-202ENSMUST00000098613 Gm13697A2AK42 830 aa12.13□□□□□ -0.47
Usp3-202ENSMUST00000098613 Pcf11G3X9Z4 1553 aa12.13□□□□□ -0.47
Usp3-202ENSMUST00000098613 Ankrd26Q811D2 1581 aa12.12□□□□□ -0.47
Usp3-202ENSMUST00000098613 Supt16hQ920B9 1047 aa12.12□□□□□ -0.47
Usp3-202ENSMUST00000098613 Ppp4r2Q0VGB7 417 aa12.11□□□□□ -0.47
Usp3-202ENSMUST00000098613 UacaQ8CGB3 1411 aa12.1□□□□□ -0.47
Usp3-202ENSMUST00000098613 P3h3Q8CG70 732 aa12.1□□□□□ -0.47
Usp3-202ENSMUST00000098613 Dhx29Q6PGC1 1365 aaKnown RBP12.09□□□□□ -0.47
Usp3-202ENSMUST00000098613 Chic2Q9D9G3 165 aa12.08□□□□□ -0.48
Usp3-202ENSMUST00000098613 PrkcshO08795 521 aa12.07□□□□□ -0.48
Usp3-202ENSMUST00000098613 Smg6P61406 1418 aaKnown RBP12.07□□□□□ -0.48
Usp3-202ENSMUST00000098613 Mroh2bQ7M6Y6 1581 aa12.07□□□□□ -0.48
Usp3-202ENSMUST00000098613 Grin2bQ01097 1482 aa12.06□□□□□ -0.48
Usp3-202ENSMUST00000098613 Cux1P53564 1515 aa12.03□□□□□ -0.48
Usp3-202ENSMUST00000098613 Ercc6F8VPZ5 1481 aa12.03□□□□□ -0.48
Usp3-202ENSMUST00000098613 Wdr43Q6ZQL4 677 aaKnown RBP12.02□□□□□ -0.48
Usp3-202ENSMUST00000098613 Lmo7E9PYF4 1699 aaKnown RBP12.02□□□□□ -0.48
Usp3-202ENSMUST00000098613 Pak3Q61036 559 aa12.02□□□□□ -0.49
Usp3-202ENSMUST00000098613 Ttbk1Q6PCN3 1308 aa12.02□□□□□ -0.49
Usp3-202ENSMUST00000098613 Fhad1A6PWD2 1420 aa12.02□□□□□ -0.49
Usp3-202ENSMUST00000098613 Mrs2Q5NCE8 434 aa12.01□□□□□ -0.49
Usp3-202ENSMUST00000098613 Ankrd36D3Z4K0 1415 aa12.01□□□□□ -0.49
Usp3-202ENSMUST00000098613 Wwc2Q6NXJ0 1187 aa12□□□□□ -0.49
Usp3-202ENSMUST00000098613 Slc4a3P16283 1227 aa11.99□□□□□ -0.49
Usp3-202ENSMUST00000098613 Mia2Q91ZV0 1396 aa11.98□□□□□ -0.49
Usp3-202ENSMUST00000098613 Fyco1Q8VDC1 1437 aa11.98□□□□□ -0.49
Usp3-202ENSMUST00000098613 CntlnA2AM05 1397 aa11.98□□□□□ -0.49
Usp3-202ENSMUST00000098613 Vps8Q0P5W1 1427 aa11.98□□□□□ -0.49
Usp3-202ENSMUST00000098613 Washc2Q6PGL7 1334 aa11.97□□□□□ -0.49
Usp3-202ENSMUST00000098613 Naip5Q9R016 1403 aa11.97□□□□□ -0.49
Usp3-202ENSMUST00000098613 Naip2Q9QUK4 1447 aa11.97□□□□□ -0.49
Usp3-202ENSMUST00000098613 Ccer2J3QPU5 274 aa11.96□□□□□ -0.49
Usp3-202ENSMUST00000098613 Slc4a2P13808 1237 aaKnown RBP11.96□□□□□ -0.5
Usp3-202ENSMUST00000098613 Peg3Q3URU2 1571 aa11.95□□□□□ -0.5
Usp3-202ENSMUST00000098613 Gm7298A0A0N4SVU1 1476 aa11.95□□□□□ -0.5
Usp3-202ENSMUST00000098613 Ncoa2Q61026 1462 aa11.95□□□□□ -0.5
Usp3-202ENSMUST00000098613 Aebp1Q640N1 1128 aa11.95□□□□□ -0.5
Usp3-202ENSMUST00000098613 A2mQ6GQT1 1474 aa11.93□□□□□ -0.5
Usp3-202ENSMUST00000098613 Rtl5Q5DTT4 599 aa11.93□□□□□ -0.5
Usp3-202ENSMUST00000098613 Liat1Q810M6 228 aa11.93□□□□□ -0.5
Usp3-202ENSMUST00000098613 Exoc6Q8R313 802 aa11.93□□□□□ -0.5
Usp3-202ENSMUST00000098613 Efcab5A0JP43 1406 aa11.93□□□□□ -0.5
Usp3-202ENSMUST00000098613 Pelp1Q9DBD5 1123 aaKnown RBP11.92□□□□□ -0.5
Usp3-202ENSMUST00000098613 Dennd4bQ3U1Y4 1499 aa11.92□□□□□ -0.5
Usp3-202ENSMUST00000098613 Carmil1Q6EDY6 1374 aa11.91□□□□□ -0.5
Usp3-202ENSMUST00000098613 Gm1043A0A140LJC2 1431 aa11.91□□□□□ -0.5
Usp3-202ENSMUST00000098613 Crocc2F6XLV1 1638 aa11.9□□□□□ -0.5
Usp3-202ENSMUST00000098613 Kcnh8P59111 1102 aa11.9□□□□□ -0.51
Usp3-202ENSMUST00000098613 NrdcQ8BHG1 1161 aa11.89□□□□□ -0.51
Usp3-202ENSMUST00000098613 Urb2E9Q7L1 1524 aaKnown RBP11.89□□□□□ -0.51
Usp3-202ENSMUST00000098613 Ccnb3Q810T2 1396 aa11.88□□□□□ -0.51
Usp3-202ENSMUST00000098613 Zfp644E9QA22 1323 aa11.88□□□□□ -0.51
Usp3-202ENSMUST00000098613 Mphosph9A6H5Y1 991 aa11.87□□□□□ -0.51
Usp3-202ENSMUST00000098613 Egfem1Q8C088 590 aa11.87□□□□□ -0.51
Usp3-202ENSMUST00000098613 Npm1Q61937 292 aaKnown RBP11.86□□□□□ -0.51
Usp3-202ENSMUST00000098613 Camsap2Q8C1B1 1461 aa11.86□□□□□ -0.51
Usp3-202ENSMUST00000098613 Pprc1Q6NZN1 1644 aa11.84□□□□□ -0.51
Usp3-202ENSMUST00000098613 Cux2P70298 1426 aa11.84□□□□□ -0.51
Usp3-202ENSMUST00000098613 Cul7Q8VE73 1689 aa11.83□□□□□ -0.52
Usp3-202ENSMUST00000098613 Usp47Q8BY87 1376 aa11.82□□□□□ -0.52
Usp3-202ENSMUST00000098613 SynmQ70IV5 1561 aa11.82□□□□□ -0.52
Usp3-202ENSMUST00000098613 PogzQ8BZH4 1409 aaKnown RBP11.81□□□□□ -0.52
Usp3-202ENSMUST00000098613 Arhgap27A2AB59 869 aa11.81□□□□□ -0.52
Usp3-202ENSMUST00000098613 Ncoa1P70365 1447 aa11.81□□□□□ -0.52
Usp3-202ENSMUST00000098613 Duox2A2AQ99 1517 aa11.81□□□□□ -0.52
Usp3-202ENSMUST00000098613 Gm13695A2AK44 830 aa11.81□□□□□ -0.52
Usp3-202ENSMUST00000098613 Phldb1Q6PDH0 1371 aaKnown RBP11.81□□□□□ -0.52
Usp3-202ENSMUST00000098613 Thoc2B1AZI6 1594 aaKnown RBP11.81□□□□□ -0.52
Usp3-202ENSMUST00000098613 Pkd2O35245 966 aa11.8□□□□□ -0.52
Usp3-202ENSMUST00000098613 Cabp1Q9JLK7 227 aa11.8□□□□□ -0.52
Usp3-202ENSMUST00000098613 Samd9lQ69Z37 1561 aa11.8□□□□□ -0.52
Usp3-202ENSMUST00000098613 Polr1aO35134 1717 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 254.5 ms