RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 DiexfQ8BTT6 772 aaKnown RBP13.44□□□□□ -0.26
Smarca1-202ENSMUST00000088973 Wdr43Q6ZQL4 677 aaKnown RBP13.43□□□□□ -0.26
Smarca1-202ENSMUST00000088973 Rgl3Q3UYI5 709 aa13.42□□□□□ -0.26
Smarca1-202ENSMUST00000088973 Golga3P55937 1487 aa13.34□□□□□ -0.27
Smarca1-202ENSMUST00000088973 Kif15Q6P9L6 1387 aa13.34□□□□□ -0.27
Smarca1-202ENSMUST00000088973 NacadQ5SWP3 1504 aa13.31□□□□□ -0.28
Smarca1-202ENSMUST00000088973 Grwd1Q810D6 446 aaKnown RBP13.31□□□□□ -0.28
Smarca1-202ENSMUST00000088973 P3h3Q8CG70 732 aa13.31□□□□□ -0.28
Smarca1-202ENSMUST00000088973 Trim26Q99PN3 545 aa13.3□□□□□ -0.28
Smarca1-202ENSMUST00000088973 Rsf1E9PWW9 1441 aaKnown RBP13.29□□□□□ -0.28
Smarca1-202ENSMUST00000088973 Eea1Q8BL66 1411 aa13.28□□□□□ -0.28
Smarca1-202ENSMUST00000088973 Kdm2aP59997 1161 aa13.27□□□□□ -0.28
Smarca1-202ENSMUST00000088973 Ofd1Q80Z25 1017 aa13.27□□□□□ -0.29
Smarca1-202ENSMUST00000088973 Safb2Q80YR5 991 aaKnown RBP13.25□□□□□ -0.29
Smarca1-202ENSMUST00000088973 1700123L14RikQ3V2K7 440 aa13.24□□□□□ -0.29
Smarca1-202ENSMUST00000088973 Fgd1P52734 960 aa13.23□□□□□ -0.29
Smarca1-202ENSMUST00000088973 Baz1aO88379 1555 aa13.22□□□□□ -0.29
Smarca1-202ENSMUST00000088973 Trim30dE9PWL0 497 aa13.22□□□□□ -0.29
Smarca1-202ENSMUST00000088973 Arhgap27A2AB59 869 aa13.21□□□□□ -0.29
Smarca1-202ENSMUST00000088973 Mroh3A0A1D5RM54 893 aa13.21□□□□□ -0.29
Smarca1-202ENSMUST00000088973 CanxP35564 591 aaKnown RBP13.21□□□□□ -0.29
Smarca1-202ENSMUST00000088973 Card11Q8CIS0 1159 aa13.2□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Vsig10D3YX43 558 aa13.19□□□□□ -0.3
Smarca1-202ENSMUST00000088973 DekQ7TNV0 380 aaKnown RBP13.19□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Apbb1Q9QXJ1 710 aa13.17□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Fam71e1A1L3C1 212 aa13.16□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Rrp7aQ9D1C9 280 aaKnown RBP13.16□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Ccdc18Q640L5 1455 aa13.15□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Srpk2O54781 681 aaKnown RBP13.15□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Hsp90ab1P11499 724 aaKnown RBP13.15□□□□□ -0.3
Smarca1-202ENSMUST00000088973 Irx6Q9ER75 438 aa13.15□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Cwc22Q8C5N3 908 aaKnown RBP13.14□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Gm20521D3Z5F7 333 aa13.14□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Neurod2Q62414 383 aa13.14□□□□□ -0.31
Smarca1-202ENSMUST00000088973 IqubQ8CDK3 788 aa13.14□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Hspa5P20029 655 aaKnown RBP13.13□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Hsp90aa1P07901 733 aaKnown RBP13.13□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Exosc9Q9JHI7 438 aaKnown RBP13.12□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Mtus2Q3UHD3 1353 aa13.11□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Arid4bA2CG63 1314 aaKnown RBP13.1□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Wwc2Q6NXJ0 1187 aa13.09□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Ythdc1E9Q5K9 736 aaKnown RBP13.08□□□□□ -0.31
Smarca1-202ENSMUST00000088973 Stk24Q99KH8 431 aa13.07□□□□□ -0.32
Smarca1-202ENSMUST00000088973 SafbD3YXK2 937 aaKnown RBP13.05□□□□□ -0.32
Smarca1-202ENSMUST00000088973 Mia2Q91ZV0 1396 aa13.05□□□□□ -0.32
Smarca1-202ENSMUST00000088973 Ercc6F8VPZ5 1481 aa13.05□□□□□ -0.32
Smarca1-202ENSMUST00000088973 Mapk8ip3Q9ESN9 1337 aa13.04□□□□□ -0.32
Smarca1-202ENSMUST00000088973 Ccdc9Q8VC31 543 aaKnown RBP13.04□□□□□ -0.32
Smarca1-202ENSMUST00000088973 Trim44Q9QXA7 346 aa13.03□□□□□ -0.32
Smarca1-202ENSMUST00000088973 Dbr1Q923B1 550 aa13.03□□□□□ -0.32
Smarca1-202ENSMUST00000088973 Ccdc88bQ4QRL3 1481 aa13.02□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Lmod3E9QA62 571 aa13.02□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Gm6268A2A3U9 297 aa13.01□□□□□ -0.33
Smarca1-202ENSMUST00000088973 CatipB9EKE5 520 aa13.01□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Pkd2O35245 966 aa13□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Stag3O70576 1240 aa13□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Cnga1P29974 684 aa13□□□□□ -0.33
Smarca1-202ENSMUST00000088973 NgefQ8CHT1 710 aa12.99□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Sin3aQ60520 1274 aaKnown RBP12.99□□□□□ -0.33
Smarca1-202ENSMUST00000088973 1700019A02RikA0A087WPV9 146 aa12.98□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Plcb2A3KGF7 1181 aa12.98□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Slc4a3P16283 1227 aa12.98□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Map4P27546 1125 aaKnown RBP12.98□□□□□ -0.33
Smarca1-202ENSMUST00000088973 B4galnt3Q6L8S8 986 aa12.98□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Armcx1Q9CX83 456 aa12.98□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Kdm5dQ62240 1548 aa12.97□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Kif27Q7M6Z4 1394 aa12.97□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Cep162Q6ZQ06 1403 aa12.97□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Ppm1gQ61074 542 aa12.96□□□□□ -0.33
Smarca1-202ENSMUST00000088973 Htatsf1Q8BGC0 757 aa12.95□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Rundc1Q0VDN7 615 aa12.95□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Aebp1Q640N1 1128 aa12.95□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Ccdc27Q3V036 639 aa12.94□□□□□ -0.34
Smarca1-202ENSMUST00000088973 PtmaP26350 111 aa12.92□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Cabp1Q9JLK7 227 aa12.92□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Trak1Q6PD31 939 aa12.92□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Exoc6Q8R313 802 aa12.92□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Rtn4Q99P72 1162 aaKnown RBP12.91□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Rwdd1Q9CQK7 243 aa12.91□□□□□ -0.34
Smarca1-202ENSMUST00000088973 NudcO35685 332 aaKnown RBP12.9□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Iqcf3Q9D498 203 aa12.9□□□□□ -0.34
Smarca1-202ENSMUST00000088973 Arid3cA6PWV5 409 aa12.89□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Ifit1bl1D3Z6F0 470 aa12.89□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Chmp4bQ9D8B3 224 aaKnown RBP12.88□□□□□ -0.35
Smarca1-202ENSMUST00000088973 MyclP10166 368 aa12.88□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Map7O88735 730 aa12.88□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Mphosph9A6H5Y1 991 aa12.87□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Chmp5Q9D7S9 219 aa12.87□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Spryd3E9Q9B3 442 aa12.87□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Speer4f1Q9D5Q6 258 aa12.87□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Ecm2Q5FW85 670 aa12.86□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Zscan21Q07231 555 aa12.86□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Tcerg1Q8CGF7 1100 aaKnown RBP12.86□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Supt16hQ920B9 1047 aa12.86□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Fmn1Q05860 1466 aa12.86□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Stk26Q99JT2 416 aa12.84□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Gtf2e1Q9D0D5 440 aa12.84□□□□□ -0.35
Smarca1-202ENSMUST00000088973 Zfp777B9EKF4 885 aa12.83□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Hsp90b1P08113 802 aaKnown RBP12.83□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Fhad1A6PWD2 1420 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms