RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 SynmQ70IV5 1561 aa11.53□□□□□ -0.56
Trim40-201ENSMUST00000087158 Setd5Q5XJV7 1441 aa11.52□□□□□ -0.57
Trim40-201ENSMUST00000087158 Lrriq1Q0P5X1 1673 aa11.51□□□□□ -0.57
Trim40-201ENSMUST00000087158 Fam71e1A1L3C1 212 aa11.5□□□□□ -0.57
Trim40-201ENSMUST00000087158 Arap1Q4LDD4 1452 aa11.5□□□□□ -0.57
Trim40-201ENSMUST00000087158 Erich3F6QRE9 1637 aa11.5□□□□□ -0.57
Trim40-201ENSMUST00000087158 Arhgef5E9Q7D5 1581 aa11.48□□□□□ -0.57
Trim40-201ENSMUST00000087158 Ankrd26Q811D2 1581 aa11.48□□□□□ -0.57
Trim40-201ENSMUST00000087158 UbtfP25976 765 aaKnown RBP11.46□□□□□ -0.57
Trim40-201ENSMUST00000087158 Mier1Q5UAK0 511 aa11.46□□□□□ -0.57
Trim40-201ENSMUST00000087158 Rad54l2Q99NG0 1466 aa11.46□□□□□ -0.58
Trim40-201ENSMUST00000087158 Polr1aO35134 1717 aaKnown RBP11.46□□□□□ -0.58
Trim40-201ENSMUST00000087158 Plb1Q3TTY0 1478 aa11.45□□□□□ -0.58
Trim40-201ENSMUST00000087158 Cux1P53564 1515 aa11.44□□□□□ -0.58
Trim40-201ENSMUST00000087158 Plekhg3Q4VAC9 1341 aa11.44□□□□□ -0.58
Trim40-201ENSMUST00000087158 Urb2E9Q7L1 1524 aaKnown RBP11.43□□□□□ -0.58
Trim40-201ENSMUST00000087158 Rpap1Q80TE0 1409 aa11.42□□□□□ -0.58
Trim40-201ENSMUST00000087158 Fyco1Q8VDC1 1437 aa11.42□□□□□ -0.58
Trim40-201ENSMUST00000087158 Tiam1Q60610 1591 aa11.41□□□□□ -0.58
Trim40-201ENSMUST00000087158 Lmo7E9PYF4 1699 aaKnown RBP11.41□□□□□ -0.58
Trim40-201ENSMUST00000087158 Magi3Q9EQJ9 1476 aa11.41□□□□□ -0.58
Trim40-201ENSMUST00000087158 Pla2r1Q62028 1487 aa11.41□□□□□ -0.58
Trim40-201ENSMUST00000087158 Pcf11G3X9Z4 1553 aa11.4□□□□□ -0.58
Trim40-201ENSMUST00000087158 Disp1Q3TDN0 1521 aa11.4□□□□□ -0.58
Trim40-201ENSMUST00000087158 Grin2aP35436 1464 aa11.39□□□□□ -0.59
Trim40-201ENSMUST00000087158 NefmP08553 848 aa11.39□□□□□ -0.59
Trim40-201ENSMUST00000087158 Ap3b1Q9Z1T1 1105 aa11.39□□□□□ -0.59
Trim40-201ENSMUST00000087158 Ift140E9PY46 1464 aa11.38□□□□□ -0.59
Trim40-201ENSMUST00000087158 Naip1Q9QWK5 1403 aa11.38□□□□□ -0.59
Trim40-201ENSMUST00000087158 EprsQ8CGC7 1512 aaKnown RBP11.38□□□□□ -0.59
Trim40-201ENSMUST00000087158 CntlnA2AM05 1397 aa11.37□□□□□ -0.59
Trim40-201ENSMUST00000087158 Pbrm1Q8BSQ9 1634 aaKnown RBP11.36□□□□□ -0.59
Trim40-201ENSMUST00000087158 Supt5hO55201 1082 aaKnown RBP11.36□□□□□ -0.59
Trim40-201ENSMUST00000087158 Setd1bQ8CFT2 1985 aa11.36□□□□□ -0.59
Trim40-201ENSMUST00000087158 Gpatch8A2A6A1 1505 aa11.35□□□□□ -0.59
Trim40-201ENSMUST00000087158 BlmO88700 1416 aa11.33□□□□□ -0.6
Trim40-201ENSMUST00000087158 Nup160Q9Z0W3 1402 aaKnown RBP11.33□□□□□ -0.6
Trim40-201ENSMUST00000087158 Peg3Q3URU2 1571 aa11.33□□□□□ -0.6
Trim40-201ENSMUST00000087158 Slx4Q6P1D7 1565 aa11.33□□□□□ -0.6
Trim40-201ENSMUST00000087158 Adamts12Q811B3 1600 aa11.33□□□□□ -0.6
Trim40-201ENSMUST00000087158 Aebp1Q640N1 1128 aa11.32□□□□□ -0.6
Trim40-201ENSMUST00000087158 Ncapd3Q6ZQK0 1506 aa11.32□□□□□ -0.6
Trim40-201ENSMUST00000087158 CadpsQ80TJ1 1355 aa11.32□□□□□ -0.6
Trim40-201ENSMUST00000087158 Abca5Q8K448 1642 aa11.31□□□□□ -0.6
Trim40-201ENSMUST00000087158 Trap1aP19473 224 aa11.3□□□□□ -0.6
Trim40-201ENSMUST00000087158 Gm7298A0A0N4SVU1 1476 aa11.3□□□□□ -0.6
Trim40-201ENSMUST00000087158 WizO88286 1684 aaKnown RBP11.29□□□□□ -0.6
Trim40-201ENSMUST00000087158 Eif4g3Q80XI3 1579 aaKnown RBP11.29□□□□□ -0.6
Trim40-201ENSMUST00000087158 Cc2d2bA0A286YDU8 1405 aa11.28□□□□□ -0.6
Trim40-201ENSMUST00000087158 TchhA0A0B4J1F9 1599 aa11.26□□□□□ -0.61
Trim40-201ENSMUST00000087158 Soga1E1U8D0 1418 aa11.26□□□□□ -0.61
Trim40-201ENSMUST00000087158 Abca16E9PWJ7 1678 aa11.25□□□□□ -0.61
Trim40-201ENSMUST00000087158 Gm1043A0A140LJC2 1431 aa11.24□□□□□ -0.61
Trim40-201ENSMUST00000087158 PxdnQ3UQ28 1475 aa11.23□□□□□ -0.61
Trim40-201ENSMUST00000087158 Lmod2Q3UHZ5 550 aa11.23□□□□□ -0.61
Trim40-201ENSMUST00000087158 Shroom2A2ALU4 1481 aa11.21□□□□□ -0.61
Trim40-201ENSMUST00000087158 Rusc2Q80U22 1514 aa11.21□□□□□ -0.61
Trim40-201ENSMUST00000087158 Kif27Q7M6Z4 1394 aa11.2□□□□□ -0.62
Trim40-201ENSMUST00000087158 Neurod1Q60867 357 aa11.19□□□□□ -0.62
Trim40-201ENSMUST00000087158 Pelp1Q9DBD5 1123 aaKnown RBP11.17□□□□□ -0.62
Trim40-201ENSMUST00000087158 Abcc2Q8VI47 1543 aa11.17□□□□□ -0.62
Trim40-201ENSMUST00000087158 Kdm5bQ80Y84 1544 aa11.17□□□□□ -0.62
Trim40-201ENSMUST00000087158 WrnO09053 1401 aa11.17□□□□□ -0.62
Trim40-201ENSMUST00000087158 3425401B19RikD3Z1D3 1412 aa11.16□□□□□ -0.62
Trim40-201ENSMUST00000087158 Arhgap27A2AB59 869 aa11.16□□□□□ -0.62
Trim40-201ENSMUST00000087158 Pabpn1Q8CCS6 302 aaKnown RBP11.16□□□□□ -0.62
Trim40-201ENSMUST00000087158 Col17a1Q07563 1470 aa11.15□□□□□ -0.62
Trim40-201ENSMUST00000087158 Lmtk2Q3TYD6 1471 aa11.15□□□□□ -0.62
Trim40-201ENSMUST00000087158 Rapgef6Q5NCJ1 1609 aa11.12□□□□□ -0.63
Trim40-201ENSMUST00000087158 Ccnb3Q810T2 1396 aa11.12□□□□□ -0.63
Trim40-201ENSMUST00000087158 BC005561E9Q5E2 1589 aa11.11□□□□□ -0.63
Trim40-201ENSMUST00000087158 Gcc2Q8CHG3 1679 aa11.11□□□□□ -0.63
Trim40-201ENSMUST00000087158 Map3k4O08648 1597 aa11.11□□□□□ -0.63
Trim40-201ENSMUST00000087158 NexmifQ5DTT1 1515 aa11.1□□□□□ -0.63
Trim40-201ENSMUST00000087158 Dnmt1P13864 1620 aaKnown RBP11.1□□□□□ -0.63
Trim40-201ENSMUST00000087158 Mia2Q91ZV0 1396 aa11.09□□□□□ -0.63
Trim40-201ENSMUST00000087158 Mug1P28665 1476 aa11.09□□□□□ -0.63
Trim40-201ENSMUST00000087158 Fam50aQ9WV03 339 aaKnown RBP11.09□□□□□ -0.63
Trim40-201ENSMUST00000087158 Fhad1A6PWD2 1420 aa11.08□□□□□ -0.64
Trim40-201ENSMUST00000087158 Las1lA2BE28 776 aaKnown RBP11.08□□□□□ -0.64
Trim40-201ENSMUST00000087158 Naip2Q9QUK4 1447 aa11.08□□□□□ -0.64
Trim40-201ENSMUST00000087158 Ncoa3O09000 1398 aa11.07□□□□□ -0.64
Trim40-201ENSMUST00000087158 Arhgap31A6X8Z5 1425 aa11.06□□□□□ -0.64
Trim40-201ENSMUST00000087158 A2mQ6GQT1 1474 aa11.06□□□□□ -0.64
Trim40-201ENSMUST00000087158 Fgd6Q69ZL1 1399 aa11.06□□□□□ -0.64
Trim40-201ENSMUST00000087158 TonslQ6NZL6 1363 aa11.06□□□□□ -0.64
Trim40-201ENSMUST00000087158 Arhgef11Q68FM7 1552 aa11.06□□□□□ -0.64
Trim40-201ENSMUST00000087158 Vps8Q0P5W1 1427 aa11.05□□□□□ -0.64
Trim40-201ENSMUST00000087158 Ncoa2Q61026 1462 aa11.05□□□□□ -0.64
Trim40-201ENSMUST00000087158 Hoxd11P23813 323 aa11.04□□□□□ -0.64
Trim40-201ENSMUST00000087158 Sall2Q9QX96 1004 aa11.04□□□□□ -0.64
Trim40-201ENSMUST00000087158 Cdc42bpaQ3UU96 1719 aa11.04□□□□□ -0.64
Trim40-201ENSMUST00000087158 Neo1P97798 1493 aa11.04□□□□□ -0.64
Trim40-201ENSMUST00000087158 Ccer2J3QPU5 274 aa11.03□□□□□ -0.64
Trim40-201ENSMUST00000087158 AcrbpQ3V140 540 aa11.03□□□□□ -0.64
Trim40-201ENSMUST00000087158 Dhx57Q6P5D3 1388 aaKnown RBP11.03□□□□□ -0.64
Trim40-201ENSMUST00000087158 Ccdc141E9Q8Q6 1531 aa11.03□□□□□ -0.64
Trim40-201ENSMUST00000087158 Kiaa1551Q5DTW7 1521 aa11.03□□□□□ -0.64
Trim40-201ENSMUST00000087158 Zcchc11B2RX14 1644 aaKnown RBP11.02□□□□□ -0.65
Trim40-201ENSMUST00000087158 Rrbp1Q99PL5 1605 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms