RNA–Protein interactions for RNA: ENSMUST00000085677.8

Stra6-202, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-202ENSMUST00000085677 Mapk8ip2Q9ERE9 830 aa16.73■□□□□ 0.27
Stra6-202ENSMUST00000085677 Tnnt3Q9QZ47 272 aa16.73■□□□□ 0.27
Stra6-202ENSMUST00000085677 Fam71e1A1L3C1 212 aa16.72■□□□□ 0.27
Stra6-202ENSMUST00000085677 Eea1Q8BL66 1411 aa16.7■□□□□ 0.26
Stra6-202ENSMUST00000085677 Arhgef5E9Q7D5 1581 aa16.69■□□□□ 0.26
Stra6-202ENSMUST00000085677 Grin2bQ01097 1482 aa16.68■□□□□ 0.26
Stra6-202ENSMUST00000085677 Shroom4Q1W617 1475 aa16.68■□□□□ 0.26
Stra6-202ENSMUST00000085677 NrkQ9R0G8 1455 aa16.67■□□□□ 0.26
Stra6-202ENSMUST00000085677 TchhA0A0B4J1F9 1599 aa16.64■□□□□ 0.25
Stra6-202ENSMUST00000085677 Rpap1Q80TE0 1409 aa16.63■□□□□ 0.25
Stra6-202ENSMUST00000085677 Baz1bQ9Z277 1479 aa16.62■□□□□ 0.25
Stra6-202ENSMUST00000085677 Fam135aQ6NS59 1506 aa16.61■□□□□ 0.25
Stra6-202ENSMUST00000085677 Setd5Q5XJV7 1441 aa16.61■□□□□ 0.25
Stra6-202ENSMUST00000085677 LrpprcQ6PB66 1392 aaKnown RBP16.6■□□□□ 0.25
Stra6-202ENSMUST00000085677 Tiam1Q60610 1591 aa16.59■□□□□ 0.25
Stra6-202ENSMUST00000085677 Znf710Q3U288 666 aa16.57■□□□□ 0.24
Stra6-202ENSMUST00000085677 Mroh2bQ7M6Y6 1581 aa16.53■□□□□ 0.24
Stra6-202ENSMUST00000085677 Duox2A2AQ99 1517 aa16.52■□□□□ 0.24
Stra6-202ENSMUST00000085677 Map3k1P53349 1493 aa16.51■□□□□ 0.23
Stra6-202ENSMUST00000085677 PogzQ8BZH4 1409 aaKnown RBP16.51■□□□□ 0.23
Stra6-202ENSMUST00000085677 Dhx29Q6PGC1 1365 aaKnown RBP16.5■□□□□ 0.23
Stra6-202ENSMUST00000085677 AqrQ8CFQ3 1481 aaKnown RBP16.5■□□□□ 0.23
Stra6-202ENSMUST00000085677 Naip1Q9QWK5 1403 aa16.49■□□□□ 0.23
Stra6-202ENSMUST00000085677 Erich3F6QRE9 1637 aa16.49■□□□□ 0.23
Stra6-202ENSMUST00000085677 NclP09405 707 aaKnown RBP16.48■□□□□ 0.23
Stra6-202ENSMUST00000085677 Efcab5A0JP43 1406 aa16.48■□□□□ 0.23
Stra6-202ENSMUST00000085677 Slx4Q6P1D7 1565 aa16.46■□□□□ 0.23
Stra6-202ENSMUST00000085677 BlmO88700 1416 aa16.46■□□□□ 0.23
Stra6-202ENSMUST00000085677 Lmod2Q3UHZ5 550 aa16.46■□□□□ 0.23
Stra6-202ENSMUST00000085677 Anp32aO35381 247 aa16.46■□□□□ 0.22
Stra6-202ENSMUST00000085677 Stra8P70278 393 aa16.46■□□□□ 0.22
Stra6-202ENSMUST00000085677 DiexfQ8BTT6 772 aaKnown RBP16.46■□□□□ 0.22
Stra6-202ENSMUST00000085677 Ankrd26Q811D2 1581 aa16.45■□□□□ 0.22
Stra6-202ENSMUST00000085677 UacaQ8CGB3 1411 aa16.44■□□□□ 0.22
Stra6-202ENSMUST00000085677 Pcf11G3X9Z4 1553 aa16.43■□□□□ 0.22
Stra6-202ENSMUST00000085677 Rad54l2Q99NG0 1466 aa16.43■□□□□ 0.22
Stra6-202ENSMUST00000085677 Bcl11aQ9QYE3 773 aa16.43■□□□□ 0.22
Stra6-202ENSMUST00000085677 Fam50aQ9WV03 339 aaKnown RBP16.43■□□□□ 0.22
Stra6-202ENSMUST00000085677 Mrc2Q64449 1479 aa16.38■□□□□ 0.21
Stra6-202ENSMUST00000085677 Samd9lQ69Z37 1561 aa16.37■□□□□ 0.21
Stra6-202ENSMUST00000085677 Carmil1Q6EDY6 1374 aa16.37■□□□□ 0.21
Stra6-202ENSMUST00000085677 Hspa5P20029 655 aaKnown RBP16.36■□□□□ 0.21
Stra6-202ENSMUST00000085677 Gm13697A2AK42 830 aa16.36■□□□□ 0.21
Stra6-202ENSMUST00000085677 Cux1P53564 1515 aa16.36■□□□□ 0.21
Stra6-202ENSMUST00000085677 Calr4Q3TQS0 420 aa16.35■□□□□ 0.21
Stra6-202ENSMUST00000085677 3425401B19RikD3Z1D3 1412 aa16.35■□□□□ 0.21
Stra6-202ENSMUST00000085677 Kif21aQ9QXL2 1672 aa16.35■□□□□ 0.21
Stra6-202ENSMUST00000085677 Lmo7E9PYF4 1699 aaKnown RBP16.34■□□□□ 0.21
Stra6-202ENSMUST00000085677 Ankrd36D3Z4K0 1415 aa16.34■□□□□ 0.21
Stra6-202ENSMUST00000085677 Nolc1E9Q5C9 702 aaKnown RBP16.34■□□□□ 0.21
Stra6-202ENSMUST00000085677 Fhad1A6PWD2 1420 aa16.31■□□□□ 0.2
Stra6-202ENSMUST00000085677 Crocc2F6XLV1 1638 aa16.29■□□□□ 0.2
Stra6-202ENSMUST00000085677 SynmQ70IV5 1561 aa16.28■□□□□ 0.2
Stra6-202ENSMUST00000085677 Aebp1Q640N1 1128 aa16.28■□□□□ 0.2
Stra6-202ENSMUST00000085677 Plb1Q3TTY0 1478 aa16.28■□□□□ 0.2
Stra6-202ENSMUST00000085677 Smg6P61406 1418 aaKnown RBP16.26■□□□□ 0.19
Stra6-202ENSMUST00000085677 Vps8Q0P5W1 1427 aa16.26■□□□□ 0.19
Stra6-202ENSMUST00000085677 Mia2Q91ZV0 1396 aa16.25■□□□□ 0.19
Stra6-202ENSMUST00000085677 CntlnA2AM05 1397 aa16.24■□□□□ 0.19
Stra6-202ENSMUST00000085677 Camsap2Q8C1B1 1461 aa16.23■□□□□ 0.19
Stra6-202ENSMUST00000085677 Ccer2J3QPU5 274 aa16.23■□□□□ 0.19
Stra6-202ENSMUST00000085677 Sin3aQ60520 1274 aaKnown RBP16.23■□□□□ 0.19
Stra6-202ENSMUST00000085677 Fyco1Q8VDC1 1437 aa16.23■□□□□ 0.19
Stra6-202ENSMUST00000085677 Ncoa2Q61026 1462 aa16.23■□□□□ 0.19
Stra6-202ENSMUST00000085677 Slc24a1Q91WD8 1130 aa16.23■□□□□ 0.19
Stra6-202ENSMUST00000085677 Peg3Q3URU2 1571 aa16.22■□□□□ 0.19
Stra6-202ENSMUST00000085677 Supt16hQ920B9 1047 aa16.2■□□□□ 0.18
Stra6-202ENSMUST00000085677 Urb2E9Q7L1 1524 aaKnown RBP16.2■□□□□ 0.18
Stra6-202ENSMUST00000085677 Rtl5Q5DTT4 599 aa16.19■□□□□ 0.18
Stra6-202ENSMUST00000085677 Naip2Q9QUK4 1447 aa16.19■□□□□ 0.18
Stra6-202ENSMUST00000085677 Ifnlr1Q8CGK5 535 aa16.18■□□□□ 0.18
Stra6-202ENSMUST00000085677 Naip5Q9R016 1403 aa16.18■□□□□ 0.18
Stra6-202ENSMUST00000085677 Pla2r1Q62028 1487 aa16.18■□□□□ 0.18
Stra6-202ENSMUST00000085677 EprsQ8CGC7 1512 aaKnown RBP16.16■□□□□ 0.18
Stra6-202ENSMUST00000085677 Cul7Q8VE73 1689 aa16.16■□□□□ 0.18
Stra6-202ENSMUST00000085677 Magi3Q9EQJ9 1476 aa16.15■□□□□ 0.18
Stra6-202ENSMUST00000085677 Disp1Q3TDN0 1521 aa16.15■□□□□ 0.18
Stra6-202ENSMUST00000085677 Gm7298A0A0N4SVU1 1476 aa16.15■□□□□ 0.18
Stra6-202ENSMUST00000085677 Washc2Q6PGL7 1334 aa16.14■□□□□ 0.17
Stra6-202ENSMUST00000085677 Grin2aP35436 1464 aa16.14■□□□□ 0.17
Stra6-202ENSMUST00000085677 CadpsQ80TJ1 1355 aa16.13■□□□□ 0.17
Stra6-202ENSMUST00000085677 Gm1043A0A140LJC2 1431 aa16.11■□□□□ 0.17
Stra6-202ENSMUST00000085677 A2mQ6GQT1 1474 aa16.11■□□□□ 0.17
Stra6-202ENSMUST00000085677 Dennd4bQ3U1Y4 1499 aa16.11■□□□□ 0.17
Stra6-202ENSMUST00000085677 Pprc1Q6NZN1 1644 aa16.11■□□□□ 0.17
Stra6-202ENSMUST00000085677 Ppp4r2Q0VGB7 417 aa16.1■□□□□ 0.17
Stra6-202ENSMUST00000085677 Wdr43Q6ZQL4 677 aaKnown RBP16.09■□□□□ 0.17
Stra6-202ENSMUST00000085677 Eif5bQ05D44 1216 aaKnown RBP16.09■□□□□ 0.17
Stra6-202ENSMUST00000085677 Arhgap27A2AB59 869 aa16.08■□□□□ 0.16
Stra6-202ENSMUST00000085677 Pelp1Q9DBD5 1123 aaKnown RBP16.08■□□□□ 0.16
Stra6-202ENSMUST00000085677 Ube2uB1AUC4 352 aa16.07■□□□□ 0.16
Stra6-202ENSMUST00000085677 Polr1aO35134 1717 aaKnown RBP16.07■□□□□ 0.16
Stra6-202ENSMUST00000085677 Chic2Q9D9G3 165 aa16.06■□□□□ 0.16
Stra6-202ENSMUST00000085677 Gpatch8A2A6A1 1505 aa16.05■□□□□ 0.16
Stra6-202ENSMUST00000085677 WizO88286 1684 aaKnown RBP16.05■□□□□ 0.16
Stra6-202ENSMUST00000085677 PxdnQ3UQ28 1475 aa16.04■□□□□ 0.16
Stra6-202ENSMUST00000085677 Kif27Q7M6Z4 1394 aa16.03■□□□□ 0.16
Stra6-202ENSMUST00000085677 Fhod3Q76LL6 1578 aa16.03■□□□□ 0.16
Stra6-202ENSMUST00000085677 Mrs2Q5NCE8 434 aa16.03■□□□□ 0.16
Stra6-202ENSMUST00000085677 Setd1bQ8CFT2 1985 aa16.02■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms