RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

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Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Efcab5A0JP43 1406 aa12.28□□□□□ -0.44
Syne1-202ENSMUST00000095899 Samd9lQ69Z37 1561 aa12.27□□□□□ -0.44
Syne1-202ENSMUST00000095899 Duox2A2AQ99 1517 aa12.27□□□□□ -0.44
Syne1-202ENSMUST00000095899 Dhx29Q6PGC1 1365 aaKnown RBP12.27□□□□□ -0.44
Syne1-202ENSMUST00000095899 Naip1Q9QWK5 1403 aa12.27□□□□□ -0.45
Syne1-202ENSMUST00000095899 Npm1Q61937 292 aaKnown RBP12.27□□□□□ -0.45
Syne1-202ENSMUST00000095899 Gpatch8A2A6A1 1505 aa12.27□□□□□ -0.45
Syne1-202ENSMUST00000095899 Urb2E9Q7L1 1524 aaKnown RBP12.25□□□□□ -0.45
Syne1-202ENSMUST00000095899 Peg3Q3URU2 1571 aa12.25□□□□□ -0.45
Syne1-202ENSMUST00000095899 Plekhg3Q4VAC9 1341 aa12.25□□□□□ -0.45
Syne1-202ENSMUST00000095899 Eif4g3Q80XI3 1579 aaKnown RBP12.25□□□□□ -0.45
Syne1-202ENSMUST00000095899 Pbrm1Q8BSQ9 1634 aaKnown RBP12.24□□□□□ -0.45
Syne1-202ENSMUST00000095899 Sall2Q9QX96 1004 aa12.24□□□□□ -0.45
Syne1-202ENSMUST00000095899 Setd5Q5XJV7 1441 aa12.23□□□□□ -0.45
Syne1-202ENSMUST00000095899 Las1lA2BE28 776 aaKnown RBP12.22□□□□□ -0.45
Syne1-202ENSMUST00000095899 Neurod1Q60867 357 aa12.22□□□□□ -0.45
Syne1-202ENSMUST00000095899 Zeb1Q64318 1117 aa12.22□□□□□ -0.45
Syne1-202ENSMUST00000095899 SynmQ70IV5 1561 aa12.21□□□□□ -0.45
Syne1-202ENSMUST00000095899 Plb1Q3TTY0 1478 aa12.2□□□□□ -0.46
Syne1-202ENSMUST00000095899 Il27Q8K3I6 234 aa12.19□□□□□ -0.46
Syne1-202ENSMUST00000095899 Aebp2Q9Z248 504 aaKnown RBP12.18□□□□□ -0.46
Syne1-202ENSMUST00000095899 Carmil1Q6EDY6 1374 aa12.17□□□□□ -0.46
Syne1-202ENSMUST00000095899 3425401B19RikD3Z1D3 1412 aa12.16□□□□□ -0.46
Syne1-202ENSMUST00000095899 Ift140E9PY46 1464 aa12.15□□□□□ -0.46
Syne1-202ENSMUST00000095899 Gm1043A0A140LJC2 1431 aa12.13□□□□□ -0.47
Syne1-202ENSMUST00000095899 Disp1Q3TDN0 1521 aa12.12□□□□□ -0.47
Syne1-202ENSMUST00000095899 Magi3Q9EQJ9 1476 aa12.12□□□□□ -0.47
Syne1-202ENSMUST00000095899 Pla2r1Q62028 1487 aa12.11□□□□□ -0.47
Syne1-202ENSMUST00000095899 Rusc2Q80U22 1514 aa12.1□□□□□ -0.47
Syne1-202ENSMUST00000095899 Abca5Q8K448 1642 aa12.1□□□□□ -0.47
Syne1-202ENSMUST00000095899 BlmO88700 1416 aa12.1□□□□□ -0.47
Syne1-202ENSMUST00000095899 Polr1aO35134 1717 aaKnown RBP12.09□□□□□ -0.47
Syne1-202ENSMUST00000095899 CntlnA2AM05 1397 aa12.09□□□□□ -0.47
Syne1-202ENSMUST00000095899 Nup160Q9Z0W3 1402 aaKnown RBP12.09□□□□□ -0.47
Syne1-202ENSMUST00000095899 Myt1Q8CFC2 1127 aa12.08□□□□□ -0.48
Syne1-202ENSMUST00000095899 Rad54l2Q99NG0 1466 aa12.08□□□□□ -0.48
Syne1-202ENSMUST00000095899 Fyco1Q8VDC1 1437 aa12.08□□□□□ -0.48
Syne1-202ENSMUST00000095899 Grin2aP35436 1464 aa12.06□□□□□ -0.48
Syne1-202ENSMUST00000095899 Dennd4bQ3U1Y4 1499 aa12.05□□□□□ -0.48
Syne1-202ENSMUST00000095899 Ap3b1Q9Z1T1 1105 aa12.05□□□□□ -0.48
Syne1-202ENSMUST00000095899 Adamts12Q811B3 1600 aa12.05□□□□□ -0.48
Syne1-202ENSMUST00000095899 Lmtk2Q3TYD6 1471 aa12.04□□□□□ -0.48
Syne1-202ENSMUST00000095899 Gm7298A0A0N4SVU1 1476 aa12.03□□□□□ -0.48
Syne1-202ENSMUST00000095899 EprsQ8CGC7 1512 aaKnown RBP12.03□□□□□ -0.48
Syne1-202ENSMUST00000095899 Rpap1Q80TE0 1409 aa12.02□□□□□ -0.48
Syne1-202ENSMUST00000095899 Abca16E9PWJ7 1678 aa12.02□□□□□ -0.48
Syne1-202ENSMUST00000095899 TonslQ6NZL6 1363 aa12.02□□□□□ -0.49
Syne1-202ENSMUST00000095899 ClspnQ80YR7 1315 aa12□□□□□ -0.49
Syne1-202ENSMUST00000095899 Naip2Q9QUK4 1447 aa12□□□□□ -0.49
Syne1-202ENSMUST00000095899 WizO88286 1684 aaKnown RBP11.99□□□□□ -0.49
Syne1-202ENSMUST00000095899 Gcc2Q8CHG3 1679 aa11.99□□□□□ -0.49
Syne1-202ENSMUST00000095899 Cul7Q8VE73 1689 aa11.99□□□□□ -0.49
Syne1-202ENSMUST00000095899 Fhod3Q76LL6 1578 aa11.98□□□□□ -0.49
Syne1-202ENSMUST00000095899 Cc2d2bA0A286YDU8 1405 aa11.98□□□□□ -0.49
Syne1-202ENSMUST00000095899 1700123L14RikQ3V2K7 440 aa11.98□□□□□ -0.49
Syne1-202ENSMUST00000095899 CadpsQ80TJ1 1355 aa11.98□□□□□ -0.49
Syne1-202ENSMUST00000095899 Fhad1A6PWD2 1420 aa11.97□□□□□ -0.49
Syne1-202ENSMUST00000095899 Aebp1Q640N1 1128 aa11.97□□□□□ -0.49
Syne1-202ENSMUST00000095899 A2mQ6GQT1 1474 aa11.97□□□□□ -0.49
Syne1-202ENSMUST00000095899 CenpbP27790 599 aa11.95□□□□□ -0.5
Syne1-202ENSMUST00000095899 Vps8Q0P5W1 1427 aa11.94□□□□□ -0.5
Syne1-202ENSMUST00000095899 Setbp1Q9Z180 1582 aa11.92□□□□□ -0.5
Syne1-202ENSMUST00000095899 Abcc2Q8VI47 1543 aa11.92□□□□□ -0.5
Syne1-202ENSMUST00000095899 Anks4bQ8K3X6 423 aa11.92□□□□□ -0.5
Syne1-202ENSMUST00000095899 PxdnQ3UQ28 1475 aa11.92□□□□□ -0.5
Syne1-202ENSMUST00000095899 BC005561E9Q5E2 1589 aa11.92□□□□□ -0.5
Syne1-202ENSMUST00000095899 Soga1E1U8D0 1418 aa11.91□□□□□ -0.5
Syne1-202ENSMUST00000095899 Ankrd36D3Z4K0 1415 aa11.91□□□□□ -0.5
Syne1-202ENSMUST00000095899 UacaQ8CGB3 1411 aa11.9□□□□□ -0.5
Syne1-202ENSMUST00000095899 Dnmt1P13864 1620 aaKnown RBP11.9□□□□□ -0.5
Syne1-202ENSMUST00000095899 Zcchc11B2RX14 1644 aaKnown RBP11.88□□□□□ -0.51
Syne1-202ENSMUST00000095899 Map3k4O08648 1597 aa11.88□□□□□ -0.51
Syne1-202ENSMUST00000095899 Eid3Q3V124 375 aa11.88□□□□□ -0.51
Syne1-202ENSMUST00000095899 Cdc42bpaQ3UU96 1719 aa11.88□□□□□ -0.51
Syne1-202ENSMUST00000095899 NexmifQ5DTT1 1515 aa11.88□□□□□ -0.51
Syne1-202ENSMUST00000095899 Mia2Q91ZV0 1396 aa11.86□□□□□ -0.51
Syne1-202ENSMUST00000095899 Camsap2Q8C1B1 1461 aa11.85□□□□□ -0.51
Syne1-202ENSMUST00000095899 Chd1P40201 1711 aa11.85□□□□□ -0.51
Syne1-202ENSMUST00000095899 Ccnb3Q810T2 1396 aa11.84□□□□□ -0.51
Syne1-202ENSMUST00000095899 Kdm6bQ5NCY0 1641 aa11.84□□□□□ -0.51
Syne1-202ENSMUST00000095899 Wdr66E9Q743 1299 aa11.84□□□□□ -0.51
Syne1-202ENSMUST00000095899 Lmod2Q3UHZ5 550 aa11.84□□□□□ -0.51
Syne1-202ENSMUST00000095899 Arhgef11Q68FM7 1552 aa11.83□□□□□ -0.52
Syne1-202ENSMUST00000095899 Kif21bQ9QXL1 1668 aa11.82□□□□□ -0.52
Syne1-202ENSMUST00000095899 Shroom2A2ALU4 1481 aa11.82□□□□□ -0.52
Syne1-202ENSMUST00000095899 Rapgef6Q5NCJ1 1609 aa11.82□□□□□ -0.52
Syne1-202ENSMUST00000095899 Ppargc1bQ8VHJ7 1014 aa11.82□□□□□ -0.52
Syne1-202ENSMUST00000095899 Kiaa1551Q5DTW7 1521 aa11.81□□□□□ -0.52
Syne1-202ENSMUST00000095899 Ncoa3O09000 1398 aa11.81□□□□□ -0.52
Syne1-202ENSMUST00000095899 SphkapQ6NSW3 1687 aa11.81□□□□□ -0.52
Syne1-202ENSMUST00000095899 Arhgef40Q3UPH7 1517 aa11.8□□□□□ -0.52
Syne1-202ENSMUST00000095899 Naip5Q9R016 1403 aa11.8□□□□□ -0.52
Syne1-202ENSMUST00000095899 Csrnp3P59055 597 aa11.8□□□□□ -0.52
Syne1-202ENSMUST00000095899 Ncoa2Q61026 1462 aa11.79□□□□□ -0.52
Syne1-202ENSMUST00000095899 Aplp2Q06335 707 aa11.79□□□□□ -0.52
Syne1-202ENSMUST00000095899 Rfx7F8VPJ6 1459 aa11.79□□□□□ -0.52
Syne1-202ENSMUST00000095899 Mug1P28665 1476 aa11.78□□□□□ -0.52
Syne1-202ENSMUST00000095899 Kif27Q7M6Z4 1394 aa11.77□□□□□ -0.52
Syne1-202ENSMUST00000095899 Mroh2aD3Z750 1679 aa11.77□□□□□ -0.53
Syne1-202ENSMUST00000095899 Lamc1P02468 1607 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 113.4 ms