RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Htatsf1Q8BGC0 757 aa13.74□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Chic1Q8CBW7 227 aa13.73□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Eid3Q3V124 375 aa13.73□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Ythdc1E9Q5K9 736 aaKnown RBP13.71□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Kdm5dQ62240 1548 aa13.71□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Csrnp3P59055 597 aa13.71□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Crybg2B7ZCC2 1516 aa13.71□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Mbd3Q9Z2D8 285 aaKnown RBP13.71□□□□□ -0.21
Scn8a-201ENSMUST00000082209 Adam1bQ8R534 806 aa13.67□□□□□ -0.22
Scn8a-201ENSMUST00000082209 Arid4bA2CG63 1314 aaKnown RBP13.66□□□□□ -0.22
Scn8a-201ENSMUST00000082209 Mrs2Q5NCE8 434 aa13.65□□□□□ -0.22
Scn8a-201ENSMUST00000082209 CatipB9EKE5 520 aa13.63□□□□□ -0.23
Scn8a-201ENSMUST00000082209 Fmn1Q05860 1466 aa13.63□□□□□ -0.23
Scn8a-201ENSMUST00000082209 Map7O88735 730 aa13.63□□□□□ -0.23
Scn8a-201ENSMUST00000082209 Ppm1gQ61074 542 aa13.63□□□□□ -0.23
Scn8a-201ENSMUST00000082209 Fgd1P52734 960 aa13.62□□□□□ -0.23
Scn8a-201ENSMUST00000082209 Ccdc27Q3V036 639 aa13.62□□□□□ -0.23
Scn8a-201ENSMUST00000082209 IqubQ8CDK3 788 aa13.6□□□□□ -0.23
Scn8a-201ENSMUST00000082209 Kif15Q6P9L6 1387 aa13.59□□□□□ -0.23
Scn8a-201ENSMUST00000082209 Hsp90ab1P11499 724 aaKnown RBP13.58□□□□□ -0.24
Scn8a-201ENSMUST00000082209 Mtus2Q3UHD3 1353 aa13.58□□□□□ -0.24
Scn8a-201ENSMUST00000082209 Cttnbp2B9EJA2 1648 aa13.57□□□□□ -0.24
Scn8a-201ENSMUST00000082209 Zbtb4Q5F293 982 aa13.57□□□□□ -0.24
Scn8a-201ENSMUST00000082209 PtmsQ9D0J8 101 aaKnown RBP13.55□□□□□ -0.24
Scn8a-201ENSMUST00000082209 Ofd1Q80Z25 1017 aa13.54□□□□□ -0.24
Scn8a-201ENSMUST00000082209 Ifnlr1Q8CGK5 535 aa13.54□□□□□ -0.24
Scn8a-201ENSMUST00000082209 DekQ7TNV0 380 aaKnown RBP13.54□□□□□ -0.24
Scn8a-201ENSMUST00000082209 Chic2Q9D9G3 165 aa13.54□□□□□ -0.24
Scn8a-201ENSMUST00000082209 Trim30dE9PWL0 497 aa13.52□□□□□ -0.24
Scn8a-201ENSMUST00000082209 CanxP35564 591 aaKnown RBP13.52□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Iqcf3Q9D498 203 aa13.51□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Mapk8ip2Q9ERE9 830 aa13.51□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Polr1aO35134 1717 aaKnown RBP13.5□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Fhad1A6PWD2 1420 aa13.5□□□□□ -0.25
Scn8a-201ENSMUST00000082209 ArxO35085 564 aa13.5□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Card11Q8CIS0 1159 aa13.5□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Rad21Q61550 635 aaKnown RBP13.49□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Fyco1Q8VDC1 1437 aa13.49□□□□□ -0.25
Scn8a-201ENSMUST00000082209 NudcO35685 332 aaKnown RBP13.48□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Smarca2Q6DIC0 1577 aa13.48□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Pds5bQ4VA53 1446 aaKnown RBP13.48□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Srpk2O54781 681 aaKnown RBP13.47□□□□□ -0.25
Scn8a-201ENSMUST00000082209 KnstrnQ9D9Z1 312 aaKnown RBP13.47□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Arhgap35Q91YM2 1499 aa13.47□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Mapk8ip3Q9ESN9 1337 aa13.46□□□□□ -0.25
Scn8a-201ENSMUST00000082209 Fkbp15Q6P9Q6 1216 aaKnown RBP13.46□□□□□ -0.25
Scn8a-201ENSMUST00000082209 PtmaP26350 111 aa13.46□□□□□ -0.26
Scn8a-201ENSMUST00000082209 Mroh3A0A1D5RM54 893 aa13.45□□□□□ -0.26
Scn8a-201ENSMUST00000082209 Pde3bQ61409 1100 aa13.45□□□□□ -0.26
Scn8a-201ENSMUST00000082209 Prdm10Q3UTQ7 1184 aa13.45□□□□□ -0.26
Scn8a-201ENSMUST00000082209 Rgl3Q3UYI5 709 aa13.45□□□□□ -0.26
Scn8a-201ENSMUST00000082209 Safb2Q80YR5 991 aaKnown RBP13.44□□□□□ -0.26
Scn8a-201ENSMUST00000082209 Exosc9Q9JHI7 438 aaKnown RBP13.42□□□□□ -0.26
Scn8a-201ENSMUST00000082209 4933402E13RikQ9D4D2 429 aa13.41□□□□□ -0.26
Scn8a-201ENSMUST00000082209 MccE9PWI3 1003 aa13.41□□□□□ -0.26
Scn8a-201ENSMUST00000082209 Gm973E9Q295 1059 aa13.39□□□□□ -0.27
Scn8a-201ENSMUST00000082209 HnrnpuQ8VEK3 800 aaKnown RBP13.38□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Rock2P70336 1388 aa13.38□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Znf326O88291 580 aa13.38□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Cux1P53564 1515 aa13.37□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Gm20521D3Z5F7 333 aa13.36□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Rwdd1Q9CQK7 243 aa13.36□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Cep162Q6ZQ06 1403 aa13.36□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Dhx57Q6P5D3 1388 aaKnown RBP13.36□□□□□ -0.27
Scn8a-201ENSMUST00000082209 PnnO35691 725 aaKnown RBP13.36□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Tcerg1Q8CGF7 1100 aaKnown RBP13.36□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Casc1Q6TDU8 730 aa13.35□□□□□ -0.27
Scn8a-201ENSMUST00000082209 CntlnA2AM05 1397 aa13.34□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Sycp2Q9CUU3 1500 aa13.34□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Smarca4Q3TKT4 1613 aaKnown RBP13.33□□□□□ -0.27
Scn8a-201ENSMUST00000082209 AU015836B2RUM3 263 aa13.33□□□□□ -0.27
Scn8a-201ENSMUST00000082209 Wwc2Q6NXJ0 1187 aa13.33□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Fam71e1A1L3C1 212 aa13.33□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Tmf1B9EKI3 1091 aa13.32□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Baz1bQ9Z277 1479 aa13.32□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Calcoco2A2A6M5 331 aa13.32□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Rsph4aQ8BYM7 716 aa13.32□□□□□ -0.28
Scn8a-201ENSMUST00000082209 P3h3Q8CG70 732 aa13.31□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Stard8Q8K031 1019 aa13.31□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Kif27Q7M6Z4 1394 aa13.31□□□□□ -0.28
Scn8a-201ENSMUST00000082209 UacaQ8CGB3 1411 aa13.31□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Eif4g2Q62448 906 aaKnown RBP13.31□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Plcb2A3KGF7 1181 aa13.29□□□□□ -0.28
Scn8a-201ENSMUST00000082209 1700123L14RikQ3V2K7 440 aa13.29□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Plekhh2Q8C115 1491 aa13.29□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Lmod3E9QA62 571 aa13.27□□□□□ -0.28
Scn8a-201ENSMUST00000082209 Arhgap27A2AB59 869 aa13.27□□□□□ -0.28
Scn8a-201ENSMUST00000082209 AampJ3QN89 436 aa13.27□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Irx3P81067 507 aa13.27□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Gm38655A0A286YDK6 273 aa13.27□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Stag3O70576 1240 aa13.27□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Kdm2aP59997 1161 aa13.26□□□□□ -0.29
Scn8a-201ENSMUST00000082209 EspnQ9ET47 871 aa13.26□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Smarce1O54941 411 aaKnown RBP13.25□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Gm6268A2A3U9 297 aa13.25□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Rangap1P46061 589 aaKnown RBP13.24□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Grwd1Q810D6 446 aaKnown RBP13.24□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Cc2d2aQ8CFW7 1633 aa13.24□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Aebp2Q9Z248 504 aaKnown RBP13.24□□□□□ -0.29
Scn8a-201ENSMUST00000082209 Trim26Q99PN3 545 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms