RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Ankrd26Q811D2 1581 aa15.46■□□□□ 0.07
Tro-201ENSMUST00000087253 Crocc2F6XLV1 1638 aa15.45■□□□□ 0.06
Tro-201ENSMUST00000087253 Lmo7E9PYF4 1699 aaKnown RBP15.45■□□□□ 0.06
Tro-201ENSMUST00000087253 SynmQ70IV5 1561 aa15.44■□□□□ 0.06
Tro-201ENSMUST00000087253 TonslQ6NZL6 1363 aa15.44■□□□□ 0.06
Tro-201ENSMUST00000087253 Gm38655A0A286YDK6 273 aa15.43■□□□□ 0.06
Tro-201ENSMUST00000087253 Plekhg3Q4VAC9 1341 aa15.43■□□□□ 0.06
Tro-201ENSMUST00000087253 Arhgef5E9Q7D5 1581 aa15.41■□□□□ 0.06
Tro-201ENSMUST00000087253 Dnajc5bQ9CQ94 199 aa15.4■□□□□ 0.06
Tro-201ENSMUST00000087253 Arap1Q4LDD4 1452 aa15.4■□□□□ 0.06
Tro-201ENSMUST00000087253 Dhx29Q6PGC1 1365 aaKnown RBP15.37■□□□□ 0.05
Tro-201ENSMUST00000087253 Setd1bQ8CFT2 1985 aa15.37■□□□□ 0.05
Tro-201ENSMUST00000087253 Peg3Q3URU2 1571 aa15.36■□□□□ 0.05
Tro-201ENSMUST00000087253 Pbrm1Q8BSQ9 1634 aaKnown RBP15.35■□□□□ 0.05
Tro-201ENSMUST00000087253 Clip1Q922J3 1391 aa15.33■□□□□ 0.04
Tro-201ENSMUST00000087253 Tiam1Q60610 1591 aa15.32■□□□□ 0.04
Tro-201ENSMUST00000087253 Urb2E9Q7L1 1524 aaKnown RBP15.32■□□□□ 0.04
Tro-201ENSMUST00000087253 Magi3Q9EQJ9 1476 aa15.32■□□□□ 0.04
Tro-201ENSMUST00000087253 Carmil1Q6EDY6 1374 aa15.32■□□□□ 0.04
Tro-201ENSMUST00000087253 Polr1aO35134 1717 aaKnown RBP15.31■□□□□ 0.04
Tro-201ENSMUST00000087253 Cux1P53564 1515 aa15.31■□□□□ 0.04
Tro-201ENSMUST00000087253 Eea1Q8BL66 1411 aa15.3■□□□□ 0.04
Tro-201ENSMUST00000087253 Pcf11G3X9Z4 1553 aa15.3■□□□□ 0.04
Tro-201ENSMUST00000087253 Aplp2Q06335 707 aa15.29■□□□□ 0.04
Tro-201ENSMUST00000087253 Pla2r1Q62028 1487 aa15.29■□□□□ 0.04
Tro-201ENSMUST00000087253 CenpbP27790 599 aa15.29■□□□□ 0.04
Tro-201ENSMUST00000087253 Abca5Q8K448 1642 aa15.27■□□□□ 0.04
Tro-201ENSMUST00000087253 Npm1Q61937 292 aaKnown RBP15.27■□□□□ 0.03
Tro-201ENSMUST00000087253 Lrriq1Q0P5X1 1673 aa15.26■□□□□ 0.03
Tro-201ENSMUST00000087253 Adamts12Q811B3 1600 aa15.26■□□□□ 0.03
Tro-201ENSMUST00000087253 EprsQ8CGC7 1512 aaKnown RBP15.25■□□□□ 0.03
Tro-201ENSMUST00000087253 Eid3Q3V124 375 aa15.25■□□□□ 0.03
Tro-201ENSMUST00000087253 Ap3b1Q9Z1T1 1105 aa15.24■□□□□ 0.03
Tro-201ENSMUST00000087253 Disp1Q3TDN0 1521 aa15.24■□□□□ 0.03
Tro-201ENSMUST00000087253 Rpap1Q80TE0 1409 aa15.23■□□□□ 0.03
Tro-201ENSMUST00000087253 TchhA0A0B4J1F9 1599 aa15.23■□□□□ 0.03
Tro-201ENSMUST00000087253 Slx4Q6P1D7 1565 aa15.22■□□□□ 0.03
Tro-201ENSMUST00000087253 Ncapd3Q6ZQK0 1506 aa15.22■□□□□ 0.03
Tro-201ENSMUST00000087253 Il27Q8K3I6 234 aa15.21■□□□□ 0.03
Tro-201ENSMUST00000087253 Plb1Q3TTY0 1478 aa15.21■□□□□ 0.03
Tro-201ENSMUST00000087253 Nup160Q9Z0W3 1402 aaKnown RBP15.2■□□□□ 0.02
Tro-201ENSMUST00000087253 Grin2aP35436 1464 aa15.19■□□□□ 0.02
Tro-201ENSMUST00000087253 Rad54l2Q99NG0 1466 aa15.19■□□□□ 0.02
Tro-201ENSMUST00000087253 Fyco1Q8VDC1 1437 aa15.19■□□□□ 0.02
Tro-201ENSMUST00000087253 Naip1Q9QWK5 1403 aa15.18■□□□□ 0.02
Tro-201ENSMUST00000087253 Kdm5bQ80Y84 1544 aa15.18■□□□□ 0.02
Tro-201ENSMUST00000087253 BlmO88700 1416 aa15.18■□□□□ 0.02
Tro-201ENSMUST00000087253 Ift140E9PY46 1464 aa15.17■□□□□ 0.02
Tro-201ENSMUST00000087253 Abca16E9PWJ7 1678 aa15.16■□□□□ 0.02
Tro-201ENSMUST00000087253 Setd5Q5XJV7 1441 aa15.15■□□□□ 0.02
Tro-201ENSMUST00000087253 Mapk8ip2Q9ERE9 830 aa15.15■□□□□ 0.02
Tro-201ENSMUST00000087253 WizO88286 1684 aaKnown RBP15.12■□□□□ 0.01
Tro-201ENSMUST00000087253 CntlnA2AM05 1397 aa15.1■□□□□ 0.01
Tro-201ENSMUST00000087253 Eif4g3Q80XI3 1579 aaKnown RBP15.09■□□□□ 0.01
Tro-201ENSMUST00000087253 Gm1043A0A140LJC2 1431 aa15.08■□□□□ 0.01
Tro-201ENSMUST00000087253 Soga1E1U8D0 1418 aa15.07■□□□□ 0
Tro-201ENSMUST00000087253 Abcc2Q8VI47 1543 aa15.07■□□□□ 0
Tro-201ENSMUST00000087253 Hnrnpul2Q00PI9 745 aaKnown RBP15.06■□□□□ 0
Tro-201ENSMUST00000087253 CadpsQ80TJ1 1355 aa15.06■□□□□ 0
Tro-201ENSMUST00000087253 SafbD3YXK2 937 aaKnown RBP15.06■□□□□ 0
Tro-201ENSMUST00000087253 Gm7298A0A0N4SVU1 1476 aa15.04■□□□□ -0
Tro-201ENSMUST00000087253 Rusc2Q80U22 1514 aa15.04■□□□□ -0
Tro-201ENSMUST00000087253 Lmtk2Q3TYD6 1471 aa15.03■□□□□ -0
Tro-201ENSMUST00000087253 Gcc2Q8CHG3 1679 aa15.01□□□□□ -0.01
Tro-201ENSMUST00000087253 PxdnQ3UQ28 1475 aa15.01□□□□□ -0.01
Tro-201ENSMUST00000087253 Zcchc11B2RX14 1644 aaKnown RBP14.99□□□□□ -0.01
Tro-201ENSMUST00000087253 Cc2d2bA0A286YDU8 1405 aa14.99□□□□□ -0.01
Tro-201ENSMUST00000087253 Myt1Q8CFC2 1127 aa14.99□□□□□ -0.01
Tro-201ENSMUST00000087253 Map3k4O08648 1597 aa14.98□□□□□ -0.01
Tro-201ENSMUST00000087253 Fam50aQ9WV03 339 aaKnown RBP14.97□□□□□ -0.01
Tro-201ENSMUST00000087253 Dnmt1P13864 1620 aaKnown RBP14.95□□□□□ -0.02
Tro-201ENSMUST00000087253 NclP09405 707 aaKnown RBP14.95□□□□□ -0.02
Tro-201ENSMUST00000087253 3425401B19RikD3Z1D3 1412 aa14.95□□□□□ -0.02
Tro-201ENSMUST00000087253 Fam71e1A1L3C1 212 aa14.94□□□□□ -0.02
Tro-201ENSMUST00000087253 Tnnt3Q9QZ47 272 aa14.94□□□□□ -0.02
Tro-201ENSMUST00000087253 Aebp1Q640N1 1128 aa14.91□□□□□ -0.02
Tro-201ENSMUST00000087253 Rapgef6Q5NCJ1 1609 aa14.91□□□□□ -0.02
Tro-201ENSMUST00000087253 Cdc42bpaQ3UU96 1719 aa14.9□□□□□ -0.02
Tro-201ENSMUST00000087253 Shroom2A2ALU4 1481 aa14.9□□□□□ -0.02
Tro-201ENSMUST00000087253 BC005561E9Q5E2 1589 aa14.89□□□□□ -0.03
Tro-201ENSMUST00000087253 Lmod2Q3UHZ5 550 aa14.89□□□□□ -0.03
Tro-201ENSMUST00000087253 Arhgef11Q68FM7 1552 aa14.88□□□□□ -0.03
Tro-201ENSMUST00000087253 Fhod3Q76LL6 1578 aa14.88□□□□□ -0.03
Tro-201ENSMUST00000087253 Kiaa1551Q5DTW7 1521 aa14.86□□□□□ -0.03
Tro-201ENSMUST00000087253 Slc24a1Q91WD8 1130 aa14.83□□□□□ -0.04
Tro-201ENSMUST00000087253 Naip2Q9QUK4 1447 aa14.82□□□□□ -0.04
Tro-201ENSMUST00000087253 Rrbp1Q99PL5 1605 aaKnown RBP14.82□□□□□ -0.04
Tro-201ENSMUST00000087253 NexmifQ5DTT1 1515 aa14.81□□□□□ -0.04
Tro-201ENSMUST00000087253 Dennd4bQ3U1Y4 1499 aa14.8□□□□□ -0.04
Tro-201ENSMUST00000087253 Mroh2aD3Z750 1679 aa14.8□□□□□ -0.04
Tro-201ENSMUST00000087253 Fhad1A6PWD2 1420 aa14.79□□□□□ -0.04
Tro-201ENSMUST00000087253 A2mQ6GQT1 1474 aa14.78□□□□□ -0.04
Tro-201ENSMUST00000087253 Cul7Q8VE73 1689 aa14.78□□□□□ -0.04
Tro-201ENSMUST00000087253 Ube2uB1AUC4 352 aa14.77□□□□□ -0.04
Tro-201ENSMUST00000087253 Stra8P70278 393 aa14.77□□□□□ -0.05
Tro-201ENSMUST00000087253 Vps8Q0P5W1 1427 aa14.76□□□□□ -0.05
Tro-201ENSMUST00000087253 Hspa5P20029 655 aaKnown RBP14.76□□□□□ -0.05
Tro-201ENSMUST00000087253 Mug1P28665 1476 aa14.76□□□□□ -0.05
Tro-201ENSMUST00000087253 Ncoa3O09000 1398 aa14.76□□□□□ -0.05
Tro-201ENSMUST00000087253 Mapkbp1Q6NS57 1503 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms